RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 ITGA11Q9UKX5 1188 aa23.47■■□□□ 1.35
PNKP-220ENST00000627232 POLIQ9UNA4 740 aa23.47■■□□□ 1.35
PNKP-220ENST00000627232 NR2E1Q9Y466 385 aa23.47■■□□□ 1.35
PNKP-220ENST00000627232 HAS3O00219 553 aa23.46■■□□□ 1.35
PNKP-220ENST00000627232 POLR3GO15318 223 aaPredicted RBP23.46■■□□□ 1.35
PNKP-220ENST00000627232 MED7O43513 233 aa23.46■■□□□ 1.35
PNKP-220ENST00000627232 GPR32O75388 356 aa23.46■■□□□ 1.35
PNKP-220ENST00000627232 IGHA2P01877 340 aa23.46■■□□□ 1.35
PNKP-220ENST00000627232 ITGB3P05106 788 aa23.46■■□□□ 1.35
PNKP-220ENST00000627232 P4HA1P13674 534 aa23.46■■□□□ 1.35
PNKP-220ENST00000627232 CHRNA3P32297 505 aa23.46■■□□□ 1.35
PNKP-220ENST00000627232 MAN1A1P33908 653 aa23.46■■□□□ 1.35
PNKP-220ENST00000627232 CYP1B1Q16678 543 aa23.46■■□□□ 1.35
PNKP-220ENST00000627232 SCARA5Q6ZMJ2 495 aa23.46■■□□□ 1.35
PNKP-220ENST00000627232 SAPCD2Q86UD0 394 aa23.46■■□□□ 1.35
PNKP-220ENST00000627232 CPNE8Q86YQ8 564 aa23.46■■□□□ 1.35
PNKP-220ENST00000627232 SLC13A5Q86YT5 568 aaPredicted RBP23.46■■□□□ 1.35
PNKP-220ENST00000627232 ZFYVE28Q9HCC9 887 aa23.46■■□□□ 1.35
PNKP-220ENST00000627232 ERVK-5Q9HDB9 667 aa23.46■■□□□ 1.35
PNKP-220ENST00000627232 NXF1Q9UBU9 619 aaKnown RBP23.46■■□□□ 1.35
PNKP-220ENST00000627232 MTUS1Q9ULD2 1270 aa23.46■■□□□ 1.35
PNKP-220ENST00000627232 UTP11Q9Y3A2 253 aaKnown RBP23.46■■□□□ 1.35
PNKP-220ENST00000627232 SBDSQ9Y3A5 250 aaKnown RBP eCLIP23.46■■□□□ 1.35
PNKP-220ENST00000627232 CEP83Q9Y592 693 aa23.46■■□□□ 1.35
PNKP-220ENST00000627232 TTI1O43156 1089 aa23.45■■□□□ 1.34
PNKP-220ENST00000627232 PSEN2P49810 448 aa23.45■■□□□ 1.34
PNKP-220ENST00000627232 WDR72Q3MJ13 1102 aa23.45■■□□□ 1.34
PNKP-220ENST00000627232 AADACL2Q6P093 401 aa23.45■■□□□ 1.34
PNKP-220ENST00000627232 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.45■■□□□ 1.34
PNKP-220ENST00000627232 FEZF2Q8TBJ5 459 aa23.45■■□□□ 1.34
PNKP-220ENST00000627232 LHX5Q9H2C1 402 aa23.45■■□□□ 1.34
PNKP-220ENST00000627232 PLEKHA4Q9H4M7 779 aa23.45■■□□□ 1.34
PNKP-220ENST00000627232 PLEKHA5Q9HAU0 1116 aa23.45■■□□□ 1.34
PNKP-220ENST00000627232 GJD2Q9UKL4 321 aa23.45■■□□□ 1.34
PNKP-220ENST00000627232 DERAQ9Y315 318 aa23.45■■□□□ 1.34
PNKP-220ENST00000627232 GOLGA6BA6NDN3 693 aa23.44■■□□□ 1.34
PNKP-220ENST00000627232 CYP2C9P11712 490 aa23.44■■□□□ 1.34
PNKP-220ENST00000627232 CYP2C19P33261 490 aa23.44■■□□□ 1.34
PNKP-220ENST00000627232 ADAM17P78536 824 aa23.44■■□□□ 1.34
PNKP-220ENST00000627232 LACTBP83111 547 aaPredicted RBP23.44■■□□□ 1.34
PNKP-220ENST00000627232 DR1Q01658 176 aa23.44■■□□□ 1.34
PNKP-220ENST00000627232 KIZQ2M2Z5 673 aa23.44■■□□□ 1.34
PNKP-220ENST00000627232 TTC39CQ8N584 583 aa23.44■■□□□ 1.34
PNKP-220ENST00000627232 MAIP1Q8WWC4 291 aa23.44■■□□□ 1.34
PNKP-220ENST00000627232 TFAP2BQ92481 460 aa23.44■■□□□ 1.34
PNKP-220ENST00000627232 AP5M1Q9H0R1 490 aa23.44■■□□□ 1.34
PNKP-220ENST00000627232 PCYOX1Q9UHG3 505 aa23.44■■□□□ 1.34
PNKP-220ENST00000627232 PSTPIP1O43586 416 aa23.43■■□□□ 1.34
PNKP-220ENST00000627232 SYF2O95926 243 aaKnown RBP23.43■■□□□ 1.34
PNKP-220ENST00000627232 ECHS1P30084 290 aa23.43■■□□□ 1.34
PNKP-220ENST00000627232 SSTR3P32745 418 aaPredicted RBP23.43■■□□□ 1.34
PNKP-220ENST00000627232 RBP5P82980 135 aa23.43■■□□□ 1.34
PNKP-220ENST00000627232 TAP1Q03518 808 aa23.43■■□□□ 1.34
PNKP-220ENST00000627232 CCL14Q16627 93 aa23.43■■□□□ 1.34
PNKP-220ENST00000627232 ZNF394Q53GI3 561 aa23.43■■□□□ 1.34
PNKP-220ENST00000627232 PRELID2Q8N945 189 aa23.43■■□□□ 1.34
PNKP-220ENST00000627232 C12orf50Q8NA57 414 aaPredicted RBP23.43■■□□□ 1.34
PNKP-220ENST00000627232 C1orf131Q8NDD1 294 aaKnown RBP23.43■■□□□ 1.34
PNKP-220ENST00000627232 KATNAL1Q9BW62 490 aa23.43■■□□□ 1.34
PNKP-220ENST00000627232 TRIM7Q9C029 511 aa23.43■■□□□ 1.34
PNKP-220ENST00000627232 FAM49AQ9H0Q0 323 aaPredicted RBP23.43■■□□□ 1.34
PNKP-220ENST00000627232 DPP3Q9NY33 737 aa23.43■■□□□ 1.34
PNKP-220ENST00000627232 IP6K2Q9UHH9 426 aa23.43■■□□□ 1.34
PNKP-220ENST00000627232 RASAL2Q9UJF2 1139 aa23.43■■□□□ 1.34
PNKP-220ENST00000627232 TCRBV5S1A1TA0A578 114 aa23.43■■□□□ 1.34
PNKP-220ENST00000627232 AGPSO00116 658 aa23.43■■□□□ 1.34
PNKP-220ENST00000627232 FSCN2O14926 492 aa23.43■■□□□ 1.34
PNKP-220ENST00000627232 FAM153BP0C7A2 387 aa23.43■■□□□ 1.34
PNKP-220ENST00000627232 CYP2B6P20813 491 aa23.43■■□□□ 1.34
PNKP-220ENST00000627232 HOXA11P31270 313 aaPredicted RBP23.43■■□□□ 1.34
PNKP-220ENST00000627232 RAD23BP54727 409 aa23.43■■□□□ 1.34
PNKP-220ENST00000627232 HLTFQ14527 1009 aaKnown RBP eCLIP23.43■■□□□ 1.34
PNKP-220ENST00000627232 TRADDQ15628 312 aa23.43■■□□□ 1.34
PNKP-220ENST00000627232 FAM153CQ494X1 144 aa23.43■■□□□ 1.34
PNKP-220ENST00000627232 C2CD6Q53TS8 623 aa23.43■■□□□ 1.34
PNKP-220ENST00000627232 LLGL2Q6P1M3 1020 aa23.43■■□□□ 1.34
PNKP-220ENST00000627232 SLC27A1Q6PCB7 646 aa23.43■■□□□ 1.34
PNKP-220ENST00000627232 CATSPER4Q7RTX7 472 aa23.43■■□□□ 1.34
PNKP-220ENST00000627232 ADAT2Q7Z6V5 191 aaKnown RBP23.43■■□□□ 1.34
PNKP-220ENST00000627232 PHLDB2Q86SQ0 1253 aa23.43■■□□□ 1.34
PNKP-220ENST00000627232 TSEN2Q8NCE0 465 aaKnown RBP23.43■■□□□ 1.34
PNKP-220ENST00000627232 HPDLQ96IR7 371 aa23.43■■□□□ 1.34
PNKP-220ENST00000627232 SDCBP2Q9H190 292 aa23.43■■□□□ 1.34
PNKP-220ENST00000627232 FAM153AQ9UHL3 310 aa23.43■■□□□ 1.34
PNKP-220ENST00000627232 TLR3O15455 904 aaKnown RBP23.42■■□□□ 1.34
PNKP-220ENST00000627232 HSF2BPO75031 334 aa23.42■■□□□ 1.34
PNKP-220ENST00000627232 NPTXRO95502 500 aa23.42■■□□□ 1.34
PNKP-220ENST00000627232 DARSP14868 501 aaKnown RBP23.42■■□□□ 1.34
PNKP-220ENST00000627232 AXLP30530 894 aa23.42■■□□□ 1.34
PNKP-220ENST00000627232 POLR2BP30876 1174 aaKnown RBP23.42■■□□□ 1.34
PNKP-220ENST00000627232 GGCXP38435 758 aa23.42■■□□□ 1.34
PNKP-220ENST00000627232 HSPA9P38646 679 aaKnown RBP23.42■■□□□ 1.34
PNKP-220ENST00000627232 DRG2P55039 364 aaKnown RBP23.42■■□□□ 1.34
PNKP-220ENST00000627232 SREBF2Q12772 1141 aa23.42■■□□□ 1.34
PNKP-220ENST00000627232 NOTUMQ6P988 496 aa23.42■■□□□ 1.34
PNKP-220ENST00000627232 RHOT1Q8IXI2 618 aa23.42■■□□□ 1.34
PNKP-220ENST00000627232 WDTC1Q8N5D0 677 aa23.42■■□□□ 1.34
PNKP-220ENST00000627232 MAGOHBQ96A72 148 aaKnown RBP23.42■■□□□ 1.34
PNKP-220ENST00000627232 DDX27Q96GQ7 796 aaKnown RBP23.42■■□□□ 1.34
PNKP-220ENST00000627232 CELF4Q9BZC1 486 aaKnown RBP23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms