RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 ZNF334Q9HCZ1 680 aaPredicted RBP8.51□□□□□ -1.05
PNKP-229ENST00000637897 TMLHEQ9NVH6 421 aa8.51□□□□□ -1.05
PNKP-229ENST00000637897 KBTBD4Q9NVX7 518 aa8.51□□□□□ -1.05
PNKP-229ENST00000637897 TMEM63CQ9P1W3 806 aa8.51□□□□□ -1.05
PNKP-229ENST00000637897 STK17AQ9UEE5 414 aa8.51□□□□□ -1.05
PNKP-229ENST00000637897 AFF4Q9UHB7 1163 aaKnown RBP8.51□□□□□ -1.05
PNKP-229ENST00000637897 DPP7Q9UHL4 492 aa8.51□□□□□ -1.05
PNKP-229ENST00000637897 UBQLN1Q9UMX0 589 aaKnown RBP8.51□□□□□ -1.05
PNKP-229ENST00000637897 POLIQ9UNA4 740 aa8.51□□□□□ -1.05
PNKP-229ENST00000637897 NME7Q9Y5B8 376 aa8.51□□□□□ -1.05
PNKP-229ENST00000637897 MTMR11A4FU01 709 aa8.5□□□□□ -1.05
PNKP-229ENST00000637897 PROB1E7EW31 1015 aa8.5□□□□□ -1.05
PNKP-229ENST00000637897 ARNTLO00327 626 aa8.5□□□□□ -1.05
PNKP-229ENST00000637897 HCRTO43612 131 aa8.5□□□□□ -1.05
PNKP-229ENST00000637897 TRAPPC3O43617 180 aa8.5□□□□□ -1.05
PNKP-229ENST00000637897 PRPF6O94906 941 aaKnown RBP8.5□□□□□ -1.05
PNKP-229ENST00000637897 CYP11A1P05108 521 aa8.5□□□□□ -1.05
PNKP-229ENST00000637897 DCNP07585 359 aaKnown RBP8.5□□□□□ -1.05
PNKP-229ENST00000637897 STARD6P59095 220 aa8.5□□□□□ -1.05
PNKP-229ENST00000637897 PPP2R3AQ06190 1150 aa8.5□□□□□ -1.05
PNKP-229ENST00000637897 TWF1Q12792 350 aa8.5□□□□□ -1.05
PNKP-229ENST00000637897 DUSP4Q13115 394 aa8.5□□□□□ -1.05
PNKP-229ENST00000637897 OTOGLQ3ZCN5 2332 aa8.5□□□□□ -1.05
PNKP-229ENST00000637897 FAM78AQ5JUQ0 283 aa8.5□□□□□ -1.05
PNKP-229ENST00000637897 STXBP5Q5T5C0 1151 aa8.5□□□□□ -1.05
PNKP-229ENST00000637897 RRAGBQ5VZM2 374 aa8.5□□□□□ -1.05
PNKP-229ENST00000637897 CENPPQ6IPU0 288 aa8.5□□□□□ -1.05
PNKP-229ENST00000637897 LRSAM1Q6UWE0 723 aa8.5□□□□□ -1.05
PNKP-229ENST00000637897 RTL10Q7L3V2 364 aa8.5□□□□□ -1.05
PNKP-229ENST00000637897 APBB1IPQ7Z5R6 666 aaPredicted RBP8.5□□□□□ -1.05
PNKP-229ENST00000637897 PDILTQ8N807 584 aa8.5□□□□□ -1.05
PNKP-229ENST00000637897 SHKBP1Q8TBC3 707 aa8.5□□□□□ -1.05
PNKP-229ENST00000637897 LEO1Q8WVC0 666 aaPredicted RBP8.5□□□□□ -1.05
PNKP-229ENST00000637897 NXPE3Q969Y0 559 aa8.5□□□□□ -1.05
PNKP-229ENST00000637897 SAAL1Q96ER3 474 aa8.5□□□□□ -1.05
PNKP-229ENST00000637897 BICD1Q96G01 975 aa8.5□□□□□ -1.05
PNKP-229ENST00000637897 SENP8Q96LD8 212 aa8.5□□□□□ -1.05
PNKP-229ENST00000637897 PGLYRP2Q96PD5 576 aa8.5□□□□□ -1.05
PNKP-229ENST00000637897 RPF1Q9H9Y2 349 aaKnown RBP8.5□□□□□ -1.05
PNKP-229ENST00000637897 TBC1D17Q9HA65 648 aa8.5□□□□□ -1.05
PNKP-229ENST00000637897 CYP4F11Q9HBI6 524 aa8.5□□□□□ -1.05
PNKP-229ENST00000637897 OLFML3Q9NRN5 406 aa8.5□□□□□ -1.05
PNKP-229ENST00000637897 SIX4Q9UIU6 781 aa8.5□□□□□ -1.05
PNKP-229ENST00000637897 KCNG1Q9UIX4 513 aa8.5□□□□□ -1.05
PNKP-229ENST00000637897 AGO2Q9UKV8 859 aaKnown RBP8.5□□□□□ -1.05
PNKP-229ENST00000637897 KCNH3Q9ULD8 1083 aa8.5□□□□□ -1.05
PNKP-229ENST00000637897 YIPF1Q9Y548 306 aa8.5□□□□□ -1.05
PNKP-229ENST00000637897 NUB1Q9Y5A7 615 aa8.5□□□□□ -1.05
PNKP-229ENST00000637897 FANCMQ8IYD8 2048 aa8.49□□□□□ -1.05
PNKP-229ENST00000637897 GOLGA8IPA6NC78 632 aa8.49□□□□□ -1.05
PNKP-229ENST00000637897 GOLGA8JA6NMD2 632 aa8.49□□□□□ -1.05
PNKP-229ENST00000637897 H0YCG3 227 aa8.49□□□□□ -1.05
PNKP-229ENST00000637897 TGFB1I1O43294 461 aa8.49□□□□□ -1.05
PNKP-229ENST00000637897 PTPN2P17706 415 aa8.49□□□□□ -1.05
PNKP-229ENST00000637897 ATF6P18850 670 aa8.49□□□□□ -1.05
PNKP-229ENST00000637897 TYMPP19971 482 aa8.49□□□□□ -1.05
PNKP-229ENST00000637897 CD72P21854 359 aa8.49□□□□□ -1.05
PNKP-229ENST00000637897 HOXC13P31276 330 aa8.49□□□□□ -1.05
PNKP-229ENST00000637897 NBL1P41271 181 aa8.49□□□□□ -1.05
PNKP-229ENST00000637897 YWHAHQ04917 246 aaPredicted RBP8.49□□□□□ -1.05
PNKP-229ENST00000637897 GPR17Q13304 367 aa8.49□□□□□ -1.05
PNKP-229ENST00000637897 SNW1Q13573 536 aaKnown RBP8.49□□□□□ -1.05
PNKP-229ENST00000637897 WSCD1Q658N2 575 aa8.49□□□□□ -1.05
PNKP-229ENST00000637897 TPGS2Q68CL5 300 aa8.49□□□□□ -1.05
PNKP-229ENST00000637897 ADALQ6DHV7 355 aa8.49□□□□□ -1.05
PNKP-229ENST00000637897 ZNF280DQ6N043 979 aa8.49□□□□□ -1.05
PNKP-229ENST00000637897 PHLDB3Q6NSJ2 640 aa8.49□□□□□ -1.05
PNKP-229ENST00000637897 GAREM2Q75VX8 874 aa8.49□□□□□ -1.05
PNKP-229ENST00000637897 SV2BQ7L1I2 683 aa8.49□□□□□ -1.05
PNKP-229ENST00000637897 EPM2AIP1Q7L775 607 aaPredicted RBP8.49□□□□□ -1.05
PNKP-229ENST00000637897 TMEM150AQ86TG1 271 aa8.49□□□□□ -1.05
PNKP-229ENST00000637897 OSTM1Q86WC4 334 aa8.49□□□□□ -1.05
PNKP-229ENST00000637897 GAS2L3Q86XJ1 694 aa8.49□□□□□ -1.05
PNKP-229ENST00000637897 GPIHBP1Q8IV16 184 aa8.49□□□□□ -1.05
PNKP-229ENST00000637897 BRSK2Q8IWQ3 736 aa8.49□□□□□ -1.05
PNKP-229ENST00000637897 C1orf127Q8N9H9 656 aa8.49□□□□□ -1.05
PNKP-229ENST00000637897 KRI1Q8N9T8 703 aaKnown RBP8.49□□□□□ -1.05
PNKP-229ENST00000637897 DTWD2Q8NBA8 298 aa8.49□□□□□ -1.05
PNKP-229ENST00000637897 STKLD1Q8NE28 680 aa8.49□□□□□ -1.05
PNKP-229ENST00000637897 RIN3Q8TB24 985 aa8.49□□□□□ -1.05
PNKP-229ENST00000637897 FAM212AQ96EL1 285 aa8.49□□□□□ -1.05
PNKP-229ENST00000637897 ASB16Q96NS5 453 aa8.49□□□□□ -1.05
PNKP-229ENST00000637897 PKMYT1Q99640 499 aa8.49□□□□□ -1.05
PNKP-229ENST00000637897 CORO1BQ9BR76 489 aa8.49□□□□□ -1.05
PNKP-229ENST00000637897 TRIM9Q9C026 710 aa8.49□□□□□ -1.05
PNKP-229ENST00000637897 ASB7Q9H672 318 aa8.49□□□□□ -1.05
PNKP-229ENST00000637897 IL21Q9HBE4 155 aa8.49□□□□□ -1.05
PNKP-229ENST00000637897 ARHGEF3Q9NR81 526 aa8.49□□□□□ -1.05
PNKP-229ENST00000637897 SLC27A5Q9Y2P5 690 aa8.49□□□□□ -1.05
PNKP-229ENST00000637897 MRPS23Q9Y3D9 190 aaKnown RBP8.49□□□□□ -1.05
PNKP-229ENST00000637897 C2CD2Q9Y426 696 aa8.49□□□□□ -1.05
PNKP-229ENST00000637897 DNAH14Q0VDD8 3507 aa8.49□□□□□ -1.05
PNKP-229ENST00000637897 SYCE3A1L190 88 aa8.48□□□□□ -1.05
PNKP-229ENST00000637897 H7C4K7 107 aa8.48□□□□□ -1.05
PNKP-229ENST00000637897 SPTLC2O15270 562 aa8.48□□□□□ -1.05
PNKP-229ENST00000637897 PPP6R2O75170 966 aa8.48□□□□□ -1.05
PNKP-229ENST00000637897 XYLBO75191 536 aa8.48□□□□□ -1.05
PNKP-229ENST00000637897 TBCAO75347 108 aaKnown RBP8.48□□□□□ -1.05
PNKP-229ENST00000637897 KRT18P05783 430 aaKnown RBP8.48□□□□□ -1.05
PNKP-229ENST00000637897 VIPR2P41587 438 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms