RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 ARRDC4Q8NCT1 418 aa5.8□□□□□ -1.48
SCN1A-209ENST00000635750 TMA16Q96EY4 203 aaKnown RBP5.8□□□□□ -1.48
SCN1A-209ENST00000635750 GLT1D1Q96MS3 346 aa5.8□□□□□ -1.48
SCN1A-209ENST00000635750 AGAP3Q96P47 875 aa5.8□□□□□ -1.48
SCN1A-209ENST00000635750 TGS1Q96RS0 853 aaKnown RBP5.8□□□□□ -1.48
SCN1A-209ENST00000635750 NUDT12Q9BQG2 462 aa5.8□□□□□ -1.48
SCN1A-209ENST00000635750 WWOXQ9NZC7 414 aa5.8□□□□□ -1.48
SCN1A-209ENST00000635750 HERC5Q9UII4 1024 aaKnown RBP5.8□□□□□ -1.48
SCN1A-209ENST00000635750 ZMYND8Q9ULU4 1186 aaPredicted RBP5.8□□□□□ -1.48
SCN1A-209ENST00000635750 PLAAQ9Y263 795 aa5.8□□□□□ -1.48
SCN1A-209ENST00000635750 PRAG1Q86YV5 1406 aa5.8□□□□□ -1.48
SCN1A-209ENST00000635750 FLT1P17948 1338 aa5.8□□□□□ -1.48
SCN1A-209ENST00000635750 SMIM31A0A1B0GVY4 71 aa5.8□□□□□ -1.48
SCN1A-209ENST00000635750 H3BMM5 538 aa5.8□□□□□ -1.48
SCN1A-209ENST00000635750 CNPP09543 421 aaKnown RBP5.8□□□□□ -1.48
SCN1A-209ENST00000635750 MAPK9P45984 424 aa5.8□□□□□ -1.48
SCN1A-209ENST00000635750 CYP24A1Q07973 514 aa5.8□□□□□ -1.48
SCN1A-209ENST00000635750 PKN2Q16513 984 aaKnown RBP5.8□□□□□ -1.48
SCN1A-209ENST00000635750 ZMYM1Q5SVZ6 1142 aa5.8□□□□□ -1.48
SCN1A-209ENST00000635750 HIBCHQ6NVY1 386 aaPredicted RBP5.8□□□□□ -1.48
SCN1A-209ENST00000635750 MTSS1LQ765P7 747 aa5.8□□□□□ -1.48
SCN1A-209ENST00000635750 LINC00523Q86TU6 105 aa5.8□□□□□ -1.48
SCN1A-209ENST00000635750 HERC6Q8IVU3 1022 aa5.8□□□□□ -1.48
SCN1A-209ENST00000635750 CYP4Z2PQ8N1L4 340 aa5.8□□□□□ -1.48
SCN1A-209ENST00000635750 MRPS31Q92665 395 aaKnown RBP5.8□□□□□ -1.48
SCN1A-209ENST00000635750 VPS33AQ96AX1 596 aa5.8□□□□□ -1.48
SCN1A-209ENST00000635750 ECSITQ9BQ95 431 aa5.8□□□□□ -1.48
SCN1A-209ENST00000635750 C11orf70Q9BRQ4 267 aa5.8□□□□□ -1.48
SCN1A-209ENST00000635750 PRKD2Q9BZL6 878 aa5.8□□□□□ -1.48
SCN1A-209ENST00000635750 EXOSC4Q9NPD3 245 aaKnown RBP5.8□□□□□ -1.48
SCN1A-209ENST00000635750 LIMA1Q9UHB6 759 aaKnown RBP5.8□□□□□ -1.48
SCN1A-209ENST00000635750 FAM50BQ9Y247 325 aa5.8□□□□□ -1.48
SCN1A-209ENST00000635750 PFASO15067 1338 aa5.8□□□□□ -1.48
SCN1A-209ENST00000635750 SAC3D1A6NKF1 404 aa5.8□□□□□ -1.48
SCN1A-209ENST00000635750 KRT33AO76009 404 aa5.8□□□□□ -1.48
SCN1A-209ENST00000635750 KRT75O95678 551 aa5.8□□□□□ -1.48
SCN1A-209ENST00000635750 KCNK10P57789 538 aa5.8□□□□□ -1.48
SCN1A-209ENST00000635750 KRR1Q13601 381 aaKnown RBP5.8□□□□□ -1.48
SCN1A-209ENST00000635750 KNOP1Q1ED39 458 aaKnown RBP5.8□□□□□ -1.48
SCN1A-209ENST00000635750 FAM45BPQ6NSW5 357 aa5.8□□□□□ -1.48
SCN1A-209ENST00000635750 EMBQ6PCB8 327 aa5.8□□□□□ -1.48
SCN1A-209ENST00000635750 C17orf53Q8N3J3 647 aaPredicted RBP5.8□□□□□ -1.48
SCN1A-209ENST00000635750 THAP11Q96EK4 314 aa5.8□□□□□ -1.48
SCN1A-209ENST00000635750 WDR35Q9P2L0 1181 aa5.8□□□□□ -1.48
SCN1A-209ENST00000635750 TRMT6Q9UJA5 497 aaKnown RBP5.8□□□□□ -1.48
SCN1A-209ENST00000635750 ZNF335Q9H4Z2 1342 aaPredicted RBP5.8□□□□□ -1.48
SCN1A-209ENST00000635750 RRN3P2A6NIE6 340 aa5.8□□□□□ -1.48
SCN1A-209ENST00000635750 NFIBO00712 420 aa5.8□□□□□ -1.48
SCN1A-209ENST00000635750 MTSS1O43312 755 aa5.8□□□□□ -1.48
SCN1A-209ENST00000635750 SOAT2O75908 522 aa5.8□□□□□ -1.48
SCN1A-209ENST00000635750 PRKCBP05771 671 aa5.8□□□□□ -1.48
SCN1A-209ENST00000635750 GSTM1P09488 218 aa5.8□□□□□ -1.48
SCN1A-209ENST00000635750 CKBP12277 381 aa5.8□□□□□ -1.48
SCN1A-209ENST00000635750 MAPK1P28482 360 aa5.8□□□□□ -1.48
SCN1A-209ENST00000635750 SLC1A1P43005 524 aa5.8□□□□□ -1.48
SCN1A-209ENST00000635750 ARSEP51690 589 aa5.8□□□□□ -1.48
SCN1A-209ENST00000635750 STAT5BP51692 787 aa5.8□□□□□ -1.48
SCN1A-209ENST00000635750 SGCGQ13326 291 aa5.8□□□□□ -1.48
SCN1A-209ENST00000635750 NBPF9Q3BBW0 867 aa5.8□□□□□ -1.48
SCN1A-209ENST00000635750 RCOR2Q8IZ40 523 aa5.8□□□□□ -1.48
SCN1A-209ENST00000635750 NBPF15Q8N660 670 aa5.8□□□□□ -1.48
SCN1A-209ENST00000635750 CDK5RAP1Q96SZ6 601 aaKnown RBP5.8□□□□□ -1.48
SCN1A-209ENST00000635750 SH3GL2Q99962 352 aa5.8□□□□□ -1.48
SCN1A-209ENST00000635750 WWP1Q9H0M0 922 aa5.8□□□□□ -1.48
SCN1A-209ENST00000635750 SPTLC3Q9NUV7 552 aa5.8□□□□□ -1.48
SCN1A-209ENST00000635750 TRPM5Q9NZQ8 1165 aa5.8□□□□□ -1.48
SCN1A-209ENST00000635750 PADI4Q9UM07 663 aa5.8□□□□□ -1.48
SCN1A-209ENST00000635750 EIF3LQ9Y262 564 aaKnown RBP5.8□□□□□ -1.48
SCN1A-209ENST00000635750 KDM5CP41229 1560 aa5.8□□□□□ -1.48
SCN1A-209ENST00000635750 E9PBE3 544 aa5.8□□□□□ -1.48
SCN1A-209ENST00000635750 NDUFS2O75306 463 aa5.8□□□□□ -1.48
SCN1A-209ENST00000635750 ECDO95905 644 aaPredicted RBP5.8□□□□□ -1.48
SCN1A-209ENST00000635750 APRTP07741 180 aa5.8□□□□□ -1.48
SCN1A-209ENST00000635750 CETPP11597 493 aa5.8□□□□□ -1.48
SCN1A-209ENST00000635750 UQCRBP14927 111 aa5.8□□□□□ -1.48
SCN1A-209ENST00000635750 USP10Q14694 798 aaKnown RBP5.8□□□□□ -1.48
SCN1A-209ENST00000635750 RABGAP1LQ5R372 815 aa5.8□□□□□ -1.48
SCN1A-209ENST00000635750 MACC1Q6ZN28 852 aa5.8□□□□□ -1.48
SCN1A-209ENST00000635750 SYDE1Q6ZW31 735 aaPredicted RBP5.8□□□□□ -1.48
SCN1A-209ENST00000635750 DYNLL2Q96FJ2 89 aa5.8□□□□□ -1.48
SCN1A-209ENST00000635750 SH3GL3Q99963 347 aa5.8□□□□□ -1.48
SCN1A-209ENST00000635750 PIGUQ9H490 435 aa5.8□□□□□ -1.48
SCN1A-209ENST00000635750 TDRD3Q9H7E2 651 aaKnown RBP5.8□□□□□ -1.48
SCN1A-209ENST00000635750 RMND5AQ9H871 391 aa5.8□□□□□ -1.48
SCN1A-209ENST00000635750 ELP3Q9H9T3 547 aa5.8□□□□□ -1.48
SCN1A-209ENST00000635750 NMRK2Q9NPI5 230 aa5.8□□□□□ -1.48
SCN1A-209ENST00000635750 RGS18Q9NS28 235 aa5.8□□□□□ -1.48
SCN1A-209ENST00000635750 FBXO10Q9UK96 956 aa5.8□□□□□ -1.48
SCN1A-209ENST00000635750 ASAP1Q9ULH1 1129 aa5.8□□□□□ -1.48
SCN1A-209ENST00000635750 PCDHA10Q9Y5I2 948 aa5.8□□□□□ -1.48
SCN1A-209ENST00000635750 ACSL4O60488 711 aa5.79□□□□□ -1.48
SCN1A-209ENST00000635750 YWHABP31946 246 aaKnown RBP5.79□□□□□ -1.48
SCN1A-209ENST00000635750 EPHB3P54753 998 aa5.79□□□□□ -1.48
SCN1A-209ENST00000635750 PWP1Q13610 501 aa5.79□□□□□ -1.48
SCN1A-209ENST00000635750 PIGHQ14442 188 aaPredicted RBP5.79□□□□□ -1.48
SCN1A-209ENST00000635750 NOTUMQ6P988 496 aa5.79□□□□□ -1.48
SCN1A-209ENST00000635750 ITIH5Q86UX2 942 aa5.79□□□□□ -1.48
SCN1A-209ENST00000635750 AHI1Q8N157 1196 aa5.79□□□□□ -1.48
SCN1A-209ENST00000635750 FAM45AQ8TCE6 357 aa5.79□□□□□ -1.48
SCN1A-209ENST00000635750 SPACA7Q96KW9 195 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms