RNA–Protein interactions for RNA: ENST00000636238.1

CIITA-214, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-214ENST00000636238 C12orf50Q8NA57 414 aaPredicted RBP8.07□□□□□ -1.12
CIITA-214ENST00000636238 SNX29Q8TEQ0 813 aa8.07□□□□□ -1.12
CIITA-214ENST00000636238 MCRS1Q96EZ8 462 aa8.07□□□□□ -1.12
CIITA-214ENST00000636238 CPB2Q96IY4 423 aa8.07□□□□□ -1.12
CIITA-214ENST00000636238 CCDC43Q96MW1 224 aaKnown RBP8.07□□□□□ -1.12
CIITA-214ENST00000636238 HSD17B14Q9BPX1 270 aa8.07□□□□□ -1.12
CIITA-214ENST00000636238 LSM14BQ9BX40 385 aaKnown RBP8.07□□□□□ -1.12
CIITA-214ENST00000636238 DNAJC25Q9H1X3 360 aa8.07□□□□□ -1.12
CIITA-214ENST00000636238 BLZF1Q9H2G9 400 aa8.07□□□□□ -1.12
CIITA-214ENST00000636238 SLC38A7Q9NVC3 462 aa8.07□□□□□ -1.12
CIITA-214ENST00000636238 OBP2AQ9NY56 170 aa8.07□□□□□ -1.12
CIITA-214ENST00000636238 WRAP73Q9P2S5 460 aaPredicted RBP8.07□□□□□ -1.12
CIITA-214ENST00000636238 CCDC39Q9UFE4 941 aa8.07□□□□□ -1.12
CIITA-214ENST00000636238 ZMYM5Q9UJ78 669 aa8.07□□□□□ -1.12
CIITA-214ENST00000636238 NDRG2Q9UN36 371 aaKnown RBP8.07□□□□□ -1.12
CIITA-214ENST00000636238 CDY1Q9Y6F8 540 aa8.07□□□□□ -1.12
CIITA-214ENST00000636238 FASNP49327 2511 aaKnown RBP8.06□□□□□ -1.12
CIITA-214ENST00000636238 MYBPHLA2RUH7 354 aa8.06□□□□□ -1.12
CIITA-214ENST00000636238 CASTOR2A6NHX0 329 aa8.06□□□□□ -1.12
CIITA-214ENST00000636238 ACKR2O00590 384 aa8.06□□□□□ -1.12
CIITA-214ENST00000636238 PRRG1O14668 218 aa8.06□□□□□ -1.12
CIITA-214ENST00000636238 ADAM12O43184 909 aa8.06□□□□□ -1.12
CIITA-214ENST00000636238 ATG13O75143 517 aa8.06□□□□□ -1.12
CIITA-214ENST00000636238 B3GAT3O94766 335 aa8.06□□□□□ -1.12
CIITA-214ENST00000636238 SLITRK3O94933 977 aa8.06□□□□□ -1.12
CIITA-214ENST00000636238 FGF19O95750 216 aa8.06□□□□□ -1.12
CIITA-214ENST00000636238 CEBPBP17676 345 aa8.06□□□□□ -1.12
CIITA-214ENST00000636238 GDI1P31150 447 aa8.06□□□□□ -1.12
CIITA-214ENST00000636238 CCT6AP40227 531 aaKnown RBP8.06□□□□□ -1.12
CIITA-214ENST00000636238 RAP1GAPP47736 663 aa8.06□□□□□ -1.12
CIITA-214ENST00000636238 EFNA5P52803 228 aa8.06□□□□□ -1.12
CIITA-214ENST00000636238 NLRP12P59046 1061 aa8.06□□□□□ -1.12
CIITA-214ENST00000636238 PLCB2Q00722 1185 aa8.06□□□□□ -1.12
CIITA-214ENST00000636238 SATB1Q01826 763 aa8.06□□□□□ -1.12
CIITA-214ENST00000636238 FCHO2Q0JRZ9 810 aa8.06□□□□□ -1.12
CIITA-214ENST00000636238 PLD1Q13393 1074 aa8.06□□□□□ -1.12
CIITA-214ENST00000636238 CUL4BQ13620 913 aa8.06□□□□□ -1.12
CIITA-214ENST00000636238 STX1AQ16623 288 aa8.06□□□□□ -1.12
CIITA-214ENST00000636238 MAPK6Q16659 721 aa8.06□□□□□ -1.12
CIITA-214ENST00000636238 SLC5A9Q2M3M2 681 aa8.06□□□□□ -1.12
CIITA-214ENST00000636238 L1TD1Q5T7N2 865 aaKnown RBP8.06□□□□□ -1.12
CIITA-214ENST00000636238 KRT79Q5XKE5 535 aa8.06□□□□□ -1.12
CIITA-214ENST00000636238 HAUS6Q7Z4H7 955 aa8.06□□□□□ -1.12
CIITA-214ENST00000636238 C11orf74Q86VG3 221 aa8.06□□□□□ -1.12
CIITA-214ENST00000636238 FAM160A2Q8N612 972 aaPredicted RBP8.06□□□□□ -1.12
CIITA-214ENST00000636238 CSGALNACT1Q8TDX6 532 aa8.06□□□□□ -1.12
CIITA-214ENST00000636238 ASAP3Q8TDY4 903 aa8.06□□□□□ -1.12
CIITA-214ENST00000636238 GAB3Q8WWW8 586 aa8.06□□□□□ -1.12
CIITA-214ENST00000636238 SMARCE1Q969G3 411 aa8.06□□□□□ -1.12
CIITA-214ENST00000636238 CALML4Q96GE6 196 aa8.06□□□□□ -1.12
CIITA-214ENST00000636238 CDK5RAP3Q96JB5 506 aa8.06□□□□□ -1.12
CIITA-214ENST00000636238 RAB34Q9BZG1 259 aa8.06□□□□□ -1.12
CIITA-214ENST00000636238 PLA2G2FQ9BZM2 168 aa8.06□□□□□ -1.12
CIITA-214ENST00000636238 VPS45Q9NRW7 570 aa8.06□□□□□ -1.12
CIITA-214ENST00000636238 RXFP3Q9NSD7 469 aa8.06□□□□□ -1.12
CIITA-214ENST00000636238 HCFC1R1Q9NWW0 138 aa8.06□□□□□ -1.12
CIITA-214ENST00000636238 USP25Q9UHP3 1055 aa8.06□□□□□ -1.12
CIITA-214ENST00000636238 HOOK1Q9UJC3 728 aaKnown RBP8.06□□□□□ -1.12
CIITA-214ENST00000636238 MAN1B1Q9UKM7 699 aa8.06□□□□□ -1.12
CIITA-214ENST00000636238 PCDHA5Q9Y5H7 936 aa8.06□□□□□ -1.12
CIITA-214ENST00000636238 PATJQ8NI35 1801 aa8.06□□□□□ -1.12
CIITA-214ENST00000636238 CHURC1-FNTBB4DL54 471 aa8.05□□□□□ -1.12
CIITA-214ENST00000636238 B4GALT5O43286 388 aa8.05□□□□□ -1.12
CIITA-214ENST00000636238 MED24O75448 989 aa8.05□□□□□ -1.12
CIITA-214ENST00000636238 RECQL4O94761 1208 aa8.05□□□□□ -1.12
CIITA-214ENST00000636238 KCNK5O95279 499 aa8.05□□□□□ -1.12
CIITA-214ENST00000636238 RPL9P32969 192 aaKnown RBP8.05□□□□□ -1.12
CIITA-214ENST00000636238 FNTBP49356 437 aa8.05□□□□□ -1.12
CIITA-214ENST00000636238 RARRES1P49788 294 aa8.05□□□□□ -1.12
CIITA-214ENST00000636238 ROR1Q01973 937 aa8.05□□□□□ -1.12
CIITA-214ENST00000636238 DPYDQ12882 1025 aa8.05□□□□□ -1.12
CIITA-214ENST00000636238 PRPF4BQ13523 1007 aaKnown RBP8.05□□□□□ -1.12
CIITA-214ENST00000636238 MRPL58Q14197 206 aaKnown RBP8.05□□□□□ -1.12
CIITA-214ENST00000636238 MCM6Q14566 821 aa8.05□□□□□ -1.12
CIITA-214ENST00000636238 PPP2R5AQ15172 486 aa8.05□□□□□ -1.12
CIITA-214ENST00000636238 UPP1Q16831 310 aa8.05□□□□□ -1.12
CIITA-214ENST00000636238 ARHGAP29Q52LW3 1261 aa8.05□□□□□ -1.12
CIITA-214ENST00000636238 PLA2G2CQ5R387 149 aa8.05□□□□□ -1.12
CIITA-214ENST00000636238 STPG1Q5TH74 334 aa8.05□□□□□ -1.12
CIITA-214ENST00000636238 VITQ6UXI7 678 aa8.05□□□□□ -1.12
CIITA-214ENST00000636238 UNQ6494/PRO21346Q6UXR6 183 aa8.05□□□□□ -1.12
CIITA-214ENST00000636238 KCNK18Q7Z418 384 aa8.05□□□□□ -1.12
CIITA-214ENST00000636238 YAF2Q8IY57 180 aa8.05□□□□□ -1.12
CIITA-214ENST00000636238 ELOA2Q8IYF1 753 aaPredicted RBP8.05□□□□□ -1.12
CIITA-214ENST00000636238 CAMKK1Q8N5S9 505 aa8.05□□□□□ -1.12
CIITA-214ENST00000636238 FAM200AQ8TCP9 573 aa8.05□□□□□ -1.12
CIITA-214ENST00000636238 ING5Q8WYH8 240 aa8.05□□□□□ -1.12
CIITA-214ENST00000636238 EXOC4Q96A65 974 aa8.05□□□□□ -1.12
CIITA-214ENST00000636238 DYDC2Q96IM9 177 aa8.05□□□□□ -1.12
CIITA-214ENST00000636238 ZC3H10Q96K80 434 aaKnown RBP8.05□□□□□ -1.12
CIITA-214ENST00000636238 ZNF512Q96ME7 567 aaPredicted RBP8.05□□□□□ -1.12
CIITA-214ENST00000636238 PPP1R10Q96QC0 940 aaKnown RBP8.05□□□□□ -1.12
CIITA-214ENST00000636238 PAAF1Q9BRP4 392 aa8.05□□□□□ -1.12
CIITA-214ENST00000636238 PYM1Q9BRP8 204 aaKnown RBP8.05□□□□□ -1.12
CIITA-214ENST00000636238 PDZD7Q9H5P4 517 aa8.05□□□□□ -1.12
CIITA-214ENST00000636238 CBX8Q9HC52 389 aa8.05□□□□□ -1.12
CIITA-214ENST00000636238 ASAH2Q9NR71 780 aa8.05□□□□□ -1.12
CIITA-214ENST00000636238 TOPORSQ9NS56 1045 aaPredicted RBP8.05□□□□□ -1.12
CIITA-214ENST00000636238 BLOC1S4Q9NUP1 217 aa8.05□□□□□ -1.12
CIITA-214ENST00000636238 ANO10Q9NW15 660 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms