RNA–Protein interactions for RNA: ENST00000636661.1

CLCN2-215, Transcript of chloride voltage-gated channel 2, humanhuman

TSL 5

Gene CLCN2, Length 4,378 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2-215ENST00000636661 DLG4P78352 724 aa17.18■□□□□ 0.34
CLCN2-215ENST00000636661 HABP4Q5JVS0 413 aaKnown RBP17.18■□□□□ 0.34
CLCN2-215ENST00000636661 RNF139Q8WU17 664 aa17.18■□□□□ 0.34
CLCN2-215ENST00000636661 PGBD4Q96DM1 585 aa17.18■□□□□ 0.34
CLCN2-215ENST00000636661 GTSE1Q9NYZ3 720 aa17.18■□□□□ 0.34
CLCN2-215ENST00000636661 PCDHGC5Q9Y5F6 944 aa17.18■□□□□ 0.34
CLCN2-215ENST00000636661 UBOX5O94941 541 aa17.18■□□□□ 0.34
CLCN2-215ENST00000636661 MOCS2O96007 188 aaPredicted RBP17.18■□□□□ 0.34
CLCN2-215ENST00000636661 FDX1P10109 184 aa17.18■□□□□ 0.34
CLCN2-215ENST00000636661 ARL13BQ3SXY8 428 aa17.18■□□□□ 0.34
CLCN2-215ENST00000636661 SCN4BQ8IWT1 228 aa17.18■□□□□ 0.34
CLCN2-215ENST00000636661 RARAP10276 462 aa17.17■□□□□ 0.34
CLCN2-215ENST00000636661 GZMAP12544 262 aa17.17■□□□□ 0.34
CLCN2-215ENST00000636661 CAPRIN2Q6IMN6 1127 aaKnown RBP17.17■□□□□ 0.34
CLCN2-215ENST00000636661 TRIM67Q6ZTA4 783 aa17.17■□□□□ 0.34
CLCN2-215ENST00000636661 NIF3L1Q9GZT8 377 aa17.17■□□□□ 0.34
CLCN2-215ENST00000636661 ANLNQ9NQW6 1124 aa17.17■□□□□ 0.34
CLCN2-215ENST00000636661 METTL5Q9NRN9 209 aaKnown RBP17.17■□□□□ 0.34
CLCN2-215ENST00000636661 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.17■□□□□ 0.34
CLCN2-215ENST00000636661 VIRMAQ69YN4 1812 aaKnown RBP17.17■□□□□ 0.34
CLCN2-215ENST00000636661 LOC100653049A0A140TA62 436 aa17.17■□□□□ 0.34
CLCN2-215ENST00000636661 APOL1O14791 398 aa17.17■□□□□ 0.34
CLCN2-215ENST00000636661 KRT34O76011 436 aa17.17■□□□□ 0.34
CLCN2-215ENST00000636661 ZWINTO95229 277 aa17.17■□□□□ 0.34
CLCN2-215ENST00000636661 ATXN3P54252 364 aaPredicted RBP17.17■□□□□ 0.34
CLCN2-215ENST00000636661 ZNF200P98182 395 aaPredicted RBP17.17■□□□□ 0.34
CLCN2-215ENST00000636661 IL1RL1Q01638 556 aa17.17■□□□□ 0.34
CLCN2-215ENST00000636661 TAF1BQ53T94 588 aaPredicted RBP17.17■□□□□ 0.34
CLCN2-215ENST00000636661 MROH9Q5TGP6 573 aa17.17■□□□□ 0.34
CLCN2-215ENST00000636661 BEST2Q8NFU1 509 aa17.17■□□□□ 0.34
CLCN2-215ENST00000636661 ELP3Q9H9T3 547 aa17.17■□□□□ 0.34
CLCN2-215ENST00000636661 MYCP01106 439 aaPredicted RBP17.17■□□□□ 0.34
CLCN2-215ENST00000636661 ELF1P32519 619 aa17.17■□□□□ 0.34
CLCN2-215ENST00000636661 NLRP11P59045 1033 aaKnown RBP17.17■□□□□ 0.34
CLCN2-215ENST00000636661 KRT80Q6KB66 452 aa17.17■□□□□ 0.34
CLCN2-215ENST00000636661 CERS5Q8N5B7 392 aa17.17■□□□□ 0.34
CLCN2-215ENST00000636661 NCAPGQ9BPX3 1015 aa17.17■□□□□ 0.34
CLCN2-215ENST00000636661 MYOZ2Q9NPC6 264 aa17.17■□□□□ 0.34
CLCN2-215ENST00000636661 CTCFP49711 727 aaPredicted RBP17.17■□□□□ 0.34
CLCN2-215ENST00000636661 PPP3CAQ08209 521 aa17.17■□□□□ 0.34
CLCN2-215ENST00000636661 METTL23Q86XA0 190 aa17.17■□□□□ 0.34
CLCN2-215ENST00000636661 CXorf56Q9H5V9 222 aa17.17■□□□□ 0.34
CLCN2-215ENST00000636661 HAO1Q9UJM8 370 aa17.17■□□□□ 0.34
CLCN2-215ENST00000636661 GTPBP10A4D1E9 387 aaKnown RBP17.16■□□□□ 0.34
CLCN2-215ENST00000636661 CLMNQ96JQ2 1002 aa17.16■□□□□ 0.34
CLCN2-215ENST00000636661 SERPINB12Q96P63 405 aa17.16■□□□□ 0.34
CLCN2-215ENST00000636661 TRIM56Q9BRZ2 755 aaKnown RBP17.16■□□□□ 0.34
CLCN2-215ENST00000636661 NEMP1O14524 444 aa17.16■□□□□ 0.34
CLCN2-215ENST00000636661 MARCKSL1P49006 195 aa17.16■□□□□ 0.34
CLCN2-215ENST00000636661 TAP1Q03518 808 aa17.16■□□□□ 0.34
CLCN2-215ENST00000636661 SYTL5Q8TDW5 730 aaPredicted RBP17.16■□□□□ 0.34
CLCN2-215ENST00000636661 FAM111AQ96PZ2 611 aa17.16■□□□□ 0.34
CLCN2-215ENST00000636661 THTPAQ9BU02 230 aa17.16■□□□□ 0.34
CLCN2-215ENST00000636661 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.16■□□□□ 0.34
CLCN2-215ENST00000636661 MEIS2O14770 477 aa17.16■□□□□ 0.34
CLCN2-215ENST00000636661 RARBP10826 455 aa17.16■□□□□ 0.34
CLCN2-215ENST00000636661 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.16■□□□□ 0.34
CLCN2-215ENST00000636661 NDUFAF2Q8N183 169 aa17.16■□□□□ 0.34
CLCN2-215ENST00000636661 FAM163AQ96GL9 167 aaPredicted RBP17.16■□□□□ 0.34
CLCN2-215ENST00000636661 GDF3Q9NR23 364 aa17.16■□□□□ 0.34
CLCN2-215ENST00000636661 IPO11Q9UI26 975 aaKnown RBP17.16■□□□□ 0.34
CLCN2-215ENST00000636661 A0A0A6YYK5 440 aaPredicted RBP17.15■□□□□ 0.34
CLCN2-215ENST00000636661 SPDYE2BA6NHP3 402 aa17.15■□□□□ 0.34
CLCN2-215ENST00000636661 SPDYE6P0CI01 402 aa17.15■□□□□ 0.34
CLCN2-215ENST00000636661 DDR1Q08345 913 aa17.15■□□□□ 0.34
CLCN2-215ENST00000636661 TSTA3Q13630 321 aaPredicted RBP17.15■□□□□ 0.34
CLCN2-215ENST00000636661 ARID3BQ8IVW6 561 aaPredicted RBP17.15■□□□□ 0.34
CLCN2-215ENST00000636661 MMP19Q99542 508 aa17.15■□□□□ 0.34
CLCN2-215ENST00000636661 PDCD2LQ9BRP1 358 aa17.15■□□□□ 0.34
CLCN2-215ENST00000636661 FAM129AQ9BZQ8 928 aa17.15■□□□□ 0.34
CLCN2-215ENST00000636661 ARHGAP23Q9P227 1491 aa17.15■□□□□ 0.34
CLCN2-215ENST00000636661 ANKRD26Q9UPS8 1709 aa17.15■□□□□ 0.34
CLCN2-215ENST00000636661 PMLP29590 882 aa17.15■□□□□ 0.34
CLCN2-215ENST00000636661 AMHR2Q16671 573 aa17.15■□□□□ 0.34
CLCN2-215ENST00000636661 ATF7IP2Q5U623 682 aa17.15■□□□□ 0.34
CLCN2-215ENST00000636661 NOP9Q86U38 636 aaKnown RBP17.15■□□□□ 0.34
CLCN2-215ENST00000636661 GGA3Q9NZ52 723 aa17.15■□□□□ 0.34
CLCN2-215ENST00000636661 ENO4A6NNW6 628 aa17.15■□□□□ 0.34
CLCN2-215ENST00000636661 B2RBV5 119 aa17.15■□□□□ 0.34
CLCN2-215ENST00000636661 AP3M2P53677 418 aa17.15■□□□□ 0.34
CLCN2-215ENST00000636661 LCA5Q86VQ0 697 aa17.15■□□□□ 0.34
CLCN2-215ENST00000636661 RMDN2Q96LZ7 410 aa17.15■□□□□ 0.34
CLCN2-215ENST00000636661 NDE1Q9NXR1 346 aa17.15■□□□□ 0.34
CLCN2-215ENST00000636661 SALL4Q9UJQ4 1053 aa17.15■□□□□ 0.34
CLCN2-215ENST00000636661 STAP1Q9ULZ2 295 aa17.15■□□□□ 0.34
CLCN2-215ENST00000636661 TRIM49D1C9J1S8 452 aa17.14■□□□□ 0.34
CLCN2-215ENST00000636661 LMNAP02545 664 aaKnown RBP17.14■□□□□ 0.34
CLCN2-215ENST00000636661 GMPSP49915 693 aaPredicted RBP17.14■□□□□ 0.34
CLCN2-215ENST00000636661 ABI1Q8IZP0 508 aa17.14■□□□□ 0.34
CLCN2-215ENST00000636661 ARMC2Q8NEN0 867 aa17.14■□□□□ 0.34
CLCN2-215ENST00000636661 VPS39Q96JC1 886 aa17.14■□□□□ 0.34
CLCN2-215ENST00000636661 FSD1LQ9BXM9 530 aa17.14■□□□□ 0.34
CLCN2-215ENST00000636661 PHTF1Q9UMS5 762 aa17.14■□□□□ 0.34
CLCN2-215ENST00000636661 FAF1Q9UNN5 650 aaPredicted RBP17.14■□□□□ 0.34
CLCN2-215ENST00000636661 BNIP3LO60238 219 aa17.14■□□□□ 0.33
CLCN2-215ENST00000636661 ITGB3P05106 788 aa17.14■□□□□ 0.33
CLCN2-215ENST00000636661 CACNB2Q08289 660 aaPredicted RBP17.14■□□□□ 0.33
CLCN2-215ENST00000636661 CDKL3Q8IVW4 592 aaPredicted RBP17.14■□□□□ 0.33
CLCN2-215ENST00000636661 OR6P1Q8NGX9 317 aa17.14■□□□□ 0.33
CLCN2-215ENST00000636661 PRPF31Q8WWY3 499 aaKnown RBP17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms