RNA–Protein interactions for RNA: ENST00000629427.2

SHPRH-211, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SHPRH, Length 7,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-211ENST00000629427 SLC25A27O95847 323 aa12.29□□□□□ -0.44
SHPRH-211ENST00000629427 FAM200BP0CF97 657 aa12.29□□□□□ -0.44
SHPRH-211ENST00000629427 CHRM3P20309 590 aa12.29□□□□□ -0.44
SHPRH-211ENST00000629427 PLEKHA8Q96JA3 519 aa12.29□□□□□ -0.44
SHPRH-211ENST00000629427 TMEM39BQ9GZU3 492 aa12.29□□□□□ -0.44
SHPRH-211ENST00000629427 CARSP49589 748 aaKnown RBP12.29□□□□□ -0.44
SHPRH-211ENST00000629427 ZNF200P98182 395 aaPredicted RBP12.29□□□□□ -0.44
SHPRH-211ENST00000629427 KCNB1Q14721 858 aa12.29□□□□□ -0.44
SHPRH-211ENST00000629427 LRRC8BQ6P9F7 803 aa12.29□□□□□ -0.44
SHPRH-211ENST00000629427 ARHGAP18Q8N392 663 aa12.29□□□□□ -0.44
SHPRH-211ENST00000629427 KLK14Q9P0G3 267 aa12.29□□□□□ -0.44
SHPRH-211ENST00000629427 DAGLAQ9Y4D2 1042 aa12.29□□□□□ -0.44
SHPRH-211ENST00000629427 PGM1P36871 562 aa12.29□□□□□ -0.44
SHPRH-211ENST00000629427 RFC5P40937 340 aa12.29□□□□□ -0.44
SHPRH-211ENST00000629427 GRAMD1AQ96CP6 724 aa12.29□□□□□ -0.44
SHPRH-211ENST00000629427 MOV10L1Q9BXT6 1211 aaKnown RBP12.29□□□□□ -0.44
SHPRH-211ENST00000629427 WWP1Q9H0M0 922 aa12.29□□□□□ -0.44
SHPRH-211ENST00000629427 PCMTD2Q9NV79 361 aa12.29□□□□□ -0.44
SHPRH-211ENST00000629427 PRDM15P57071 1507 aaPredicted RBP12.29□□□□□ -0.44
SHPRH-211ENST00000629427 CHMP1BQ7LBR1 199 aa12.29□□□□□ -0.44
SHPRH-211ENST00000629427 HORMAD1Q86X24 394 aa12.29□□□□□ -0.44
SHPRH-211ENST00000629427 CINPQ9BW66 212 aaPredicted RBP12.29□□□□□ -0.44
SHPRH-211ENST00000629427 FAM47DPA6NHR8 397 aa12.28□□□□□ -0.44
SHPRH-211ENST00000629427 EIF4E1BA6NMX2 242 aaKnown RBP12.28□□□□□ -0.44
SHPRH-211ENST00000629427 ADCY3O60266 1144 aa12.28□□□□□ -0.44
SHPRH-211ENST00000629427 HBP1O60381 514 aa12.28□□□□□ -0.44
SHPRH-211ENST00000629427 ATXN3P54252 364 aaPredicted RBP12.28□□□□□ -0.44
SHPRH-211ENST00000629427 CYTH1Q15438 398 aa12.28□□□□□ -0.44
SHPRH-211ENST00000629427 UGP2Q16851 508 aa12.28□□□□□ -0.44
SHPRH-211ENST00000629427 ZC2HC1CQ53FD0 456 aaPredicted RBP12.28□□□□□ -0.44
SHPRH-211ENST00000629427 C11orf74Q86VG3 221 aa12.28□□□□□ -0.44
SHPRH-211ENST00000629427 CHSY1Q86X52 802 aa12.28□□□□□ -0.44
SHPRH-211ENST00000629427 PI4K2AQ9BTU6 479 aa12.28□□□□□ -0.44
SHPRH-211ENST00000629427 OLFML3Q9NRN5 406 aa12.28□□□□□ -0.44
SHPRH-211ENST00000629427 METTL5Q9NRN9 209 aaKnown RBP12.28□□□□□ -0.44
SHPRH-211ENST00000629427 TTLL13PA6NNM8 815 aa12.28□□□□□ -0.44
SHPRH-211ENST00000629427 CFAP99D6REC4 459 aa12.28□□□□□ -0.44
SHPRH-211ENST00000629427 AKAP10O43572 662 aa12.28□□□□□ -0.44
SHPRH-211ENST00000629427 DMTNQ08495 405 aa12.28□□□□□ -0.44
SHPRH-211ENST00000629427 C3orf62Q6ZUJ4 267 aa12.28□□□□□ -0.44
SHPRH-211ENST00000629427 CYGBQ8WWM9 190 aa12.28□□□□□ -0.44
SHPRH-211ENST00000629427 WDCPQ9H6R7 721 aa12.28□□□□□ -0.44
SHPRH-211ENST00000629427 PNPLA7Q6ZV29 1317 aa12.28□□□□□ -0.44
SHPRH-211ENST00000629427 C17orf102A2RUQ5 167 aa12.28□□□□□ -0.44
SHPRH-211ENST00000629427 RRN3P2A6NIE6 340 aa12.28□□□□□ -0.44
SHPRH-211ENST00000629427 ODC1P11926 461 aa12.28□□□□□ -0.44
SHPRH-211ENST00000629427 MLNP12872 115 aa12.28□□□□□ -0.44
SHPRH-211ENST00000629427 SEMA3FQ13275 785 aa12.28□□□□□ -0.44
SHPRH-211ENST00000629427 CYP4A22Q5TCH4 519 aa12.28□□□□□ -0.44
SHPRH-211ENST00000629427 CENPPQ6IPU0 288 aa12.28□□□□□ -0.44
SHPRH-211ENST00000629427 PKD2L2Q9NZM6 624 aa12.28□□□□□ -0.44
SHPRH-211ENST00000629427 CDYLQ9Y232 598 aa12.28□□□□□ -0.44
SHPRH-211ENST00000629427 NEU2Q9Y3R4 380 aa12.28□□□□□ -0.44
SHPRH-211ENST00000629427 GMPSP49915 693 aaPredicted RBP12.28□□□□□ -0.44
SHPRH-211ENST00000629427 RAD23BP54727 409 aa12.28□□□□□ -0.44
SHPRH-211ENST00000629427 NLRP14Q86W24 1093 aa12.28□□□□□ -0.44
SHPRH-211ENST00000629427 GLT1D1Q96MS3 346 aa12.28□□□□□ -0.44
SHPRH-211ENST00000629427 LIMA1Q9UHB6 759 aaKnown RBP12.28□□□□□ -0.44
SHPRH-211ENST00000629427 ATP6V1G3Q96LB4 118 aa12.28□□□□□ -0.44
SHPRH-211ENST00000629427 MARCOQ9UEW3 520 aaPredicted RBP12.28□□□□□ -0.44
SHPRH-211ENST00000629427 ZNF229Q9UJW7 825 aa12.28□□□□□ -0.44
SHPRH-211ENST00000629427 KDM1AO60341 852 aa12.27□□□□□ -0.44
SHPRH-211ENST00000629427 PHF2O75151 1096 aa12.27□□□□□ -0.44
SHPRH-211ENST00000629427 PDHBP11177 359 aa12.27□□□□□ -0.44
SHPRH-211ENST00000629427 NEK2P51955 445 aa12.27□□□□□ -0.44
SHPRH-211ENST00000629427 MRPL28Q13084 256 aaKnown RBP12.27□□□□□ -0.44
SHPRH-211ENST00000629427 LAMC2Q13753 1193 aa12.27□□□□□ -0.44
SHPRH-211ENST00000629427 TMEM132BQ14DG7 1078 aa12.27□□□□□ -0.44
SHPRH-211ENST00000629427 DIS3LQ8TF46 1054 aaKnown RBP12.27□□□□□ -0.44
SHPRH-211ENST00000629427 DBR1Q9UK59 544 aaKnown RBP12.27□□□□□ -0.44
SHPRH-211ENST00000629427 ADAM21Q9UKJ8 722 aa12.27□□□□□ -0.44
SHPRH-211ENST00000629427 A0A1W2PQC6 194 aa12.27□□□□□ -0.44
SHPRH-211ENST00000629427 CYTH3O43739 400 aa12.27□□□□□ -0.44
SHPRH-211ENST00000629427 ITGB3P05106 788 aa12.27□□□□□ -0.44
SHPRH-211ENST00000629427 POLBP06746 335 aa12.27□□□□□ -0.44
SHPRH-211ENST00000629427 GTF2H1P32780 548 aa12.27□□□□□ -0.44
SHPRH-211ENST00000629427 PLA2G4AP47712 749 aa12.27□□□□□ -0.44
SHPRH-211ENST00000629427 BTKQ06187 659 aa12.27□□□□□ -0.44
SHPRH-211ENST00000629427 STX3Q13277 289 aa12.27□□□□□ -0.44
SHPRH-211ENST00000629427 PDK1Q15118 436 aa12.27□□□□□ -0.44
SHPRH-211ENST00000629427 GGT7Q9UJ14 662 aa12.27□□□□□ -0.44
SHPRH-211ENST00000629427 SLC9A1P19634 815 aa12.27□□□□□ -0.45
SHPRH-211ENST00000629427 POLD3Q15054 466 aaPredicted RBP12.27□□□□□ -0.45
SHPRH-211ENST00000629427 IFNEQ86WN2 208 aa12.27□□□□□ -0.45
SHPRH-211ENST00000629427 VCPKMTQ9H867 229 aa12.27□□□□□ -0.45
SHPRH-211ENST00000629427 IL1RL2Q9HB29 575 aa12.27□□□□□ -0.45
SHPRH-211ENST00000629427 CLTCL1P53675 1640 aa12.27□□□□□ -0.45
SHPRH-211ENST00000629427 RFX7Q2KHR2 1363 aa12.27□□□□□ -0.45
SHPRH-211ENST00000629427 NR3C2P08235 984 aa12.27□□□□□ -0.45
SHPRH-211ENST00000629427 TP53BP2Q13625 1128 aa12.27□□□□□ -0.45
SHPRH-211ENST00000629427 LONRF1Q17RB8 773 aa12.27□□□□□ -0.45
SHPRH-211ENST00000629427 GPAT2Q6NUI2 795 aa12.27□□□□□ -0.45
SHPRH-211ENST00000629427 CATSPER1Q8NEC5 780 aa12.27□□□□□ -0.45
SHPRH-211ENST00000629427 SPATA4Q8NEY3 305 aa12.27□□□□□ -0.45
SHPRH-211ENST00000629427 TMEM169Q96HH4 297 aa12.27□□□□□ -0.45
SHPRH-211ENST00000629427 TSEN34Q9BSV6 310 aaKnown RBP12.27□□□□□ -0.45
SHPRH-211ENST00000629427 EXTL3O43909 919 aa12.27□□□□□ -0.45
SHPRH-211ENST00000629427 CLASP2O75122 1294 aaKnown RBP12.27□□□□□ -0.45
SHPRH-211ENST00000629427 ASS1P00966 412 aaKnown RBP12.27□□□□□ -0.45
SHPRH-211ENST00000629427 TCF3P15923 654 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms