RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 MRPL38Q96DV4 380 aaKnown RBP17.18■□□□□ 0.34
CLN6-216ENST00000636876 B3GALT6Q96L58 329 aa17.18■□□□□ 0.34
CLN6-216ENST00000636876 PI4K2AQ9BTU6 479 aa17.18■□□□□ 0.34
CLN6-216ENST00000636876 SNX9Q9Y5X1 595 aa17.18■□□□□ 0.34
CLN6-216ENST00000636876 GTPBP10A4D1E9 387 aaKnown RBP17.17■□□□□ 0.34
CLN6-216ENST00000636876 HUS1O60921 280 aa17.17■□□□□ 0.34
CLN6-216ENST00000636876 CLSTN1O94985 981 aa17.17■□□□□ 0.34
CLN6-216ENST00000636876 CYP11A1P05108 521 aa17.17■□□□□ 0.34
CLN6-216ENST00000636876 TYMPP19971 482 aa17.17■□□□□ 0.34
CLN6-216ENST00000636876 TNNC1P63316 161 aa17.17■□□□□ 0.34
CLN6-216ENST00000636876 NOP14P78316 857 aaKnown RBP17.17■□□□□ 0.34
CLN6-216ENST00000636876 PTPROQ16827 1216 aa17.17■□□□□ 0.34
CLN6-216ENST00000636876 KIAA0319Q5VV43 1072 aa17.17■□□□□ 0.34
CLN6-216ENST00000636876 SPOPLQ6IQ16 392 aa17.17■□□□□ 0.34
CLN6-216ENST00000636876 PDE12Q6L8Q7 609 aaKnown RBP17.17■□□□□ 0.34
CLN6-216ENST00000636876 KIAA1841Q6NSI8 718 aa17.17■□□□□ 0.34
CLN6-216ENST00000636876 LIMS2Q7Z4I7 341 aa17.17■□□□□ 0.34
CLN6-216ENST00000636876 GPR65Q8IYL9 337 aa17.17■□□□□ 0.34
CLN6-216ENST00000636876 CCDC150Q8NCX0 1101 aa17.17■□□□□ 0.34
CLN6-216ENST00000636876 AUTS2Q8WXX7 1259 aa17.17■□□□□ 0.34
CLN6-216ENST00000636876 RIN2Q8WYP3 895 aaPredicted RBP17.17■□□□□ 0.34
CLN6-216ENST00000636876 PIK3R5Q8WYR1 880 aa17.17■□□□□ 0.34
CLN6-216ENST00000636876 TCF25Q9BQ70 676 aa17.17■□□□□ 0.34
CLN6-216ENST00000636876 INTS2Q9H0H0 1204 aaKnown RBP17.17■□□□□ 0.34
CLN6-216ENST00000636876 APOBEC3GQ9HC16 384 aaKnown RBP17.17■□□□□ 0.34
CLN6-216ENST00000636876 NGRNQ9NPE2 291 aaKnown RBP17.17■□□□□ 0.34
CLN6-216ENST00000636876 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.17■□□□□ 0.341e-6■■■■■ 74.5
CLN6-216ENST00000636876 ENTPD7Q9NQZ7 604 aa17.17■□□□□ 0.34
CLN6-216ENST00000636876 NXF1Q9UBU9 619 aaKnown RBP17.17■□□□□ 0.34
CLN6-216ENST00000636876 DSEQ9UL01 958 aa17.17■□□□□ 0.34
CLN6-216ENST00000636876 L1RE1Q9UN81 338 aa17.17■□□□□ 0.34
CLN6-216ENST00000636876 POLIQ9UNA4 740 aa17.17■□□□□ 0.34
CLN6-216ENST00000636876 TIMM13Q9Y5L4 95 aaPredicted RBP17.17■□□□□ 0.34
CLN6-216ENST00000636876 PRUNE2Q8WUY3 3088 aa17.16■□□□□ 0.34
CLN6-216ENST00000636876 LGALS16A8MUM7 142 aa17.16■□□□□ 0.34
CLN6-216ENST00000636876 CSPG5O95196 566 aa17.16■□□□□ 0.34
CLN6-216ENST00000636876 CXCL14O95715 111 aa17.16■□□□□ 0.34
CLN6-216ENST00000636876 P4HA1P13674 534 aa17.16■□□□□ 0.34
CLN6-216ENST00000636876 IRS1P35568 1242 aa17.16■□□□□ 0.34
CLN6-216ENST00000636876 SMC1AQ14683 1233 aaKnown RBP17.16■□□□□ 0.34
CLN6-216ENST00000636876 BMS1Q14692 1282 aaKnown RBP17.16■□□□□ 0.34
CLN6-216ENST00000636876 PTPN14Q15678 1187 aa17.16■□□□□ 0.34
CLN6-216ENST00000636876 WDR44Q5JSH3 913 aa17.16■□□□□ 0.34
CLN6-216ENST00000636876 VARS2Q5ST30 1063 aaKnown RBP17.16■□□□□ 0.34
CLN6-216ENST00000636876 PLPP4Q5VZY2 271 aa17.16■□□□□ 0.34
CLN6-216ENST00000636876 WSCD1Q658N2 575 aa17.16■□□□□ 0.34
CLN6-216ENST00000636876 PDXDC1Q6P996 788 aa17.16■□□□□ 0.34
CLN6-216ENST00000636876 GBP6Q6ZN66 633 aa17.16■□□□□ 0.34
CLN6-216ENST00000636876 DPH6Q7L8W6 267 aa17.16■□□□□ 0.34
CLN6-216ENST00000636876 GAS2L3Q86XJ1 694 aa17.16■□□□□ 0.34
CLN6-216ENST00000636876 PDCL2Q8N4E4 241 aa17.16■□□□□ 0.34
CLN6-216ENST00000636876 TOP6BLQ8N6T0 577 aa17.16■□□□□ 0.34
CLN6-216ENST00000636876 EHBP1Q8NDI1 1231 aa17.16■□□□□ 0.34
CLN6-216ENST00000636876 LMO3Q8TAP4 145 aa17.16■□□□□ 0.34
CLN6-216ENST00000636876 MMS19Q96T76 1030 aa17.16■□□□□ 0.34
CLN6-216ENST00000636876 CRACR2AQ9BSW2 395 aa17.16■□□□□ 0.34
CLN6-216ENST00000636876 NIF3L1Q9GZT8 377 aa17.16■□□□□ 0.34
CLN6-216ENST00000636876 MRPL17Q9NRX2 175 aaKnown RBP17.16■□□□□ 0.34
CLN6-216ENST00000636876 LMCD1Q9NZU5 365 aa17.16■□□□□ 0.34
CLN6-216ENST00000636876 GCNT4Q9P109 453 aa17.16■□□□□ 0.34
CLN6-216ENST00000636876 SSX2IPQ9Y2D8 614 aa17.16■□□□□ 0.34
CLN6-216ENST00000636876 PCDHGC5Q9Y5F6 944 aa17.16■□□□□ 0.34
CLN6-216ENST00000636876 C2CD2LO14523 706 aa17.15■□□□□ 0.34
CLN6-216ENST00000636876 LILRB3O75022 631 aa17.15■□□□□ 0.34
CLN6-216ENST00000636876 YWHAHQ04917 246 aaPredicted RBP17.15■□□□□ 0.34
CLN6-216ENST00000636876 MRPL58Q14197 206 aaKnown RBP17.15■□□□□ 0.34
CLN6-216ENST00000636876 ADGRE1Q14246 886 aa17.15■□□□□ 0.34
CLN6-216ENST00000636876 PSMD5Q16401 504 aa17.15■□□□□ 0.34
CLN6-216ENST00000636876 EXOC3L4Q17RC7 722 aa17.15■□□□□ 0.34
CLN6-216ENST00000636876 SOWAHAQ2M3V2 549 aa17.15■□□□□ 0.34
CLN6-216ENST00000636876 PRSS55Q6UWB4 352 aaPredicted RBP17.15■□□□□ 0.34
CLN6-216ENST00000636876 SCARA5Q6ZMJ2 495 aa17.15■□□□□ 0.34
CLN6-216ENST00000636876 ANKS3Q6ZW76 656 aa17.15■□□□□ 0.34
CLN6-216ENST00000636876 METTL23Q86XA0 190 aa17.15■□□□□ 0.34
CLN6-216ENST00000636876 TMEM86AQ8N2M4 240 aa17.15■□□□□ 0.34
CLN6-216ENST00000636876 MRPL43Q8N983 215 aaKnown RBP17.15■□□□□ 0.34
CLN6-216ENST00000636876 LNX1Q8TBB1 728 aaPredicted RBP17.15■□□□□ 0.34
CLN6-216ENST00000636876 SPATA18Q8TC71 538 aa17.15■□□□□ 0.34
CLN6-216ENST00000636876 MICAL1Q8TDZ2 1067 aa17.15■□□□□ 0.34
CLN6-216ENST00000636876 FAXDC2Q96IV6 333 aa17.15■□□□□ 0.34
CLN6-216ENST00000636876 SMYD3Q9H7B4 428 aa17.15■□□□□ 0.34
CLN6-216ENST00000636876 IRAK3Q9Y616 596 aa17.15■□□□□ 0.34
CLN6-216ENST00000636876 ATG2AQ2TAZ0 1938 aa17.15■□□□□ 0.34
CLN6-216ENST00000636876 PRRC2BQ5JSZ5 2229 aaKnown RBP17.15■□□□□ 0.34
CLN6-216ENST00000636876 TSC2P49815 1807 aa17.14■□□□□ 0.34
CLN6-216ENST00000636876 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.14■□□□□ 0.33
CLN6-216ENST00000636876 C2orf71A6NGG8 1288 aa17.14■□□□□ 0.33
CLN6-216ENST00000636876 H7C4K7 107 aa17.14■□□□□ 0.33
CLN6-216ENST00000636876 OAZ2O95190 189 aa17.14■□□□□ 0.33
CLN6-216ENST00000636876 FAM163BP0C2L3 166 aa17.14■□□□□ 0.33
CLN6-216ENST00000636876 POU3F3P20264 500 aaPredicted RBP17.14■□□□□ 0.33
CLN6-216ENST00000636876 ASPAP45381 313 aa17.14■□□□□ 0.33
CLN6-216ENST00000636876 FANCCQ00597 558 aa17.14■□□□□ 0.33
CLN6-216ENST00000636876 CREMQ03060 361 aa17.14■□□□□ 0.33
CLN6-216ENST00000636876 FKBP15Q5T1M5 1219 aa17.14■□□□□ 0.33
CLN6-216ENST00000636876 OVOS1Q6IE37 1185 aa17.14■□□□□ 0.33
CLN6-216ENST00000636876 ADGRF2Q8IZF7 708 aa17.14■□□□□ 0.33
CLN6-216ENST00000636876 KBTBD7Q8WVZ9 684 aa17.14■□□□□ 0.33
CLN6-216ENST00000636876 TATDN2Q93075 761 aa17.14■□□□□ 0.33
CLN6-216ENST00000636876 NT5C1BQ96P26 610 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms