RNA–Protein interactions for RNA: ENST00000637100.1

CLN3-255, Transcript of CLN3, battenin, humanhuman

TSL 5 BASIC

Gene CLN3, Length 1,284 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-255ENST00000637100 RILPL1Q5EBL4 403 aa17.88■□□□□ 0.45
CLN3-255ENST00000637100 SPATA1Q5VX52 437 aa17.88■□□□□ 0.45
CLN3-255ENST00000637100 ARL6IP4Q66PJ3 421 aaKnown RBP17.88■□□□□ 0.45
CLN3-255ENST00000637100 LAIR1Q6GTX8 287 aa17.88■□□□□ 0.45
CLN3-255ENST00000637100 GAREM2Q75VX8 874 aa17.88■□□□□ 0.45
CLN3-255ENST00000637100 TMEM130Q8N3G9 435 aa17.88■□□□□ 0.45
CLN3-255ENST00000637100 LRRC3BQ96PB8 259 aa17.88■□□□□ 0.45
CLN3-255ENST00000637100 RTKNQ9BST9 563 aa17.88■□□□□ 0.45
CLN3-255ENST00000637100 C8orf33Q9H7E9 229 aaPredicted RBP17.88■□□□□ 0.45
CLN3-255ENST00000637100 LARSQ9P2J5 1176 aaKnown RBP17.88■□□□□ 0.45
CLN3-255ENST00000637100 ANKFY1Q9P2R3 1169 aa17.88■□□□□ 0.45
CLN3-255ENST00000637100 ODF2LQ9ULJ1 636 aa17.88■□□□□ 0.45
CLN3-255ENST00000637100 TICRRQ7Z2Z1 1910 aa17.88■□□□□ 0.45
CLN3-255ENST00000637100 LACTBL1A8MY62 500 aa17.87■□□□□ 0.45
CLN3-255ENST00000637100 K7ESF4 209 aa17.87■□□□□ 0.45
CLN3-255ENST00000637100 CYP11A1P05108 521 aa17.87■□□□□ 0.45
CLN3-255ENST00000637100 PLA2G4BP0C869 781 aa17.87■□□□□ 0.45
CLN3-255ENST00000637100 CCNE1P24864 410 aa17.87■□□□□ 0.45
CLN3-255ENST00000637100 CNR2P34972 360 aa17.87■□□□□ 0.45
CLN3-255ENST00000637100 CXCL12P48061 93 aa17.87■□□□□ 0.45
CLN3-255ENST00000637100 DUSP4Q13115 394 aa17.87■□□□□ 0.45
CLN3-255ENST00000637100 ENOX2Q16206 610 aaKnown RBP17.87■□□□□ 0.45
CLN3-255ENST00000637100 HAUS6Q7Z4H7 955 aa17.87■□□□□ 0.45
CLN3-255ENST00000637100 PSMG2Q969U7 264 aa17.87■□□□□ 0.45
CLN3-255ENST00000637100 TIMM13Q9Y5L4 95 aaPredicted RBP17.87■□□□□ 0.45
CLN3-255ENST00000637100 A0A0B4J269 797 aa17.86■□□□□ 0.45
CLN3-255ENST00000637100 ANO9A1A5B4 782 aa17.86■□□□□ 0.45
CLN3-255ENST00000637100 MTMR11A4FU01 709 aa17.86■□□□□ 0.45
CLN3-255ENST00000637100 OGTO15294 1046 aa17.86■□□□□ 0.45
CLN3-255ENST00000637100 RETP07949 1114 aa17.86■□□□□ 0.45
CLN3-255ENST00000637100 OR4Q2P0C623 313 aa17.86■□□□□ 0.45
CLN3-255ENST00000637100 HARSP12081 509 aaKnown RBP17.86■□□□□ 0.45
CLN3-255ENST00000637100 TNFSF9P41273 254 aa17.86■□□□□ 0.45
CLN3-255ENST00000637100 EPHB3P54753 998 aa17.86■□□□□ 0.45
CLN3-255ENST00000637100 LILRA4P59901 499 aa17.86■□□□□ 0.45
CLN3-255ENST00000637100 SATB1Q01826 763 aa17.86■□□□□ 0.45
CLN3-255ENST00000637100 RALGPS2Q86X27 583 aaPredicted RBP17.86■□□□□ 0.45
CLN3-255ENST00000637100 ARID3BQ8IVW6 561 aaPredicted RBP17.86■□□□□ 0.45
CLN3-255ENST00000637100 CD302Q8IX05 232 aa17.86■□□□□ 0.45
CLN3-255ENST00000637100 KIF12Q96FN5 646 aa17.86■□□□□ 0.45
CLN3-255ENST00000637100 FIZ1Q96SL8 496 aa17.86■□□□□ 0.45
CLN3-255ENST00000637100 CPSF3Q9UKF6 684 aaKnown RBP17.86■□□□□ 0.45
CLN3-255ENST00000637100 A0A1W2PRU2 124 aa17.85■□□□□ 0.45
CLN3-255ENST00000637100 PIRO00625 290 aa17.85■□□□□ 0.45
CLN3-255ENST00000637100 PPEF2O14830 753 aa17.85■□□□□ 0.45
CLN3-255ENST00000637100 XPOTO43592 962 aaKnown RBP17.85■□□□□ 0.45
CLN3-255ENST00000637100 HRO43593 1189 aa17.85■□□□□ 0.45
CLN3-255ENST00000637100 FGF19O95750 216 aa17.85■□□□□ 0.45
CLN3-255ENST00000637100 TPRP12270 2363 aaKnown RBP17.85■□□□□ 0.45
CLN3-255ENST00000637100 POU5F1Q01860 360 aaKnown RBP17.85■□□□□ 0.45
CLN3-255ENST00000637100 PPP2R3AQ06190 1150 aa17.85■□□□□ 0.45
CLN3-255ENST00000637100 SPAG1Q07617 926 aa17.85■□□□□ 0.45
CLN3-255ENST00000637100 RAD51AP2Q09MP3 1159 aa17.85■□□□□ 0.45
CLN3-255ENST00000637100 DGKKQ5KSL6 1271 aa17.85■□□□□ 0.45
CLN3-255ENST00000637100 DNAJB7Q7Z6W7 309 aaPredicted RBP17.85■□□□□ 0.45
CLN3-255ENST00000637100 LRRC15Q8TF66 581 aa17.85■□□□□ 0.45
CLN3-255ENST00000637100 GMEB2Q9UKD1 530 aa17.85■□□□□ 0.45
CLN3-255ENST00000637100 TBX20Q9UMR3 447 aa17.85■□□□□ 0.45
CLN3-255ENST00000637100 DERAQ9Y315 318 aa17.85■□□□□ 0.45
CLN3-255ENST00000637100 ALDH1A3P47895 512 aa17.84■□□□□ 0.45
CLN3-255ENST00000637100 CCINQ13939 588 aa17.84■□□□□ 0.45
CLN3-255ENST00000637100 LRRC32Q14392 662 aa17.84■□□□□ 0.45
CLN3-255ENST00000637100 ARHGAP29Q52LW3 1261 aa17.84■□□□□ 0.45
CLN3-255ENST00000637100 STXBP5Q5T5C0 1151 aa17.84■□□□□ 0.45
CLN3-255ENST00000637100 OVOS1Q6IE37 1185 aa17.84■□□□□ 0.45
CLN3-255ENST00000637100 SLC39A4Q6P5W5 647 aa17.84■□□□□ 0.45
CLN3-255ENST00000637100 TXNDC11Q6PKC3 985 aa17.84■□□□□ 0.45
CLN3-255ENST00000637100 USP37Q86T82 979 aa17.84■□□□□ 0.45
CLN3-255ENST00000637100 SYNPOQ8N3V7 929 aa17.84■□□□□ 0.45
CLN3-255ENST00000637100 ATAD1Q8NBU5 361 aa17.84■□□□□ 0.45
CLN3-255ENST00000637100 SENP8Q96LD8 212 aa17.84■□□□□ 0.45
CLN3-255ENST00000637100 AK8Q96MA6 479 aa17.84■□□□□ 0.45
CLN3-255ENST00000637100 CCSER1Q9C0I3 900 aa17.84■□□□□ 0.45
CLN3-255ENST00000637100 IL21Q9HBE4 155 aa17.84■□□□□ 0.45
CLN3-255ENST00000637100 STYXL1Q9Y6J8 313 aa17.84■□□□□ 0.45
CLN3-255ENST00000637100 ACACBO00763 2458 aa17.84■□□□□ 0.45
CLN3-255ENST00000637100 ZFHX4Q86UP3 3567 aa17.84■□□□□ 0.45
CLN3-255ENST00000637100 SPTBN2O15020 2390 aa17.84■□□□□ 0.45
CLN3-255ENST00000637100 MYH11P35749 1972 aa17.84■□□□□ 0.45
CLN3-255ENST00000637100 NPHP3-ACAD11A0A0J9YXS1 232 aa17.83■□□□□ 0.44
CLN3-255ENST00000637100 SPECC1L-ADORA2AF8WAN1 911 aa17.83■□□□□ 0.44
CLN3-255ENST00000637100 SLC30A4O14863 429 aa17.83■□□□□ 0.44
CLN3-255ENST00000637100 KRT37O76014 449 aa17.83■□□□□ 0.44
CLN3-255ENST00000637100 CTHP32929 405 aa17.83■□□□□ 0.44
CLN3-255ENST00000637100 GUCY2FP51841 1108 aa17.83■□□□□ 0.44
CLN3-255ENST00000637100 GTF2BQ00403 316 aa17.83■□□□□ 0.44
CLN3-255ENST00000637100 CACNB1Q02641 598 aaPredicted RBP17.83■□□□□ 0.44
CLN3-255ENST00000637100 LONP2Q86WA8 852 aa17.83■□□□□ 0.44
CLN3-255ENST00000637100 TTC9BQ8N6N2 239 aa17.83■□□□□ 0.44
CLN3-255ENST00000637100 CSGALNACT1Q8TDX6 532 aa17.83■□□□□ 0.44
CLN3-255ENST00000637100 PGLYRP2Q96PD5 576 aa17.83■□□□□ 0.44
CLN3-255ENST00000637100 REEP2Q9BRK0 252 aa17.83■□□□□ 0.44
CLN3-255ENST00000637100 ST6GALNAC4Q9H4F1 302 aa17.83■□□□□ 0.44
CLN3-255ENST00000637100 ASB7Q9H672 318 aa17.83■□□□□ 0.44
CLN3-255ENST00000637100 BLOC1S4Q9NUP1 217 aa17.83■□□□□ 0.44
CLN3-255ENST00000637100 CDV3Q9UKY7 258 aaKnown RBP17.83■□□□□ 0.44
CLN3-255ENST00000637100 NUP210Q8TEM1 1887 aaPredicted RBP17.82■□□□□ 0.44
CLN3-255ENST00000637100 LIG4P49917 911 aa17.82■□□□□ 0.44
CLN3-255ENST00000637100 CSRP2Q16527 193 aa17.82■□□□□ 0.44
CLN3-255ENST00000637100 C9orf57Q5W0N0 161 aa17.82■□□□□ 0.44
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