RNA–Protein interactions for RNA: ENST00000628810.1

SOX2-OT-249, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 618 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-249ENST00000628810 NOP14P78316 857 aaKnown RBP10.58□□□□□ -0.72
SOX2-OT-249ENST00000628810 ELAVL2Q12926 359 aaKnown RBP10.58□□□□□ -0.72
SOX2-OT-249ENST00000628810 NR1I3Q14994 352 aa10.58□□□□□ -0.72
SOX2-OT-249ENST00000628810 EXOC3L4Q17RC7 722 aa10.58□□□□□ -0.72
SOX2-OT-249ENST00000628810 SGSM1Q2NKQ1 1148 aa10.58□□□□□ -0.72
SOX2-OT-249ENST00000628810 ZNF699Q32M78 642 aa10.58□□□□□ -0.72
SOX2-OT-249ENST00000628810 SPOUT1Q5T280 376 aaKnown RBP10.58□□□□□ -0.72
SOX2-OT-249ENST00000628810 PPP2R2DQ66LE6 453 aa10.58□□□□□ -0.72
SOX2-OT-249ENST00000628810 SMYD5Q6GMV2 418 aa10.58□□□□□ -0.72
SOX2-OT-249ENST00000628810 TRIM65Q6PJ69 517 aa10.58□□□□□ -0.72
SOX2-OT-249ENST00000628810 GBP6Q6ZN66 633 aa10.58□□□□□ -0.72
SOX2-OT-249ENST00000628810 CREBRFQ8IUR6 639 aa10.58□□□□□ -0.72
SOX2-OT-249ENST00000628810 SPATA18Q8TC71 538 aa10.58□□□□□ -0.72
SOX2-OT-249ENST00000628810 TIFAQ96CG3 184 aa10.58□□□□□ -0.72
SOX2-OT-249ENST00000628810 HPDLQ96IR7 371 aa10.58□□□□□ -0.72
SOX2-OT-249ENST00000628810 NAP1L5Q96NT1 182 aaPredicted RBP10.58□□□□□ -0.72
SOX2-OT-249ENST00000628810 C17orf80Q9BSJ5 609 aa10.58□□□□□ -0.72
SOX2-OT-249ENST00000628810 VN1R3Q9BXE9 311 aa10.58□□□□□ -0.72
SOX2-OT-249ENST00000628810 IMPG2Q9BZV3 1241 aa10.58□□□□□ -0.72
SOX2-OT-249ENST00000628810 INTS2Q9H0H0 1204 aaKnown RBP10.58□□□□□ -0.72
SOX2-OT-249ENST00000628810 NKX2-4Q9H2Z4 354 aa10.58□□□□□ -0.72
SOX2-OT-249ENST00000628810 FAM124BQ9H5Z6 455 aaPredicted RBP10.58□□□□□ -0.72
SOX2-OT-249ENST00000628810 SPG21Q9NZD8 308 aa10.58□□□□□ -0.72
SOX2-OT-249ENST00000628810 LZTS1Q9Y250 596 aa10.58□□□□□ -0.72
SOX2-OT-249ENST00000628810 SIK3Q9Y2K2 1263 aa10.58□□□□□ -0.72
SOX2-OT-249ENST00000628810 PLXNA4Q9HCM2 1894 aa10.57□□□□□ -0.72
SOX2-OT-249ENST00000628810 A0A1W2PQC6 194 aa10.57□□□□□ -0.72
SOX2-OT-249ENST00000628810 FSD2A1L4K1 749 aa10.57□□□□□ -0.72
SOX2-OT-249ENST00000628810 NT5C1B-RDH14C9J2C7 533 aa10.57□□□□□ -0.72
SOX2-OT-249ENST00000628810 SYN3O14994 580 aa10.57□□□□□ -0.72
SOX2-OT-249ENST00000628810 TRAPPC3O43617 180 aa10.57□□□□□ -0.72
SOX2-OT-249ENST00000628810 LRRN2O75325 713 aa10.57□□□□□ -0.72
SOX2-OT-249ENST00000628810 FGF18O76093 207 aa10.57□□□□□ -0.72
SOX2-OT-249ENST00000628810 SERPINC1P01008 464 aa10.57□□□□□ -0.72
SOX2-OT-249ENST00000628810 CYP11A1P05108 521 aa10.57□□□□□ -0.72
SOX2-OT-249ENST00000628810 COL9A1P20849 921 aa10.57□□□□□ -0.72
SOX2-OT-249ENST00000628810 PON1P27169 355 aa10.57□□□□□ -0.72
SOX2-OT-249ENST00000628810 PBX1P40424 430 aa10.57□□□□□ -0.72
SOX2-OT-249ENST00000628810 ASPAP45381 313 aa10.57□□□□□ -0.72
SOX2-OT-249ENST00000628810 UBASH3AP57075 661 aa10.57□□□□□ -0.72
SOX2-OT-249ENST00000628810 UBE3AQ05086 875 aa10.57□□□□□ -0.72
SOX2-OT-249ENST00000628810 KCNMA1Q12791 1236 aa10.57□□□□□ -0.72
SOX2-OT-249ENST00000628810 FILIP1LQ4L180 1135 aa10.57□□□□□ -0.72
SOX2-OT-249ENST00000628810 TIGD5Q53EQ6 642 aa10.57□□□□□ -0.72
SOX2-OT-249ENST00000628810 FKBP15Q5T1M5 1219 aa10.57□□□□□ -0.72
SOX2-OT-249ENST00000628810 DPY19L2P1Q6NXN4 242 aa10.57□□□□□ -0.72
SOX2-OT-249ENST00000628810 FUT10Q6P4F1 479 aa10.57□□□□□ -0.72
SOX2-OT-249ENST00000628810 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.57□□□□□ -0.72
SOX2-OT-249ENST00000628810 DPH6Q7L8W6 267 aa10.57□□□□□ -0.72
SOX2-OT-249ENST00000628810 SPRED2Q7Z698 418 aa10.57□□□□□ -0.72
SOX2-OT-249ENST00000628810 DDX53Q86TM3 631 aaKnown RBP10.57□□□□□ -0.72
SOX2-OT-249ENST00000628810 GPR65Q8IYL9 337 aa10.57□□□□□ -0.72
SOX2-OT-249ENST00000628810 CCDC150Q8NCX0 1101 aa10.57□□□□□ -0.72
SOX2-OT-249ENST00000628810 EHBP1Q8NDI1 1231 aa10.57□□□□□ -0.72
SOX2-OT-249ENST00000628810 RABGGTAQ92696 567 aa10.57□□□□□ -0.72
SOX2-OT-249ENST00000628810 WNT2BQ93097 391 aa10.57□□□□□ -0.72
SOX2-OT-249ENST00000628810 TMEM169Q96HH4 297 aa10.57□□□□□ -0.72
SOX2-OT-249ENST00000628810 C11orf84Q9BUA3 381 aaPredicted RBP10.57□□□□□ -0.72
SOX2-OT-249ENST00000628810 HERC2P3Q9BVR0 1158 aa10.57□□□□□ -0.72
SOX2-OT-249ENST00000628810 BCO2Q9BYV7 579 aa10.57□□□□□ -0.72
SOX2-OT-249ENST00000628810 NIF3L1Q9GZT8 377 aa10.57□□□□□ -0.72
SOX2-OT-249ENST00000628810 APOBEC3GQ9HC16 384 aaKnown RBP10.57□□□□□ -0.72
SOX2-OT-249ENST00000628810 SIX2Q9NPC8 291 aa10.57□□□□□ -0.72
SOX2-OT-249ENST00000628810 PLCB1Q9NQ66 1216 aa10.57□□□□□ -0.72
SOX2-OT-249ENST00000628810 CHST7Q9NS84 486 aa10.57□□□□□ -0.72
SOX2-OT-249ENST00000628810 R3HCC1Q9Y3T6 440 aaKnown RBP10.57□□□□□ -0.72
SOX2-OT-249ENST00000628810 DAAM1Q9Y4D1 1078 aa10.57□□□□□ -0.72
SOX2-OT-249ENST00000628810 NUB1Q9Y5A7 615 aa10.57□□□□□ -0.72
SOX2-OT-249ENST00000628810 CHD7Q9P2D1 2997 aa10.57□□□□□ -0.72
SOX2-OT-249ENST00000628810 SCN1AP35498 2009 aa10.57□□□□□ -0.72
SOX2-OT-249ENST00000628810 TRANK1O15050 2925 aa10.56□□□□□ -0.72
SOX2-OT-249ENST00000628810 ARHGEF37A1IGU5 675 aa10.56□□□□□ -0.72
SOX2-OT-249ENST00000628810 H3BNC9 293 aa10.56□□□□□ -0.72
SOX2-OT-249ENST00000628810 AP5Z1O43299 807 aa10.56□□□□□ -0.72
SOX2-OT-249ENST00000628810 CBFA2T2O43439 604 aa10.56□□□□□ -0.72
SOX2-OT-249ENST00000628810 TACC1O75410 805 aa10.56□□□□□ -0.72
SOX2-OT-249ENST00000628810 TADA2AO75478 443 aa10.56□□□□□ -0.72
SOX2-OT-249ENST00000628810 SOD2P04179 222 aa10.56□□□□□ -0.72
SOX2-OT-249ENST00000628810 FAM163BP0C2L3 166 aa10.56□□□□□ -0.72
SOX2-OT-249ENST00000628810 ODC1P11926 461 aa10.56□□□□□ -0.72
SOX2-OT-249ENST00000628810 P4HA1P13674 534 aa10.56□□□□□ -0.72
SOX2-OT-249ENST00000628810 TYMPP19971 482 aa10.56□□□□□ -0.72
SOX2-OT-249ENST00000628810 FGFR3P22607 806 aa10.56□□□□□ -0.72
SOX2-OT-249ENST00000628810 RFX1P22670 979 aa10.56□□□□□ -0.72
SOX2-OT-249ENST00000628810 BRCC3P46736 316 aa10.56□□□□□ -0.72
SOX2-OT-249ENST00000628810 PTPN5P54829 565 aa10.56□□□□□ -0.72
SOX2-OT-249ENST00000628810 GCNT1Q02742 428 aa10.56□□□□□ -0.72
SOX2-OT-249ENST00000628810 UBXN1Q04323 297 aa10.56□□□□□ -0.72
SOX2-OT-249ENST00000628810 WDR72Q3MJ13 1102 aa10.56□□□□□ -0.72
SOX2-OT-249ENST00000628810 ZNF667Q5HYK9 610 aa10.56□□□□□ -0.72
SOX2-OT-249ENST00000628810 THSD4Q6ZMP0 1018 aa10.56□□□□□ -0.72
SOX2-OT-249ENST00000628810 LAPTM4BQ86VI4 370 aa10.56□□□□□ -0.72
SOX2-OT-249ENST00000628810 TOP6BLQ8N6T0 577 aa10.56□□□□□ -0.72
SOX2-OT-249ENST00000628810 KLHL23Q8NBE8 558 aa10.56□□□□□ -0.72
SOX2-OT-249ENST00000628810 HASPINQ8TF76 798 aa10.56□□□□□ -0.72
SOX2-OT-249ENST00000628810 JAKMIP2Q96AA8 810 aa10.56□□□□□ -0.72
SOX2-OT-249ENST00000628810 SENP8Q96LD8 212 aa10.56□□□□□ -0.72
SOX2-OT-249ENST00000628810 PI4K2AQ9BTU6 479 aa10.56□□□□□ -0.72
SOX2-OT-249ENST00000628810 GPR62Q9BZJ7 368 aa10.56□□□□□ -0.72
SOX2-OT-249ENST00000628810 SLC28A3Q9HAS3 691 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms