RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 KXD1Q9BQD3 176 aa19.17■□□□□ 0.66
PNKP-230ENST00000638016 RTP3Q9BQQ7 232 aa19.17■□□□□ 0.66
PNKP-230ENST00000638016 PYM1Q9BRP8 204 aaKnown RBP19.17■□□□□ 0.66
PNKP-230ENST00000638016 PDE11AQ9HCR9 933 aa19.17■□□□□ 0.66
PNKP-230ENST00000638016 SERTAD1Q9UHV2 236 aa19.17■□□□□ 0.66
PNKP-230ENST00000638016 FBXL21Q9UKT6 434 aa19.17■□□□□ 0.66
PNKP-230ENST00000638016 CA14Q9ULX7 337 aa19.17■□□□□ 0.66
PNKP-230ENST00000638016 MRPS23Q9Y3D9 190 aaKnown RBP19.17■□□□□ 0.66
PNKP-230ENST00000638016 YIPF1Q9Y548 306 aa19.17■□□□□ 0.66
PNKP-230ENST00000638016 PTPRJQ12913 1337 aa19.17■□□□□ 0.66
PNKP-230ENST00000638016 IL18RAPO95256 599 aa19.16■□□□□ 0.66
PNKP-230ENST00000638016 ODC1P11926 461 aa19.16■□□□□ 0.66
PNKP-230ENST00000638016 POLR2BP30876 1174 aaKnown RBP19.16■□□□□ 0.66
PNKP-230ENST00000638016 EHHADHQ08426 723 aa19.16■□□□□ 0.66
PNKP-230ENST00000638016 PRSS36Q5K4E3 855 aa19.16■□□□□ 0.66
PNKP-230ENST00000638016 FAM26FQ5R3K3 315 aa19.16■□□□□ 0.66
PNKP-230ENST00000638016 EPM2AIP1Q7L775 607 aaPredicted RBP19.16■□□□□ 0.66
PNKP-230ENST00000638016 CBWD2Q8IUF1 395 aa19.16■□□□□ 0.66
PNKP-230ENST00000638016 NELFCDQ8IXH7 590 aa19.16■□□□□ 0.66
PNKP-230ENST00000638016 C1orf127Q8N9H9 656 aa19.16■□□□□ 0.66
PNKP-230ENST00000638016 ATAD1Q8NBU5 361 aa19.16■□□□□ 0.66
PNKP-230ENST00000638016 MFSD1Q9H3U5 465 aa19.16■□□□□ 0.66
PNKP-230ENST00000638016 FAM13BQ9NYF5 915 aa19.16■□□□□ 0.66
PNKP-230ENST00000638016 SLC27A5Q9Y2P5 690 aa19.16■□□□□ 0.66
PNKP-230ENST00000638016 MTMR11A4FU01 709 aa19.15■□□□□ 0.66
PNKP-230ENST00000638016 CYB561D2O14569 222 aa19.15■□□□□ 0.66
PNKP-230ENST00000638016 PI15O43692 258 aa19.15■□□□□ 0.66
PNKP-230ENST00000638016 EXTL3O43909 919 aa19.15■□□□□ 0.66
PNKP-230ENST00000638016 ITGB3P05106 788 aa19.15■□□□□ 0.66
PNKP-230ENST00000638016 PDIA4P13667 645 aaKnown RBP19.15■□□□□ 0.66
PNKP-230ENST00000638016 TAF6P49848 677 aa19.15■□□□□ 0.66
PNKP-230ENST00000638016 DUSP4Q13115 394 aa19.15■□□□□ 0.66
PNKP-230ENST00000638016 WSCD1Q658N2 575 aa19.15■□□□□ 0.66
PNKP-230ENST00000638016 CNNM4Q6P4Q7 775 aa19.15■□□□□ 0.66
PNKP-230ENST00000638016 GPD1LQ8N335 351 aa19.15■□□□□ 0.66
PNKP-230ENST00000638016 CXorf38Q8TB03 319 aa19.15■□□□□ 0.66
PNKP-230ENST00000638016 LEO1Q8WVC0 666 aaPredicted RBP19.15■□□□□ 0.66
PNKP-230ENST00000638016 MTMR12Q9C0I1 747 aa19.15■□□□□ 0.66
PNKP-230ENST00000638016 DNAJC25Q9H1X3 360 aa19.15■□□□□ 0.66
PNKP-230ENST00000638016 TMEM206Q9H813 350 aa19.15■□□□□ 0.66
PNKP-230ENST00000638016 CFAP45Q9UL16 551 aa19.15■□□□□ 0.66
PNKP-230ENST00000638016 KCNH3Q9ULD8 1083 aa19.15■□□□□ 0.66
PNKP-230ENST00000638016 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.15■□□□□ 0.66
PNKP-230ENST00000638016 A0A1B0GVL5 298 aa19.14■□□□□ 0.65
PNKP-230ENST00000638016 OR6C75A6NL08 312 aa19.14■□□□□ 0.65
PNKP-230ENST00000638016 TGFB1I1O43294 461 aa19.14■□□□□ 0.65
PNKP-230ENST00000638016 ACTN4O43707 911 aaKnown RBP19.14■□□□□ 0.65
PNKP-230ENST00000638016 MOSPD3O75425 235 aa19.14■□□□□ 0.65
PNKP-230ENST00000638016 SRFP11831 508 aa19.14■□□□□ 0.65
PNKP-230ENST00000638016 PFKFB1P16118 471 aa19.14■□□□□ 0.65
PNKP-230ENST00000638016 PTPN2P17706 415 aa19.14■□□□□ 0.65
PNKP-230ENST00000638016 GPC5P78333 572 aa19.14■□□□□ 0.65
PNKP-230ENST00000638016 AMPD3Q01432 767 aa19.14■□□□□ 0.65
PNKP-230ENST00000638016 GPR17Q13304 367 aa19.14■□□□□ 0.65
PNKP-230ENST00000638016 ATL3Q6DD88 541 aa19.14■□□□□ 0.65
PNKP-230ENST00000638016 UNC13DQ70J99 1090 aa19.14■□□□□ 0.65
PNKP-230ENST00000638016 RTL10Q7L3V2 364 aa19.14■□□□□ 0.65
PNKP-230ENST00000638016 OR5B17Q8NGF7 314 aa19.14■□□□□ 0.65
PNKP-230ENST00000638016 SCFD1Q8WVM8 642 aa19.14■□□□□ 0.65
PNKP-230ENST00000638016 PLA2G2FQ9BZM2 168 aa19.14■□□□□ 0.65
PNKP-230ENST00000638016 LRRC27Q9C0I9 530 aa19.14■□□□□ 0.65
PNKP-230ENST00000638016 SLC39A2Q9NP94 309 aa19.14■□□□□ 0.65
PNKP-230ENST00000638016 FAM86C1Q9NVL1 165 aa19.14■□□□□ 0.65
PNKP-230ENST00000638016 HSPBP1Q9NZL4 362 aa19.14■□□□□ 0.65
PNKP-230ENST00000638016 SIX4Q9UIU6 781 aa19.14■□□□□ 0.65
PNKP-230ENST00000638016 AGAP1Q9UPQ3 857 aa19.14■□□□□ 0.65
PNKP-230ENST00000638016 CLIC2O15247 247 aa19.13■□□□□ 0.65
PNKP-230ENST00000638016 HCRTO43612 131 aa19.13■□□□□ 0.65
PNKP-230ENST00000638016 CYP11A1P05108 521 aa19.13■□□□□ 0.65
PNKP-230ENST00000638016 MYL4P12829 197 aa19.13■□□□□ 0.65
PNKP-230ENST00000638016 POU5F1Q01860 360 aaKnown RBP19.13■□□□□ 0.65
PNKP-230ENST00000638016 CCDC142Q17RM4 750 aa19.13■□□□□ 0.65
PNKP-230ENST00000638016 ASTLQ6HA08 431 aaPredicted RBP19.13■□□□□ 0.65
PNKP-230ENST00000638016 CENPPQ6IPU0 288 aa19.13■□□□□ 0.65
PNKP-230ENST00000638016 LRRTM3Q86VH5 581 aa19.13■□□□□ 0.65
PNKP-230ENST00000638016 ZNF507Q8TCN5 953 aa19.13■□□□□ 0.65
PNKP-230ENST00000638016 ZSWIM3Q96MP5 696 aa19.13■□□□□ 0.65
PNKP-230ENST00000638016 AGPAT3Q9NRZ7 376 aa19.13■□□□□ 0.65
PNKP-230ENST00000638016 NCANO14594 1321 aa19.12■□□□□ 0.65
PNKP-230ENST00000638016 KPNA7A9QM74 516 aa19.12■□□□□ 0.65
PNKP-230ENST00000638016 EIF3DO15371 548 aaKnown RBP eCLIP19.12■□□□□ 0.65
PNKP-230ENST00000638016 KLRC4O43908 158 aa19.12■□□□□ 0.65
PNKP-230ENST00000638016 LDHAP00338 332 aaKnown RBP19.12■□□□□ 0.65
PNKP-230ENST00000638016 BFSP1Q12934 665 aa19.12■□□□□ 0.65
PNKP-230ENST00000638016 MYBPC2Q14324 1141 aa19.12■□□□□ 0.65
PNKP-230ENST00000638016 SLC39A12Q504Y0 691 aa19.12■□□□□ 0.65
PNKP-230ENST00000638016 PDZD4Q76G19 769 aaPredicted RBP19.12■□□□□ 0.65
PNKP-230ENST00000638016 RDH13Q8NBN7 331 aa19.12■□□□□ 0.65
PNKP-230ENST00000638016 NXPE3Q969Y0 559 aa19.12■□□□□ 0.65
PNKP-230ENST00000638016 SPATA32Q96LK8 384 aa19.12■□□□□ 0.65
PNKP-230ENST00000638016 ZCWPW1Q9H0M4 648 aa19.12■□□□□ 0.65
PNKP-230ENST00000638016 KCNH6Q9H252 994 aa19.12■□□□□ 0.65
PNKP-230ENST00000638016 MAGEF1Q9HAY2 307 aa19.12■□□□□ 0.65
PNKP-230ENST00000638016 GDPD2Q9HCC8 539 aa19.12■□□□□ 0.65
PNKP-230ENST00000638016 ZNF334Q9HCZ1 680 aaPredicted RBP19.12■□□□□ 0.65
PNKP-230ENST00000638016 AVENQ9NQS1 362 aaPredicted RBP19.12■□□□□ 0.65
PNKP-230ENST00000638016 ZFP37Q9Y6Q3 630 aaPredicted RBP19.12■□□□□ 0.65
PNKP-230ENST00000638016 PIEZO1Q92508 2521 aa19.11■□□□□ 0.65
PNKP-230ENST00000638016 H0Y858 1186 aa19.11■□□□□ 0.65
PNKP-230ENST00000638016 KRT19P08727 400 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms