RNA–Protein interactions for RNA: ENST00000637439.1

CIITA-215, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 850 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-215ENST00000637439 OVOS1Q6IE37 1185 aa19.42■□□□□ 0.7
CIITA-215ENST00000637439 CD302Q8IX05 232 aa19.42■□□□□ 0.7
CIITA-215ENST00000637439 PGLYRP2Q96PD5 576 aa19.42■□□□□ 0.7
CIITA-215ENST00000637439 LRRC3Q9BY71 257 aa19.42■□□□□ 0.7
CIITA-215ENST00000637439 HAPLN2Q9GZV7 340 aa19.42■□□□□ 0.7
CIITA-215ENST00000637439 C8orf33Q9H7E9 229 aaPredicted RBP19.42■□□□□ 0.7
CIITA-215ENST00000637439 HSFX1Q9UBD0 423 aa19.42■□□□□ 0.7
CIITA-215ENST00000637439 A0A1W2PRU2 124 aa19.41■□□□□ 0.7
CIITA-215ENST00000637439 LACTBL1A8MY62 500 aa19.41■□□□□ 0.7
CIITA-215ENST00000637439 ARNTLO00327 626 aa19.41■□□□□ 0.7
CIITA-215ENST00000637439 HNRNPDLO14979 420 aaKnown RBP19.41■□□□□ 0.7
CIITA-215ENST00000637439 OGTO15294 1046 aa19.41■□□□□ 0.7
CIITA-215ENST00000637439 CHRNB1P11230 501 aa19.41■□□□□ 0.7
CIITA-215ENST00000637439 CCNE1P24864 410 aa19.41■□□□□ 0.7
CIITA-215ENST00000637439 ABCD1P33897 745 aa19.41■□□□□ 0.7
CIITA-215ENST00000637439 CXCL12P48061 93 aa19.41■□□□□ 0.7
CIITA-215ENST00000637439 FCHO2Q0JRZ9 810 aa19.41■□□□□ 0.7
CIITA-215ENST00000637439 TMEM119Q4V9L6 283 aa19.41■□□□□ 0.7
CIITA-215ENST00000637439 CENPPQ6IPU0 288 aa19.41■□□□□ 0.7
CIITA-215ENST00000637439 ARMCX5Q6P1M9 558 aa19.41■□□□□ 0.7
CIITA-215ENST00000637439 TMC8Q8IU68 726 aa19.41■□□□□ 0.7
CIITA-215ENST00000637439 AK8Q96MA6 479 aa19.41■□□□□ 0.7
CIITA-215ENST00000637439 PLIN2Q99541 437 aa19.41■□□□□ 0.7
CIITA-215ENST00000637439 KIF2CQ99661 725 aa19.41■□□□□ 0.7
CIITA-215ENST00000637439 RPF1Q9H9Y2 349 aaKnown RBP19.41■□□□□ 0.7
CIITA-215ENST00000637439 CDV3Q9UKY7 258 aaKnown RBP19.41■□□□□ 0.7
CIITA-215ENST00000637439 USP18Q9UMW8 372 aa19.41■□□□□ 0.7
CIITA-215ENST00000637439 VNN2O95498 520 aa19.4■□□□□ 0.7
CIITA-215ENST00000637439 PIGRP01833 764 aa19.4■□□□□ 0.7
CIITA-215ENST00000637439 ADRB2P07550 413 aa19.4■□□□□ 0.7
CIITA-215ENST00000637439 OR4Q2P0C623 313 aa19.4■□□□□ 0.7
CIITA-215ENST00000637439 ODC1P11926 461 aa19.4■□□□□ 0.7
CIITA-215ENST00000637439 TNFSF9P41273 254 aa19.4■□□□□ 0.7
CIITA-215ENST00000637439 KPNA1P52294 538 aaPredicted RBP19.4■□□□□ 0.7
CIITA-215ENST00000637439 ENOX2Q16206 610 aaKnown RBP19.4■□□□□ 0.7
CIITA-215ENST00000637439 ARSHQ5FYA8 562 aa19.4■□□□□ 0.7
CIITA-215ENST00000637439 SPATA1Q5VX52 437 aa19.4■□□□□ 0.7
CIITA-215ENST00000637439 LAIR1Q6GTX8 287 aa19.4■□□□□ 0.7
CIITA-215ENST00000637439 ITIH5Q86UX2 942 aa19.4■□□□□ 0.7
CIITA-215ENST00000637439 SPEM1Q8N4L4 309 aa19.4■□□□□ 0.7
CIITA-215ENST00000637439 DNAJC25Q9H1X3 360 aa19.4■□□□□ 0.7
CIITA-215ENST00000637439 TBX20Q9UMR3 447 aa19.4■□□□□ 0.7
CIITA-215ENST00000637439 NPHP3-ACAD11A0A0J9YXS1 232 aa19.39■□□□□ 0.69
CIITA-215ENST00000637439 DPYSL4O14531 572 aa19.39■□□□□ 0.69
CIITA-215ENST00000637439 ATXN1P54253 815 aaKnown RBP19.39■□□□□ 0.69
CIITA-215ENST00000637439 LILRA4P59901 499 aa19.39■□□□□ 0.69
CIITA-215ENST00000637439 CACNB1Q02641 598 aaPredicted RBP19.39■□□□□ 0.69
CIITA-215ENST00000637439 ARHGAP15Q53QZ3 475 aa19.39■□□□□ 0.69
CIITA-215ENST00000637439 ARID3BQ8IVW6 561 aaPredicted RBP19.39■□□□□ 0.69
CIITA-215ENST00000637439 PSMG2Q969U7 264 aa19.39■□□□□ 0.69
CIITA-215ENST00000637439 CALML4Q96GE6 196 aa19.39■□□□□ 0.69
CIITA-215ENST00000637439 RTKNQ9BST9 563 aa19.39■□□□□ 0.69
CIITA-215ENST00000637439 CRISPLD1Q9H336 500 aa19.39■□□□□ 0.69
CIITA-215ENST00000637439 OBP2AQ9NY56 170 aa19.39■□□□□ 0.69
CIITA-215ENST00000637439 MTMR11A4FU01 709 aa19.38■□□□□ 0.69
CIITA-215ENST00000637439 H3BQV1 296 aa19.38■□□□□ 0.69
CIITA-215ENST00000637439 K7ENM7 598 aa19.38■□□□□ 0.69
CIITA-215ENST00000637439 NCANO14594 1321 aa19.38■□□□□ 0.69
CIITA-215ENST00000637439 FAM189A1O60320 539 aa19.38■□□□□ 0.69
CIITA-215ENST00000637439 LRP3O75074 770 aa19.38■□□□□ 0.69
CIITA-215ENST00000637439 FAM13AO94988 1023 aa19.38■□□□□ 0.69
CIITA-215ENST00000637439 TGM1P22735 817 aa19.38■□□□□ 0.69
CIITA-215ENST00000637439 CNR2P34972 360 aa19.38■□□□□ 0.69
CIITA-215ENST00000637439 TUFMP49411 452 aaKnown RBP19.38■□□□□ 0.69
CIITA-215ENST00000637439 ARHGAP29Q52LW3 1261 aa19.38■□□□□ 0.69
CIITA-215ENST00000637439 DGKKQ5KSL6 1271 aa19.38■□□□□ 0.69
CIITA-215ENST00000637439 DNAJB7Q7Z6W7 309 aaPredicted RBP19.38■□□□□ 0.69
CIITA-215ENST00000637439 GPBP1Q86WP2 473 aa19.38■□□□□ 0.69
CIITA-215ENST00000637439 RALGPS2Q86X27 583 aaPredicted RBP19.38■□□□□ 0.69
CIITA-215ENST00000637439 MYCT1Q8N699 235 aa19.38■□□□□ 0.69
CIITA-215ENST00000637439 FAM200AQ8TCP9 573 aa19.38■□□□□ 0.69
CIITA-215ENST00000637439 RSPRY1Q96DX4 576 aa19.38■□□□□ 0.69
CIITA-215ENST00000637439 SENP8Q96LD8 212 aa19.38■□□□□ 0.69
CIITA-215ENST00000637439 REEP2Q9BRK0 252 aa19.38■□□□□ 0.69
CIITA-215ENST00000637439 MSTO1Q9BUK6 570 aa19.38■□□□□ 0.69
CIITA-215ENST00000637439 ATXN3LQ9H3M9 355 aa19.38■□□□□ 0.69
CIITA-215ENST00000637439 PARVGQ9HBI0 331 aa19.38■□□□□ 0.69
CIITA-215ENST00000637439 SLC27A5Q9Y2P5 690 aa19.38■□□□□ 0.69
CIITA-215ENST00000637439 DERAQ9Y315 318 aa19.38■□□□□ 0.69
CIITA-215ENST00000637439 NCOR2Q9Y618 2525 aa19.38■□□□□ 0.69
CIITA-215ENST00000637439 A0A0B4J269 797 aa19.37■□□□□ 0.69
CIITA-215ENST00000637439 SLC38A8A6NNN8 435 aa19.37■□□□□ 0.69
CIITA-215ENST00000637439 PAPSS2O95340 614 aaPredicted RBP19.37■□□□□ 0.69
CIITA-215ENST00000637439 UBA7P41226 1012 aa19.37■□□□□ 0.69
CIITA-215ENST00000637439 GUCY2FP51841 1108 aa19.37■□□□□ 0.69
CIITA-215ENST00000637439 ZNF131P52739 623 aa19.37■□□□□ 0.69
CIITA-215ENST00000637439 SATB1Q01826 763 aa19.37■□□□□ 0.69
CIITA-215ENST00000637439 TMEM130Q8N3G9 435 aa19.37■□□□□ 0.69
CIITA-215ENST00000637439 ATAD1Q8NBU5 361 aa19.37■□□□□ 0.69
CIITA-215ENST00000637439 FAM212AQ96EL1 285 aa19.37■□□□□ 0.69
CIITA-215ENST00000637439 CPSF3Q9UKF6 684 aaKnown RBP19.37■□□□□ 0.69
CIITA-215ENST00000637439 DSEQ9UL01 958 aa19.37■□□□□ 0.69
CIITA-215ENST00000637439 NUP210Q8TEM1 1887 aaPredicted RBP19.37■□□□□ 0.69
CIITA-215ENST00000637439 MYBPHLA2RUH7 354 aa19.36■□□□□ 0.69
CIITA-215ENST00000637439 SPECC1L-ADORA2AF8WAN1 911 aa19.36■□□□□ 0.69
CIITA-215ENST00000637439 TRAK2O60296 914 aa19.36■□□□□ 0.69
CIITA-215ENST00000637439 CYP11A1P05108 521 aa19.36■□□□□ 0.69
CIITA-215ENST00000637439 KRT18P05783 430 aaKnown RBP19.36■□□□□ 0.69
CIITA-215ENST00000637439 RETP07949 1114 aa19.36■□□□□ 0.69
CIITA-215ENST00000637439 GABRR2P28476 465 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms