RNA–Protein interactions for RNA: ENST00000637004.1

CACNA1A-235, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,829 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-235ENST00000637004 ALCAMQ13740 583 aa16.44■□□□□ 0.22
CACNA1A-235ENST00000637004 PLEKHG4Q58EX7 1191 aa16.44■□□□□ 0.22
CACNA1A-235ENST00000637004 CCDC62Q6P9F0 684 aa16.44■□□□□ 0.22
CACNA1A-235ENST00000637004 FBXO11Q86XK2 927 aa16.44■□□□□ 0.22
CACNA1A-235ENST00000637004 C12orf56Q8IXR9 622 aa16.44■□□□□ 0.22
CACNA1A-235ENST00000637004 VCX3BQ9H321 246 aa16.44■□□□□ 0.22
CACNA1A-235ENST00000637004 VCX3AQ9NNX9 186 aa16.44■□□□□ 0.22
CACNA1A-235ENST00000637004 AVENQ9NQS1 362 aaPredicted RBP16.44■□□□□ 0.22
CACNA1A-235ENST00000637004 METTL5Q9NRN9 209 aaKnown RBP16.44■□□□□ 0.22
CACNA1A-235ENST00000637004 ARL8BQ9NVJ2 186 aa16.44■□□□□ 0.22
CACNA1A-235ENST00000637004 HEY2Q9UBP5 337 aa16.44■□□□□ 0.22
CACNA1A-235ENST00000637004 ANGPTL2Q9UKU9 493 aa16.44■□□□□ 0.22
CACNA1A-235ENST00000637004 K7ENM7 598 aa16.44■□□□□ 0.22
CACNA1A-235ENST00000637004 ATP2A1O14983 1001 aa16.44■□□□□ 0.22
CACNA1A-235ENST00000637004 DNAJC6O75061 913 aa16.44■□□□□ 0.22
CACNA1A-235ENST00000637004 ZBTB16Q05516 673 aa16.44■□□□□ 0.22
CACNA1A-235ENST00000637004 LRRC23Q53EV4 343 aaPredicted RBP16.44■□□□□ 0.22
CACNA1A-235ENST00000637004 XXYLT1Q8NBI6 393 aa16.44■□□□□ 0.22
CACNA1A-235ENST00000637004 RBM41Q96IZ5 413 aaKnown RBP16.44■□□□□ 0.22
CACNA1A-235ENST00000637004 CCDC17Q96LX7 622 aa16.44■□□□□ 0.22
CACNA1A-235ENST00000637004 TMEM117Q9H0C3 514 aa16.44■□□□□ 0.22
CACNA1A-235ENST00000637004 PCMTD2Q9NV79 361 aa16.44■□□□□ 0.22
CACNA1A-235ENST00000637004 ZBTB39O15060 712 aa16.43■□□□□ 0.22
CACNA1A-235ENST00000637004 CHMP2AO43633 222 aa16.43■□□□□ 0.22
CACNA1A-235ENST00000637004 KRT4P19013 534 aa16.43■□□□□ 0.22
CACNA1A-235ENST00000637004 GSTT1P30711 240 aa16.43■□□□□ 0.22
CACNA1A-235ENST00000637004 PPP2R5CQ13362 524 aa16.43■□□□□ 0.22
CACNA1A-235ENST00000637004 KRT72Q14CN4 511 aa16.43■□□□□ 0.22
CACNA1A-235ENST00000637004 CLEC16AQ2KHT3 1053 aa16.43■□□□□ 0.22
CACNA1A-235ENST00000637004 C1orf220Q5T0J3 134 aa16.43■□□□□ 0.22
CACNA1A-235ENST00000637004 SLFN13Q68D06 897 aa16.43■□□□□ 0.22
CACNA1A-235ENST00000637004 SDCCAG8Q86SQ7 713 aaPredicted RBP16.43■□□□□ 0.22
CACNA1A-235ENST00000637004 PDCD7Q8N8D1 485 aaKnown RBP16.43■□□□□ 0.22
CACNA1A-235ENST00000637004 TRIM11Q96F44 468 aa16.43■□□□□ 0.22
CACNA1A-235ENST00000637004 OSBPL8Q9BZF1 889 aa16.43■□□□□ 0.22
CACNA1A-235ENST00000637004 MTO1Q9Y2Z2 717 aaKnown RBP16.43■□□□□ 0.22
CACNA1A-235ENST00000637004 A0A0G2JND7 137 aa16.43■□□□□ 0.22
CACNA1A-235ENST00000637004 C6orf229H3BNL8 230 aa16.43■□□□□ 0.22
CACNA1A-235ENST00000637004 DNALI1O14645 258 aaPredicted RBP16.43■□□□□ 0.22
CACNA1A-235ENST00000637004 FGFR1P11362 822 aa16.43■□□□□ 0.22
CACNA1A-235ENST00000637004 ADSSP30520 456 aa16.43■□□□□ 0.22
CACNA1A-235ENST00000637004 MAPK6Q16659 721 aa16.43■□□□□ 0.22
CACNA1A-235ENST00000637004 RASIP1Q5U651 963 aa16.43■□□□□ 0.22
CACNA1A-235ENST00000637004 FAM81AQ8TBF8 368 aa16.43■□□□□ 0.22
CACNA1A-235ENST00000637004 DTX3LQ8TDB6 740 aa16.43■□□□□ 0.22
CACNA1A-235ENST00000637004 RPGRQ92834 1020 aaKnown RBP16.43■□□□□ 0.22
CACNA1A-235ENST00000637004 VPS11Q9H270 941 aa16.43■□□□□ 0.22
CACNA1A-235ENST00000637004 DDX43Q9NXZ2 648 aaKnown RBP16.43■□□□□ 0.22
CACNA1A-235ENST00000637004 H0YIN7 160 aa16.42■□□□□ 0.22
CACNA1A-235ENST00000637004 NDC80O14777 642 aa16.42■□□□□ 0.22
CACNA1A-235ENST00000637004 PSTPIP1O43586 416 aa16.42■□□□□ 0.22
CACNA1A-235ENST00000637004 UFL1O94874 794 aa16.42■□□□□ 0.22
CACNA1A-235ENST00000637004 ESRRAP11474 423 aaPredicted RBP16.42■□□□□ 0.22
CACNA1A-235ENST00000637004 PSMC4P43686 418 aa16.42■□□□□ 0.22
CACNA1A-235ENST00000637004 ARFIP2P53365 341 aa16.42■□□□□ 0.22
CACNA1A-235ENST00000637004 CCNJLQ8IV13 435 aa16.42■□□□□ 0.22
CACNA1A-235ENST00000637004 SMC1BQ8NDV3 1235 aa16.42■□□□□ 0.22
CACNA1A-235ENST00000637004 RFWD2Q8NHY2 731 aa16.42■□□□□ 0.22
CACNA1A-235ENST00000637004 ACCSQ96QU6 501 aa16.42■□□□□ 0.22
CACNA1A-235ENST00000637004 IWS1Q96ST2 819 aa16.42■□□□□ 0.22
CACNA1A-235ENST00000637004 A0A1W2PPM1 405 aa16.42■□□□□ 0.22
CACNA1A-235ENST00000637004 ARHGEF35A5YM69 484 aa16.42■□□□□ 0.22
CACNA1A-235ENST00000637004 TM9SF1O15321 606 aa16.42■□□□□ 0.22
CACNA1A-235ENST00000637004 HLA-DOAP06340 250 aa16.42■□□□□ 0.22
CACNA1A-235ENST00000637004 BMP3P12645 472 aa16.42■□□□□ 0.22
CACNA1A-235ENST00000637004 PRELPP51888 382 aa16.42■□□□□ 0.22
CACNA1A-235ENST00000637004 SH3BGRP55822 239 aaPredicted RBP16.42■□□□□ 0.22
CACNA1A-235ENST00000637004 TBC1D25Q3MII6 688 aa16.42■□□□□ 0.22
CACNA1A-235ENST00000637004 USH1GQ495M9 461 aa16.42■□□□□ 0.22
CACNA1A-235ENST00000637004 RHOT1Q8IXI2 618 aa16.42■□□□□ 0.22
CACNA1A-235ENST00000637004 MAK16Q9BXY0 300 aaKnown RBP16.42■□□□□ 0.22
CACNA1A-235ENST00000637004 KANSL3Q9P2N6 904 aa16.42■□□□□ 0.22
CACNA1A-235ENST00000637004 SLC4A7Q9Y6M7 1214 aa16.42■□□□□ 0.22
CACNA1A-235ENST00000637004 NUMBLQ9Y6R0 609 aa16.42■□□□□ 0.22
CACNA1A-235ENST00000637004 UMODL1Q5DID0 1318 aa16.42■□□□□ 0.22
CACNA1A-235ENST00000637004 IGLV3-22A0A075B6J6 115 aa16.41■□□□□ 0.22
CACNA1A-235ENST00000637004 PDLIM1O00151 329 aa16.41■□□□□ 0.22
CACNA1A-235ENST00000637004 ALOX15BO15296 676 aa16.41■□□□□ 0.22
CACNA1A-235ENST00000637004 PSMD10O75832 226 aa16.41■□□□□ 0.22
CACNA1A-235ENST00000637004 FDX1P10109 184 aa16.41■□□□□ 0.22
CACNA1A-235ENST00000637004 ATP2B4P23634 1241 aa16.41■□□□□ 0.22
CACNA1A-235ENST00000637004 ADRA1DP25100 572 aa16.41■□□□□ 0.22
CACNA1A-235ENST00000637004 GEMIN4P57678 1058 aaKnown RBP16.41■□□□□ 0.22
CACNA1A-235ENST00000637004 CENPUQ71F23 418 aa16.41■□□□□ 0.22
CACNA1A-235ENST00000637004 WDR60Q8WVS4 1066 aa16.41■□□□□ 0.22
CACNA1A-235ENST00000637004 DDX1Q92499 740 aaKnown RBP16.41■□□□□ 0.22
CACNA1A-235ENST00000637004 ALKBH8Q96BT7 664 aaKnown RBP16.41■□□□□ 0.22
CACNA1A-235ENST00000637004 MANSC1Q9H8J5 431 aa16.41■□□□□ 0.22
CACNA1A-235ENST00000637004 TAS2R1Q9NYW7 299 aa16.41■□□□□ 0.22
CACNA1A-235ENST00000637004 HSPBP1Q9NZL4 362 aa16.41■□□□□ 0.22
CACNA1A-235ENST00000637004 FETUBQ9UGM5 382 aa16.41■□□□□ 0.22
CACNA1A-235ENST00000637004 F8W8V4 182 aa16.41■□□□□ 0.22
CACNA1A-235ENST00000637004 GRIN3BO60391 1043 aa16.41■□□□□ 0.22
CACNA1A-235ENST00000637004 LYNP07948 512 aa16.41■□□□□ 0.22
CACNA1A-235ENST00000637004 CDK16Q00536 496 aa16.41■□□□□ 0.22
CACNA1A-235ENST00000637004 MORF4L2Q15014 288 aa16.41■□□□□ 0.22
CACNA1A-235ENST00000637004 MCOLN2Q8IZK6 566 aa16.41■□□□□ 0.22
CACNA1A-235ENST00000637004 MKL1Q969V6 931 aa16.41■□□□□ 0.22
CACNA1A-235ENST00000637004 AZIN2Q96A70 460 aa16.41■□□□□ 0.22
CACNA1A-235ENST00000637004 FAM118BQ9BPY3 351 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms