RNA–Protein interactions for RNA: ENST00000635193.1

COL11A1-211, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL11A1, Length 5,289 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-211ENST00000635193 MICU2Q8IYU8 434 aa12.22□□□□□ -0.45
COL11A1-211ENST00000635193 C18orf8Q96DM3 657 aa12.22□□□□□ -0.45
COL11A1-211ENST00000635193 MCEEQ96PE7 176 aa12.22□□□□□ -0.45
COL11A1-211ENST00000635193 TOPORSQ9NS56 1045 aaPredicted RBP12.22□□□□□ -0.45
COL11A1-211ENST00000635193 HERC5Q9UII4 1024 aaKnown RBP12.22□□□□□ -0.45
COL11A1-211ENST00000635193 NAGPAQ9UK23 515 aa12.22□□□□□ -0.45
COL11A1-211ENST00000635193 HUS1O60921 280 aa12.22□□□□□ -0.45
COL11A1-211ENST00000635193 FSBPO95073 299 aa12.22□□□□□ -0.45
COL11A1-211ENST00000635193 SERPINB8P50452 374 aa12.22□□□□□ -0.45
COL11A1-211ENST00000635193 ARPP19P56211 112 aa12.22□□□□□ -0.45
COL11A1-211ENST00000635193 DMPKQ09013 629 aa12.22□□□□□ -0.45
COL11A1-211ENST00000635193 PIGHQ14442 188 aaPredicted RBP12.22□□□□□ -0.45
COL11A1-211ENST00000635193 SLC13A5Q86YT5 568 aaPredicted RBP12.22□□□□□ -0.45
COL11A1-211ENST00000635193 ABI1Q8IZP0 508 aa12.22□□□□□ -0.45
COL11A1-211ENST00000635193 E2F7Q96AV8 911 aa12.22□□□□□ -0.45
COL11A1-211ENST00000635193 MPP4Q96JB8 637 aa12.22□□□□□ -0.45
COL11A1-211ENST00000635193 MAGEB18Q96M61 343 aa12.22□□□□□ -0.45
COL11A1-211ENST00000635193 RUBCNLQ9H714 662 aa12.22□□□□□ -0.45
COL11A1-211ENST00000635193 NPHP4O75161 1426 aaPredicted RBP12.22□□□□□ -0.45
COL11A1-211ENST00000635193 TULP4Q9NRJ4 1543 aa12.22□□□□□ -0.45
COL11A1-211ENST00000635193 TBX3O15119 743 aa12.22□□□□□ -0.45
COL11A1-211ENST00000635193 SASH3O75995 380 aa12.22□□□□□ -0.45
COL11A1-211ENST00000635193 FXR2P51116 673 aaKnown RBP eCLIP12.22□□□□□ -0.45
COL11A1-211ENST00000635193 GEMIN4P57678 1058 aaKnown RBP12.22□□□□□ -0.45
COL11A1-211ENST00000635193 EAPPQ56P03 285 aaPredicted RBP12.22□□□□□ -0.45
COL11A1-211ENST00000635193 TTC39BQ5VTQ0 682 aaPredicted RBP12.22□□□□□ -0.45
COL11A1-211ENST00000635193 GJB7Q6PEY0 223 aa12.22□□□□□ -0.45
COL11A1-211ENST00000635193 TRIM65Q6PJ69 517 aa12.22□□□□□ -0.45
COL11A1-211ENST00000635193 ZNF483Q8TF39 744 aaPredicted RBP12.22□□□□□ -0.45
COL11A1-211ENST00000635193 SNX19Q92543 992 aa12.22□□□□□ -0.45
COL11A1-211ENST00000635193 LRCH1Q9Y2L9 728 aa12.22□□□□□ -0.45
COL11A1-211ENST00000635193 LOC100653049A0A140TA62 436 aa12.21□□□□□ -0.45
COL11A1-211ENST00000635193 KRT34O76011 436 aa12.21□□□□□ -0.45
COL11A1-211ENST00000635193 PSMC3P17980 439 aa12.21□□□□□ -0.45
COL11A1-211ENST00000635193 CIITAP33076 1130 aa12.21□□□□□ -0.45
COL11A1-211ENST00000635193 SNRNP35Q16560 246 aaKnown RBP12.21□□□□□ -0.45
COL11A1-211ENST00000635193 CEP78Q5JTW2 689 aa12.21□□□□□ -0.45
COL11A1-211ENST00000635193 SETD3Q86TU7 594 aaPredicted RBP12.21□□□□□ -0.45
COL11A1-211ENST00000635193 ULK4Q96C45 1275 aa12.21□□□□□ -0.45
COL11A1-211ENST00000635193 TIPINQ9BVW5 301 aa12.21□□□□□ -0.45
COL11A1-211ENST00000635193 AP5M1Q9H0R1 490 aa12.21□□□□□ -0.45
COL11A1-211ENST00000635193 HEY2Q9UBP5 337 aa12.21□□□□□ -0.45
COL11A1-211ENST00000635193 COL15A1P39059 1388 aa12.21□□□□□ -0.45
COL11A1-211ENST00000635193 ZNF543Q08ER8 600 aa12.21□□□□□ -0.45
COL11A1-211ENST00000635193 NME3Q13232 169 aa12.21□□□□□ -0.45
COL11A1-211ENST00000635193 ZC2HC1CQ53FD0 456 aaPredicted RBP12.21□□□□□ -0.45
COL11A1-211ENST00000635193 FIGNQ5HY92 759 aa12.21□□□□□ -0.45
COL11A1-211ENST00000635193 FLCNQ8NFG4 579 aa12.21□□□□□ -0.45
COL11A1-211ENST00000635193 BEST2Q8NFU1 509 aa12.21□□□□□ -0.45
COL11A1-211ENST00000635193 ZSWIM1Q9BR11 485 aa12.21□□□□□ -0.45
COL11A1-211ENST00000635193 MKNK1Q9BUB5 465 aa12.21□□□□□ -0.45
COL11A1-211ENST00000635193 FAM49AQ9H0Q0 323 aaPredicted RBP12.21□□□□□ -0.45
COL11A1-211ENST00000635193 THAP2Q9H0W7 228 aa12.21□□□□□ -0.45
COL11A1-211ENST00000635193 PARVBQ9HBI1 364 aa12.21□□□□□ -0.45
COL11A1-211ENST00000635193 PRR23D1E9PI22 279 aaPredicted RBP12.21□□□□□ -0.46
COL11A1-211ENST00000635193 SMAPO00193 183 aa12.21□□□□□ -0.46
COL11A1-211ENST00000635193 PRR23D2P0DMB1 279 aaPredicted RBP12.21□□□□□ -0.46
COL11A1-211ENST00000635193 ABCE1P61221 599 aaKnown RBP12.21□□□□□ -0.46
COL11A1-211ENST00000635193 CDKAL1Q5VV42 579 aa12.21□□□□□ -0.46
COL11A1-211ENST00000635193 RINLQ6ZS11 566 aa12.21□□□□□ -0.46
COL11A1-211ENST00000635193 ARHGAP27Q6ZUM4 889 aa12.21□□□□□ -0.46
COL11A1-211ENST00000635193 SCUBE1Q8IWY4 988 aa12.21□□□□□ -0.46
COL11A1-211ENST00000635193 TDRD3Q9H7E2 651 aaKnown RBP12.21□□□□□ -0.46
COL11A1-211ENST00000635193 ZNF839A8K0R7 811 aa12.21□□□□□ -0.46
COL11A1-211ENST00000635193 EIF3DO15371 548 aaKnown RBP eCLIP12.21□□□□□ -0.46
COL11A1-211ENST00000635193 PYGLP06737 847 aa12.21□□□□□ -0.46
COL11A1-211ENST00000635193 ADORA2BP29275 332 aa12.21□□□□□ -0.46
COL11A1-211ENST00000635193 EIF2B2P49770 351 aaKnown RBP12.21□□□□□ -0.46
COL11A1-211ENST00000635193 RAB14P61106 215 aa12.21□□□□□ -0.46
COL11A1-211ENST00000635193 TRADDQ15628 312 aa12.21□□□□□ -0.46
COL11A1-211ENST00000635193 SUPT20HL1Q3ZLR7 823 aa12.21□□□□□ -0.46
COL11A1-211ENST00000635193 PREPLQ4J6C6 727 aaPredicted RBP12.21□□□□□ -0.46
COL11A1-211ENST00000635193 NUP93Q8N1F7 819 aa12.21□□□□□ -0.46
COL11A1-211ENST00000635193 TERB1Q8NA31 727 aa12.21□□□□□ -0.46
COL11A1-211ENST00000635193 MTMR4Q9NYA4 1195 aa12.21□□□□□ -0.46
COL11A1-211ENST00000635193 KCND2Q9NZV8 630 aa12.21□□□□□ -0.46
COL11A1-211ENST00000635193 MYO3BQ8WXR4 1341 aa12.21□□□□□ -0.46
COL11A1-211ENST00000635193 KIAA0391O15091 583 aaKnown RBP12.2□□□□□ -0.46
COL11A1-211ENST00000635193 RFX5P48382 616 aaPredicted RBP12.2□□□□□ -0.46
COL11A1-211ENST00000635193 KRR1Q13601 381 aaKnown RBP12.2□□□□□ -0.46
COL11A1-211ENST00000635193 OASLQ15646 514 aaKnown RBP12.2□□□□□ -0.46
COL11A1-211ENST00000635193 CHI3L2Q15782 390 aa12.2□□□□□ -0.46
COL11A1-211ENST00000635193 PLEKHA7Q6IQ23 1121 aa12.2□□□□□ -0.46
COL11A1-211ENST00000635193 RBBP8NLQ8NC74 664 aaPredicted RBP12.2□□□□□ -0.46
COL11A1-211ENST00000635193 OR6P1Q8NGX9 317 aa12.2□□□□□ -0.46
COL11A1-211ENST00000635193 ACTRT1Q8TDG2 376 aa12.2□□□□□ -0.46
COL11A1-211ENST00000635193 ZFYVE19Q96K21 471 aa12.2□□□□□ -0.46
COL11A1-211ENST00000635193 KLHL4Q9C0H6 718 aa12.2□□□□□ -0.46
COL11A1-211ENST00000635193 WDR35Q9P2L0 1181 aa12.2□□□□□ -0.46
COL11A1-211ENST00000635193 FAM153AQ9UHL3 310 aa12.2□□□□□ -0.46
COL11A1-211ENST00000635193 PCDHA10Q9Y5I2 948 aa12.2□□□□□ -0.46
COL11A1-211ENST00000635193 USP31Q70CQ4 1352 aa12.2□□□□□ -0.46
COL11A1-211ENST00000635193 ZNF189O75820 626 aaPredicted RBP12.2□□□□□ -0.46
COL11A1-211ENST00000635193 OVGP1Q12889 678 aa12.2□□□□□ -0.46
COL11A1-211ENST00000635193 SNRNP48Q6IEG0 339 aaKnown RBP12.2□□□□□ -0.46
COL11A1-211ENST00000635193 TAGAPQ8N103 731 aa12.2□□□□□ -0.46
COL11A1-211ENST00000635193 RXFP1Q9HBX9 757 aa12.2□□□□□ -0.46
COL11A1-211ENST00000635193 RNF146Q9NTX7 359 aa12.2□□□□□ -0.46
COL11A1-211ENST00000635193 HNRNPRO43390 633 aaKnown RBP12.2□□□□□ -0.46
COL11A1-211ENST00000635193 RPS6KA4O75676 772 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms