RNA–Protein interactions for RNA: ENST00000629036.2

DDX41-219, Transcript of DEAD-box helicase 41, humanhuman

TSL 4 BASIC

Gene DDX41, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-219ENST00000629036 HS2ST1Q7LGA3 356 aa12□□□□□ -0.49
DDX41-219ENST00000629036 RNF135Q8IUD6 432 aa12□□□□□ -0.49
DDX41-219ENST00000629036 OR10T2Q8NGX3 314 aa12□□□□□ -0.49
DDX41-219ENST00000629036 SENP8Q96LD8 212 aa12□□□□□ -0.49
DDX41-219ENST00000629036 CGRRF1Q99675 332 aa12□□□□□ -0.49
DDX41-219ENST00000629036 KIAA1586Q9HCI6 787 aa12□□□□□ -0.49
DDX41-219ENST00000629036 TIMM13Q9Y5L4 95 aaPredicted RBP12□□□□□ -0.49
DDX41-219ENST00000629036 DCHS1Q96JQ0 3298 aa12□□□□□ -0.49
DDX41-219ENST00000629036 MYO15AQ9UKN7 3530 aa12□□□□□ -0.49
DDX41-219ENST00000629036 VPS13AQ96RL7 3174 aa12□□□□□ -0.49
DDX41-219ENST00000629036 WDR87Q6ZQQ6 2873 aa11.99□□□□□ -0.49
DDX41-219ENST00000629036 TMEM221A6NGB7 291 aa11.99□□□□□ -0.49
DDX41-219ENST00000629036 M0R296 226 aa11.99□□□□□ -0.49
DDX41-219ENST00000629036 NRG2O14511 850 aaPredicted RBP11.99□□□□□ -0.49
DDX41-219ENST00000629036 N4BP1O75113 896 aaKnown RBP11.99□□□□□ -0.49
DDX41-219ENST00000629036 ZMYND10O75800 440 aa11.99□□□□□ -0.49
DDX41-219ENST00000629036 NR3C1P04150 777 aa11.99□□□□□ -0.49
DDX41-219ENST00000629036 ITGB3P05106 788 aa11.99□□□□□ -0.49
DDX41-219ENST00000629036 POU2F2P09086 479 aa11.99□□□□□ -0.49
DDX41-219ENST00000629036 CD44P16070 742 aaKnown RBP11.99□□□□□ -0.49
DDX41-219ENST00000629036 POLR2BP30876 1174 aaKnown RBP11.99□□□□□ -0.49
DDX41-219ENST00000629036 TFAMQ00059 246 aaKnown RBP11.99□□□□□ -0.49
DDX41-219ENST00000629036 MYBPC2Q14324 1141 aa11.99□□□□□ -0.49
DDX41-219ENST00000629036 TMC5Q6UXY8 1006 aa11.99□□□□□ -0.49
DDX41-219ENST00000629036 WDR49Q8IV35 697 aa11.99□□□□□ -0.49
DDX41-219ENST00000629036 SUGP1Q8IWZ8 645 aaKnown RBP11.99□□□□□ -0.49
DDX41-219ENST00000629036 LRRC52Q8N7C0 313 aa11.99□□□□□ -0.49
DDX41-219ENST00000629036 KREMEN2Q8NCW0 462 aa11.99□□□□□ -0.49
DDX41-219ENST00000629036 GOLGA5Q8TBA6 731 aa11.99□□□□□ -0.49
DDX41-219ENST00000629036 EDAQ92838 391 aa11.99□□□□□ -0.49
DDX41-219ENST00000629036 GSDMAQ96QA5 445 aa11.99□□□□□ -0.49
DDX41-219ENST00000629036 TMEM209Q96SK2 561 aa11.99□□□□□ -0.49
DDX41-219ENST00000629036 POP1Q99575 1024 aaKnown RBP11.99□□□□□ -0.49
DDX41-219ENST00000629036 PHF7Q9BWX1 381 aaPredicted RBP11.99□□□□□ -0.49
DDX41-219ENST00000629036 CRISPLD1Q9H336 500 aa11.99□□□□□ -0.49
DDX41-219ENST00000629036 PLEKHA4Q9H4M7 779 aa11.99□□□□□ -0.49
DDX41-219ENST00000629036 MAN1B1Q9UKM7 699 aa11.99□□□□□ -0.49
DDX41-219ENST00000629036 ITGA11Q9UKX5 1188 aa11.99□□□□□ -0.49
DDX41-219ENST00000629036 MAPK8IP1Q9UQF2 711 aa11.99□□□□□ -0.49
DDX41-219ENST00000629036 NUB1Q9Y5A7 615 aa11.99□□□□□ -0.49
DDX41-219ENST00000629036 NME7Q9Y5B8 376 aa11.99□□□□□ -0.49
DDX41-219ENST00000629036 CACNA1HO95180 2353 aa11.99□□□□□ -0.49
DDX41-219ENST00000629036 HELZP42694 1942 aaKnown RBP11.98□□□□□ -0.49
DDX41-219ENST00000629036 GOLGA6L4A6NEF3 574 aa11.98□□□□□ -0.49
DDX41-219ENST00000629036 LRRIQ3A6PVS8 624 aaPredicted RBP11.98□□□□□ -0.49
DDX41-219ENST00000629036 SEC24AO95486 1093 aa11.98□□□□□ -0.49
DDX41-219ENST00000629036 PAX3P23760 479 aa11.98□□□□□ -0.49
DDX41-219ENST00000629036 HOXA9P31269 272 aa11.98□□□□□ -0.49
DDX41-219ENST00000629036 PRCPP42785 496 aa11.98□□□□□ -0.49
DDX41-219ENST00000629036 TAF6P49848 677 aa11.98□□□□□ -0.49
DDX41-219ENST00000629036 PMS1P54277 932 aaKnown RBP11.98□□□□□ -0.49
DDX41-219ENST00000629036 UBE2HP62256 183 aa11.98□□□□□ -0.49
DDX41-219ENST00000629036 DLG4P78352 724 aa11.98□□□□□ -0.49
DDX41-219ENST00000629036 ZNF658Q5TYW1 1059 aaPredicted RBP11.98□□□□□ -0.49
DDX41-219ENST00000629036 CENPPQ6IPU0 288 aa11.98□□□□□ -0.49
DDX41-219ENST00000629036 ZNF280DQ6N043 979 aa11.98□□□□□ -0.49
DDX41-219ENST00000629036 POTEHQ6S545 545 aa11.98□□□□□ -0.49
DDX41-219ENST00000629036 RDH13Q8NBN7 331 aa11.98□□□□□ -0.49
DDX41-219ENST00000629036 PARD3BQ8TEW8 1205 aa11.98□□□□□ -0.49
DDX41-219ENST00000629036 ATOH1Q92858 354 aaPredicted RBP11.98□□□□□ -0.49
DDX41-219ENST00000629036 PKMYT1Q99640 499 aa11.98□□□□□ -0.49
DDX41-219ENST00000629036 XYLT2Q9H1B5 865 aa11.98□□□□□ -0.49
DDX41-219ENST00000629036 ZDHHC7Q9NXF8 308 aa11.98□□□□□ -0.49
DDX41-219ENST00000629036 GDAP2Q9NXN4 497 aa11.98□□□□□ -0.49
DDX41-219ENST00000629036 L1RE1Q9UN81 338 aa11.98□□□□□ -0.49
DDX41-219ENST00000629036 MYH10P35580 1976 aa11.98□□□□□ -0.49
DDX41-219ENST00000629036 RIF1Q5UIP0 2472 aaKnown RBP11.97□□□□□ -0.49
DDX41-219ENST00000629036 FAM186AA6NE01 2351 aa11.97□□□□□ -0.49
DDX41-219ENST00000629036 ARHGEF37A1IGU5 675 aa11.97□□□□□ -0.49
DDX41-219ENST00000629036 KPNA7A9QM74 516 aa11.97□□□□□ -0.49
DDX41-219ENST00000629036 MAPK13O15264 365 aa11.97□□□□□ -0.49
DDX41-219ENST00000629036 AKAP3O75969 853 aa11.97□□□□□ -0.49
DDX41-219ENST00000629036 VNN1O95497 513 aa11.97□□□□□ -0.49
DDX41-219ENST00000629036 C8AP07357 584 aa11.97□□□□□ -0.49
DDX41-219ENST00000629036 OR4Q2P0C623 313 aa11.97□□□□□ -0.49
DDX41-219ENST00000629036 ATF2P15336 505 aa11.97□□□□□ -0.49
DDX41-219ENST00000629036 YWHAHQ04917 246 aaPredicted RBP11.97□□□□□ -0.49
DDX41-219ENST00000629036 MORC3Q14149 939 aa11.97□□□□□ -0.49
DDX41-219ENST00000629036 CTXN3Q4LDR2 81 aa11.97□□□□□ -0.49
DDX41-219ENST00000629036 TDRD10Q5VZ19 366 aaKnown RBP11.97□□□□□ -0.49
DDX41-219ENST00000629036 WSCD1Q658N2 575 aa11.97□□□□□ -0.49
DDX41-219ENST00000629036 TRIM67Q6ZTA4 783 aa11.97□□□□□ -0.49
DDX41-219ENST00000629036 TRAPPC11Q7Z392 1133 aa11.97□□□□□ -0.49
DDX41-219ENST00000629036 OSTM1Q86WC4 334 aa11.97□□□□□ -0.49
DDX41-219ENST00000629036 TCEAL8Q8IYN2 117 aa11.97□□□□□ -0.49
DDX41-219ENST00000629036 ADSSL1Q8N142 457 aa11.97□□□□□ -0.49
DDX41-219ENST00000629036 TTC9BQ8N6N2 239 aa11.97□□□□□ -0.49
DDX41-219ENST00000629036 APPL2Q8NEU8 664 aa11.97□□□□□ -0.49
DDX41-219ENST00000629036 ZNF461Q8TAF7 563 aa11.97□□□□□ -0.49
DDX41-219ENST00000629036 KBTBD7Q8WVZ9 684 aa11.97□□□□□ -0.49
DDX41-219ENST00000629036 NECTIN4Q96NY8 510 aa11.97□□□□□ -0.49
DDX41-219ENST00000629036 IPO9Q96P70 1041 aaKnown RBP11.97□□□□□ -0.49
DDX41-219ENST00000629036 PRRX2Q99811 253 aa11.97□□□□□ -0.49
DDX41-219ENST00000629036 PRKD2Q9BZL6 878 aa11.97□□□□□ -0.49
DDX41-219ENST00000629036 LMBRD1Q9NUN5 540 aa11.97□□□□□ -0.49
DDX41-219ENST00000629036 AGAP1Q9UPQ3 857 aa11.97□□□□□ -0.49
DDX41-219ENST00000629036 CLUHO75153 1309 aa11.96□□□□□ -0.49
DDX41-219ENST00000629036 CCDC195A0A1B0GUA6 201 aa11.96□□□□□ -0.49
DDX41-219ENST00000629036 C2CD4DB7Z1M9 353 aa11.96□□□□□ -0.49
DDX41-219ENST00000629036 PPP1R3GB7ZBB8 358 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms