RNA–Protein interactions for RNA: ENST00000635293.1

TP53-228, Transcript of tumor protein p53, humanhuman

TSL 5

Gene TP53, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-228ENST00000635293 GDF6Q6KF10 455 aaPredicted RBP12.41□□□□□ -0.42
TP53-228ENST00000635293 ALKAL1Q6UXT8 129 aa12.41□□□□□ -0.42
TP53-228ENST00000635293 LRRC52Q8N7C0 313 aa12.41□□□□□ -0.42
TP53-228ENST00000635293 HNRNPLLQ8WVV9 542 aaKnown RBP12.41□□□□□ -0.42
TP53-228ENST00000635293 ZNF606Q8WXB4 792 aa12.41□□□□□ -0.42
TP53-228ENST00000635293 HPDLQ96IR7 371 aa12.41□□□□□ -0.42
TP53-228ENST00000635293 PSMB7Q99436 277 aa12.41□□□□□ -0.42
TP53-228ENST00000635293 NXF3Q9H4D5 531 aaKnown RBP12.41□□□□□ -0.42
TP53-228ENST00000635293 ANKZF1Q9H8Y5 726 aa12.41□□□□□ -0.42
TP53-228ENST00000635293 SNTG2Q9NY99 539 aa12.41□□□□□ -0.42
TP53-228ENST00000635293 NXF1Q9UBU9 619 aaKnown RBP12.41□□□□□ -0.42
TP53-228ENST00000635293 DDX20Q9UHI6 824 aaKnown RBP12.41□□□□□ -0.42
TP53-228ENST00000635293 RAB21Q9UL25 225 aa12.41□□□□□ -0.42
TP53-228ENST00000635293 UBQLN1Q9UMX0 589 aaKnown RBP12.41□□□□□ -0.42
TP53-228ENST00000635293 POLIQ9UNA4 740 aa12.41□□□□□ -0.42
TP53-228ENST00000635293 PACSIN2Q9UNF0 486 aaPredicted RBP12.41□□□□□ -0.42
TP53-228ENST00000635293 AGAP1Q9UPQ3 857 aa12.41□□□□□ -0.42
TP53-228ENST00000635293 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.41□□□□□ -0.42
TP53-228ENST00000635293 CDY2AQ9Y6F7 541 aa12.41□□□□□ -0.42
TP53-228ENST00000635293 SCN1AP35498 2009 aa12.4□□□□□ -0.42
TP53-228ENST00000635293 TRPA1O75762 1119 aa12.4□□□□□ -0.42
TP53-228ENST00000635293 TNNC1P63316 161 aa12.4□□□□□ -0.42
TP53-228ENST00000635293 INCA1Q0VD86 236 aa12.4□□□□□ -0.42
TP53-228ENST00000635293 ZBTB6Q15916 424 aa12.4□□□□□ -0.42
TP53-228ENST00000635293 XKR4Q5GH76 650 aa12.4□□□□□ -0.42
TP53-228ENST00000635293 FAM228AQ86W67 206 aa12.4□□□□□ -0.42
TP53-228ENST00000635293 TMEM35BQ8NCS4 154 aa12.4□□□□□ -0.42
TP53-228ENST00000635293 SPATA4Q8NEY3 305 aa12.4□□□□□ -0.42
TP53-228ENST00000635293 RAET1EQ8TD07 263 aa12.4□□□□□ -0.42
TP53-228ENST00000635293 ACTRT1Q8TDG2 376 aa12.4□□□□□ -0.42
TP53-228ENST00000635293 SENP6Q9GZR1 1112 aaPredicted RBP12.4□□□□□ -0.42
TP53-228ENST00000635293 GOLPH3Q9H4A6 298 aa12.4□□□□□ -0.42
TP53-228ENST00000635293 LCMT1Q9UIC8 334 aa12.4□□□□□ -0.42
TP53-228ENST00000635293 CEP83Q9Y592 693 aa12.4□□□□□ -0.42
TP53-228ENST00000635293 SCINQ9Y6U3 715 aa12.4□□□□□ -0.42
TP53-228ENST00000635293 PGRMC1O00264 195 aaKnown RBP12.4□□□□□ -0.42
TP53-228ENST00000635293 ATMINO43313 823 aaPredicted RBP12.4□□□□□ -0.42
TP53-228ENST00000635293 CILPO75339 1184 aa12.4□□□□□ -0.42
TP53-228ENST00000635293 SEC31AO94979 1220 aaKnown RBP12.4□□□□□ -0.42
TP53-228ENST00000635293 CALCAP01258 141 aa12.4□□□□□ -0.42
TP53-228ENST00000635293 CD4P01730 458 aa12.4□□□□□ -0.42
TP53-228ENST00000635293 CALB1P05937 261 aa12.4□□□□□ -0.42
TP53-228ENST00000635293 WEE2P0C1S8 567 aa12.4□□□□□ -0.42
TP53-228ENST00000635293 KCNE1P15382 129 aa12.4□□□□□ -0.42
TP53-228ENST00000635293 ATF7P17544 494 aaPredicted RBP12.4□□□□□ -0.42
TP53-228ENST00000635293 KCNA10Q16322 511 aa12.4□□□□□ -0.42
TP53-228ENST00000635293 FAM47CQ5HY64 1035 aa12.4□□□□□ -0.42
TP53-228ENST00000635293 RNF180Q86T96 592 aa12.4□□□□□ -0.42
TP53-228ENST00000635293 HACE1Q8IYU2 909 aa12.4□□□□□ -0.42
TP53-228ENST00000635293 RASGEF1CQ8N431 466 aa12.4□□□□□ -0.42
TP53-228ENST00000635293 UBL4BQ8N7F7 174 aa12.4□□□□□ -0.42
TP53-228ENST00000635293 CYFIP2Q96F07 1278 aa12.4□□□□□ -0.42
TP53-228ENST00000635293 WNT8AQ9H1J5 351 aa12.4□□□□□ -0.42
TP53-228ENST00000635293 CARD9Q9H257 536 aa12.4□□□□□ -0.42
TP53-228ENST00000635293 SMYD3Q9H7B4 428 aa12.4□□□□□ -0.42
TP53-228ENST00000635293 CHST12Q9NRB3 414 aa12.4□□□□□ -0.42
TP53-228ENST00000635293 TTC7AQ9ULT0 858 aaPredicted RBP12.4□□□□□ -0.42
TP53-228ENST00000635293 TLR3O15455 904 aaKnown RBP12.39□□□□□ -0.43
TP53-228ENST00000635293 DDX3YO15523 660 aaKnown RBP12.39□□□□□ -0.43
TP53-228ENST00000635293 CAND2O75155 1236 aa12.39□□□□□ -0.43
TP53-228ENST00000635293 CYP3A5P20815 502 aa12.39□□□□□ -0.43
TP53-228ENST00000635293 BRD2P25440 801 aaKnown RBP12.39□□□□□ -0.43
TP53-228ENST00000635293 DNA2P51530 1060 aa12.39□□□□□ -0.43
TP53-228ENST00000635293 C2orf54Q08AI8 447 aa12.39□□□□□ -0.43
TP53-228ENST00000635293 MGAT3Q09327 533 aa12.39□□□□□ -0.43
TP53-228ENST00000635293 TERF2Q15554 542 aa12.39□□□□□ -0.43
TP53-228ENST00000635293 WDR93Q6P2C0 686 aa12.39□□□□□ -0.43
TP53-228ENST00000635293 USP38Q8NB14 1042 aa12.39□□□□□ -0.43
TP53-228ENST00000635293 SLAIN1Q8ND83 568 aa12.39□□□□□ -0.43
TP53-228ENST00000635293 CPA5Q8WXQ8 436 aa12.39□□□□□ -0.43
TP53-228ENST00000635293 ZNF560Q96MR9 790 aa12.39□□□□□ -0.43
TP53-228ENST00000635293 MRPL47Q9HD33 250 aaKnown RBP12.39□□□□□ -0.43
TP53-228ENST00000635293 SAGE1Q9NXZ1 904 aa12.39□□□□□ -0.43
TP53-228ENST00000635293 ADAM22Q9P0K1 906 aa12.39□□□□□ -0.43
TP53-228ENST00000635293 NOC2LQ9Y3T9 749 aaKnown RBP12.39□□□□□ -0.43
TP53-228ENST00000635293 IPPQ9Y573 584 aa12.39□□□□□ -0.43
TP53-228ENST00000635293 ALG6Q9Y672 507 aa12.39□□□□□ -0.43
TP53-228ENST00000635293 MOXD2PA6NHM9 499 aa12.38□□□□□ -0.43
TP53-228ENST00000635293 ERLIN1O75477 346 aa12.38□□□□□ -0.43
TP53-228ENST00000635293 RPS6KA5O75582 802 aa12.38□□□□□ -0.43
TP53-228ENST00000635293 RHOXF2BP0C7M4 288 aa12.38□□□□□ -0.43
TP53-228ENST00000635293 MMP8P22894 467 aa12.38□□□□□ -0.43
TP53-228ENST00000635293 CTNNA2P26232 953 aa12.38□□□□□ -0.43
TP53-228ENST00000635293 PNPLA4P41247 253 aa12.38□□□□□ -0.43
TP53-228ENST00000635293 RAP1GAPP47736 663 aa12.38□□□□□ -0.43
TP53-228ENST00000635293 GUCY2FP51841 1108 aa12.38□□□□□ -0.43
TP53-228ENST00000635293 RAD23BP54727 409 aa12.38□□□□□ -0.43
TP53-228ENST00000635293 GLE1Q53GS7 698 aaKnown RBP12.38□□□□□ -0.43
TP53-228ENST00000635293 TWF2Q6IBS0 349 aaKnown RBP12.38□□□□□ -0.43
TP53-228ENST00000635293 PASD1Q8IV76 773 aa12.38□□□□□ -0.43
TP53-228ENST00000635293 ZMAT2Q96NC0 199 aaKnown RBP12.38□□□□□ -0.43
TP53-228ENST00000635293 RHOXF2Q9BQY4 288 aa12.38□□□□□ -0.43
TP53-228ENST00000635293 ZSWIM1Q9BR11 485 aa12.38□□□□□ -0.43
TP53-228ENST00000635293 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.38□□□□□ -0.431e-6■■□□□ 12.8
TP53-228ENST00000635293 C11orf70Q9BRQ4 267 aa12.38□□□□□ -0.43
TP53-228ENST00000635293 TSEN34Q9BSV6 310 aaKnown RBP12.38□□□□□ -0.43
TP53-228ENST00000635293 FUT8Q9BYC5 575 aa12.38□□□□□ -0.43
TP53-228ENST00000635293 UBXN6Q9BZV1 441 aa12.38□□□□□ -0.43
TP53-228ENST00000635293 SDCBP2Q9H190 292 aa12.38□□□□□ -0.43
TP53-228ENST00000635293 LHX5Q9H2C1 402 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms