RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 HPDP32754 393 aaPredicted RBP22.85■■□□□ 1.25
CLN6-224ENST00000638076 SSR1P43307 286 aaKnown RBP22.85■■□□□ 1.25
CLN6-224ENST00000638076 RPL7AP62424 266 aaKnown RBP22.85■■□□□ 1.25
CLN6-224ENST00000638076 SLCO2A1Q92959 643 aa22.85■■□□□ 1.25
CLN6-224ENST00000638076 EPB41L4BQ9H329 900 aa22.85■■□□□ 1.25
CLN6-224ENST00000638076 PABPC3Q9H361 631 aaKnown RBP22.85■■□□□ 1.25
CLN6-224ENST00000638076 ZNF408Q9H9D4 720 aa22.85■■□□□ 1.25
CLN6-224ENST00000638076 GPR25O00155 361 aa22.84■■□□□ 1.25
CLN6-224ENST00000638076 PDHXO00330 501 aa22.84■■□□□ 1.25
CLN6-224ENST00000638076 LSM8O95777 96 aaKnown RBP22.84■■□□□ 1.25
CLN6-224ENST00000638076 GH1P01241 217 aa22.84■■□□□ 1.25
CLN6-224ENST00000638076 GJC1P36383 396 aa22.84■■□□□ 1.25
CLN6-224ENST00000638076 PHKA2P46019 1235 aa22.84■■□□□ 1.25
CLN6-224ENST00000638076 IFFO1Q0D2I5 559 aa22.84■■□□□ 1.25
CLN6-224ENST00000638076 MAMDC4Q6UXC1 1216 aa22.84■■□□□ 1.25
CLN6-224ENST00000638076 ART4Q93070 314 aa22.84■■□□□ 1.25
CLN6-224ENST00000638076 HEMGNQ9BXL5 484 aa22.84■■□□□ 1.25
CLN6-224ENST00000638076 LRRC4CQ9HCJ2 640 aa22.84■■□□□ 1.25
CLN6-224ENST00000638076 NXF1Q9UBU9 619 aaKnown RBP22.84■■□□□ 1.25
CLN6-224ENST00000638076 EVPLQ92817 2033 aa22.84■■□□□ 1.25
CLN6-224ENST00000638076 CALB1P05937 261 aa22.83■■□□□ 1.25
CLN6-224ENST00000638076 KRT19P08727 400 aa22.83■■□□□ 1.25
CLN6-224ENST00000638076 RALAP11233 206 aa22.83■■□□□ 1.25
CLN6-224ENST00000638076 KRT17Q04695 432 aa22.83■■□□□ 1.25
CLN6-224ENST00000638076 KRT71Q3SY84 523 aa22.83■■□□□ 1.25
CLN6-224ENST00000638076 TMEM35BQ8NCS4 154 aa22.83■■□□□ 1.25
CLN6-224ENST00000638076 TFAP2BQ92481 460 aa22.83■■□□□ 1.25
CLN6-224ENST00000638076 POLIQ9UNA4 740 aa22.83■■□□□ 1.25
CLN6-224ENST00000638076 A0A087WZ62 844 aa22.83■■□□□ 1.25
CLN6-224ENST00000638076 IL18RAPO95256 599 aa22.83■■□□□ 1.25
CLN6-224ENST00000638076 EIF3BP55884 814 aaKnown RBP22.83■■□□□ 1.25
CLN6-224ENST00000638076 GUCY1A3Q02108 690 aa22.83■■□□□ 1.25
CLN6-224ENST00000638076 MKRN3Q13064 507 aaKnown RBP22.83■■□□□ 1.25
CLN6-224ENST00000638076 SKIDA1Q1XH10 827 aa22.83■■□□□ 1.25
CLN6-224ENST00000638076 KATNAL2Q8IYT4 538 aa22.83■■□□□ 1.25
CLN6-224ENST00000638076 AFG1LQ8WV93 481 aa22.83■■□□□ 1.25
CLN6-224ENST00000638076 FDXACB1Q9BRP7 624 aaPredicted RBP22.83■■□□□ 1.25
CLN6-224ENST00000638076 DCLK3Q9C098 648 aa22.83■■□□□ 1.25
CLN6-224ENST00000638076 RABEP2Q9H5N1 569 aa22.83■■□□□ 1.25
CLN6-224ENST00000638076 VTA1Q9NP79 307 aa22.83■■□□□ 1.25
CLN6-224ENST00000638076 IP6K2Q9UHH9 426 aa22.83■■□□□ 1.25
CLN6-224ENST00000638076 ZNF286BP0CG31 522 aa22.82■■□□□ 1.24
CLN6-224ENST00000638076 AGBL2Q5U5Z8 902 aa22.82■■□□□ 1.24
CLN6-224ENST00000638076 BCAS4Q8TDM0 211 aa22.82■■□□□ 1.24
CLN6-224ENST00000638076 RSPH14Q9UHP6 348 aa22.82■■□□□ 1.24
CLN6-224ENST00000638076 AKT3Q9Y243 479 aa22.82■■□□□ 1.24
CLN6-224ENST00000638076 TMEM191CA6NGB0 347 aa22.82■■□□□ 1.24
CLN6-224ENST00000638076 GLTPD2A6NH11 291 aa22.82■■□□□ 1.24
CLN6-224ENST00000638076 NFICP08651 508 aa22.82■■□□□ 1.24
CLN6-224ENST00000638076 MAN1A1P33908 653 aa22.82■■□□□ 1.24
CLN6-224ENST00000638076 ADCYAP1R1P41586 468 aa22.82■■□□□ 1.24
CLN6-224ENST00000638076 KLF1Q13351 362 aaPredicted RBP22.82■■□□□ 1.24
CLN6-224ENST00000638076 TMEM130Q8N3G9 435 aa22.82■■□□□ 1.24
CLN6-224ENST00000638076 WDTC1Q8N5D0 677 aa22.82■■□□□ 1.24
CLN6-224ENST00000638076 PPTC7Q8NI37 304 aa22.82■■□□□ 1.24
CLN6-224ENST00000638076 RNF25Q96BH1 459 aaPredicted RBP22.82■■□□□ 1.24
CLN6-224ENST00000638076 SIX4Q9UIU6 781 aa22.82■■□□□ 1.24
CLN6-224ENST00000638076 PCDHGC3Q9UN70 934 aa22.82■■□□□ 1.24
CLN6-224ENST00000638076 R3HDM2Q9Y2K5 976 aaKnown RBP22.82■■□□□ 1.24
CLN6-224ENST00000638076 LACTBL1A8MY62 500 aa22.81■■□□□ 1.24
CLN6-224ENST00000638076 ZEB2O60315 1214 aa22.81■■□□□ 1.24
CLN6-224ENST00000638076 SHBGP04278 402 aa22.81■■□□□ 1.24
CLN6-224ENST00000638076 NUDT17P0C025 328 aa22.81■■□□□ 1.24
CLN6-224ENST00000638076 POU5F1BQ06416 359 aa22.81■■□□□ 1.24
CLN6-224ENST00000638076 CALCOCO2Q13137 446 aa22.81■■□□□ 1.24
CLN6-224ENST00000638076 FAM187BQ17R55 369 aa22.81■■□□□ 1.24
CLN6-224ENST00000638076 DENND2CQ68D51 928 aa22.81■■□□□ 1.24
CLN6-224ENST00000638076 MCEEQ96PE7 176 aa22.81■■□□□ 1.24
CLN6-224ENST00000638076 ZNF518BQ9C0D4 1074 aa22.81■■□□□ 1.24
CLN6-224ENST00000638076 BTBD19C9JJ37 291 aa22.81■■□□□ 1.24
CLN6-224ENST00000638076 MAGEB2O15479 319 aa22.81■■□□□ 1.24
CLN6-224ENST00000638076 VTNP04004 478 aa22.81■■□□□ 1.24
CLN6-224ENST00000638076 STAG3L1P0CL83 205 aa22.81■■□□□ 1.24
CLN6-224ENST00000638076 EIF4BP23588 611 aaKnown RBP22.81■■□□□ 1.24
CLN6-224ENST00000638076 RAP1GAPP47736 663 aa22.81■■□□□ 1.24
CLN6-224ENST00000638076 LACTBP83111 547 aaPredicted RBP22.81■■□□□ 1.24
CLN6-224ENST00000638076 AMHR2Q16671 573 aa22.81■■□□□ 1.24
CLN6-224ENST00000638076 DNAJC24Q6P3W2 148 aa22.81■■□□□ 1.24
CLN6-224ENST00000638076 LINC01465Q8N7H1 131 aa22.81■■□□□ 1.24
CLN6-224ENST00000638076 C1orf127Q8N9H9 656 aa22.81■■□□□ 1.24
CLN6-224ENST00000638076 CPB2Q96IY4 423 aa22.81■■□□□ 1.24
CLN6-224ENST00000638076 MS4A4AQ96JQ5 239 aa22.81■■□□□ 1.24
CLN6-224ENST00000638076 OSBPL8Q9BZF1 889 aa22.81■■□□□ 1.24
CLN6-224ENST00000638076 SEMA4AQ9H3S1 761 aa22.81■■□□□ 1.24
CLN6-224ENST00000638076 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.81■■□□□ 1.24
CLN6-224ENST00000638076 NOVA2Q9UNW9 492 aaKnown RBP22.81■■□□□ 1.24
CLN6-224ENST00000638076 TCRBV5S1A1TA0A578 114 aa22.8■■□□□ 1.24
CLN6-224ENST00000638076 YWHAEP62258 255 aaKnown RBP22.8■■□□□ 1.24
CLN6-224ENST00000638076 WDR72Q3MJ13 1102 aa22.8■■□□□ 1.24
CLN6-224ENST00000638076 ODF2Q5BJF6 829 aa22.8■■□□□ 1.24
CLN6-224ENST00000638076 ANKS1BQ7Z6G8 1248 aa22.8■■□□□ 1.24
CLN6-224ENST00000638076 ARFGAP2Q8N6H7 521 aa22.8■■□□□ 1.24
CLN6-224ENST00000638076 EXD1Q8NHP7 514 aa22.8■■□□□ 1.24
CLN6-224ENST00000638076 ASIC3Q9UHC3 531 aa22.8■■□□□ 1.24
CLN6-224ENST00000638076 CEP83Q9Y592 693 aa22.8■■□□□ 1.24
CLN6-224ENST00000638076 IVNS1ABPQ9Y6Y0 642 aa22.8■■□□□ 1.24
CLN6-224ENST00000638076 ANK1P16157 1881 aa22.8■■□□□ 1.24
CLN6-224ENST00000638076 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.8■■□□□ 1.24
CLN6-224ENST00000638076 CETPP11597 493 aa22.8■■□□□ 1.24
CLN6-224ENST00000638076 TMOD1P28289 359 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms