RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 GPR158Q5T848 1215 aa16.01■□□□□ 0.15
PNKP-218ENST00000625299 USP37Q86T82 979 aa16.01■□□□□ 0.15
PNKP-218ENST00000625299 SNX29Q8TEQ0 813 aa16.01■□□□□ 0.15
PNKP-218ENST00000625299 LRRC3BQ96PB8 259 aa16.01■□□□□ 0.15
PNKP-218ENST00000625299 ARHGAP28Q9P2N2 729 aa16.01■□□□□ 0.15
PNKP-218ENST00000625299 LRWD1Q9UFC0 647 aa16.01■□□□□ 0.15
PNKP-218ENST00000625299 ATG2BQ96BY7 2078 aa16■□□□□ 0.15
PNKP-218ENST00000625299 E9PMD0 336 aa16■□□□□ 0.15
PNKP-218ENST00000625299 ABLIM1O14639 778 aa16■□□□□ 0.15
PNKP-218ENST00000625299 SLC16A4O15374 487 aa16■□□□□ 0.15
PNKP-218ENST00000625299 RPP40O75818 363 aaKnown RBP16■□□□□ 0.15
PNKP-218ENST00000625299 SOAT2O75908 522 aa16■□□□□ 0.15
PNKP-218ENST00000625299 CXCL8P10145 99 aa16■□□□□ 0.15
PNKP-218ENST00000625299 LIMK1P53667 647 aa16■□□□□ 0.15
PNKP-218ENST00000625299 STRN3Q13033 797 aa16■□□□□ 0.15
PNKP-218ENST00000625299 CCINQ13939 588 aa16■□□□□ 0.15
PNKP-218ENST00000625299 NOLC1Q14978 699 aaKnown RBP eCLIP16■□□□□ 0.15
PNKP-218ENST00000625299 SLC10A6Q3KNW5 377 aa16■□□□□ 0.15
PNKP-218ENST00000625299 ARHGAP15Q53QZ3 475 aa16■□□□□ 0.15
PNKP-218ENST00000625299 TTC38Q5R3I4 469 aa16■□□□□ 0.15
PNKP-218ENST00000625299 DSTYKQ6XUX3 929 aa16■□□□□ 0.15
PNKP-218ENST00000625299 KBTBD6Q86V97 674 aa16■□□□□ 0.15
PNKP-218ENST00000625299 DAW1Q8N136 415 aa16■□□□□ 0.15
PNKP-218ENST00000625299 BEST2Q8NFU1 509 aa16■□□□□ 0.15
PNKP-218ENST00000625299 DRC1Q96MC2 740 aa16■□□□□ 0.15
PNKP-218ENST00000625299 SMOC1Q9H4F8 434 aa16■□□□□ 0.15
PNKP-218ENST00000625299 M0QZQ0 153 aa15.99■□□□□ 0.15
PNKP-218ENST00000625299 OAZ2O95190 189 aa15.99■□□□□ 0.15
PNKP-218ENST00000625299 EPN2O95208 641 aa15.99■□□□□ 0.15
PNKP-218ENST00000625299 PRAMEF12O95522 483 aa15.99■□□□□ 0.15
PNKP-218ENST00000625299 GABRR2P28476 465 aa15.99■□□□□ 0.15
PNKP-218ENST00000625299 CDR1P51861 262 aa15.99■□□□□ 0.15
PNKP-218ENST00000625299 CYP4F8P98187 520 aa15.99■□□□□ 0.15
PNKP-218ENST00000625299 NBR1Q14596 966 aa15.99■□□□□ 0.15
PNKP-218ENST00000625299 STPG1Q5TH74 334 aa15.99■□□□□ 0.15
PNKP-218ENST00000625299 PKN3Q6P5Z2 889 aa15.99■□□□□ 0.15
PNKP-218ENST00000625299 GAREM2Q75VX8 874 aa15.99■□□□□ 0.15
PNKP-218ENST00000625299 CACNA2D4Q7Z3S7 1137 aa15.99■□□□□ 0.15
PNKP-218ENST00000625299 TTC9BQ8N6N2 239 aa15.99■□□□□ 0.15
PNKP-218ENST00000625299 GAB3Q8WWW8 586 aa15.99■□□□□ 0.15
PNKP-218ENST00000625299 KIF12Q96FN5 646 aa15.99■□□□□ 0.15
PNKP-218ENST00000625299 MKNK1Q9BUB5 465 aa15.99■□□□□ 0.15
PNKP-218ENST00000625299 RUSC1Q9BVN2 902 aa15.99■□□□□ 0.15
PNKP-218ENST00000625299 SMG9Q9H0W8 520 aaKnown RBP15.99■□□□□ 0.15
PNKP-218ENST00000625299 RBM19Q9Y4C8 960 aaKnown RBP15.99■□□□□ 0.15
PNKP-218ENST00000625299 MYH11P35749 1972 aa15.98■□□□□ 0.15
PNKP-218ENST00000625299 MTMR11A4FU01 709 aa15.98■□□□□ 0.15
PNKP-218ENST00000625299 OR6C75A6NL08 312 aa15.98■□□□□ 0.15
PNKP-218ENST00000625299 SFI1A8K8P3 1242 aa15.98■□□□□ 0.15
PNKP-218ENST00000625299 ZNF806P0C7X5 589 aa15.98■□□□□ 0.15
PNKP-218ENST00000625299 HOXA6P31267 233 aa15.98■□□□□ 0.15
PNKP-218ENST00000625299 FXR2P51116 673 aaKnown RBP eCLIP15.98■□□□□ 0.15
PNKP-218ENST00000625299 RAD51AP2Q09MP3 1159 aa15.98■□□□□ 0.15
PNKP-218ENST00000625299 GPR17Q13304 367 aa15.98■□□□□ 0.15
PNKP-218ENST00000625299 ORC2Q13416 577 aaPredicted RBP15.98■□□□□ 0.15
PNKP-218ENST00000625299 GNL2Q13823 731 aaKnown RBP15.98■□□□□ 0.15
PNKP-218ENST00000625299 CENPPQ6IPU0 288 aa15.98■□□□□ 0.15
PNKP-218ENST00000625299 DNAJB7Q7Z6W7 309 aaPredicted RBP15.98■□□□□ 0.15
PNKP-218ENST00000625299 SYNPOQ8N3V7 929 aa15.98■□□□□ 0.15
PNKP-218ENST00000625299 ATAD1Q8NBU5 361 aa15.98■□□□□ 0.15
PNKP-218ENST00000625299 BPIFB1Q8TDL5 484 aa15.98■□□□□ 0.15
PNKP-218ENST00000625299 PSMG2Q969U7 264 aa15.98■□□□□ 0.15
PNKP-218ENST00000625299 SEPT5Q99719 369 aaPredicted RBP15.98■□□□□ 0.15
PNKP-218ENST00000625299 SLC8A2Q9UPR5 921 aa15.98■□□□□ 0.15
PNKP-218ENST00000625299 DNM3Q9UQ16 869 aa15.98■□□□□ 0.15
PNKP-218ENST00000625299 FRYQ5TBA9 3013 aa15.97■□□□□ 0.15
PNKP-218ENST00000625299 TOM1L1O75674 476 aa15.97■□□□□ 0.15
PNKP-218ENST00000625299 GUCY2FP51841 1108 aa15.97■□□□□ 0.15
PNKP-218ENST00000625299 PLCB2Q00722 1185 aa15.97■□□□□ 0.15
PNKP-218ENST00000625299 MAPK7Q13164 816 aa15.97■□□□□ 0.15
PNKP-218ENST00000625299 ZRSR1Q15695 479 aaKnown RBP15.97■□□□□ 0.15
PNKP-218ENST00000625299 ITPRIPL2Q3MIP1 535 aa15.97■□□□□ 0.15
PNKP-218ENST00000625299 OVOS1Q6IE37 1185 aa15.97■□□□□ 0.15
PNKP-218ENST00000625299 ITIH5Q86UX2 942 aa15.97■□□□□ 0.15
PNKP-218ENST00000625299 LOXL4Q96JB6 756 aa15.97■□□□□ 0.15
PNKP-218ENST00000625299 C8orf76Q96K31 380 aa15.97■□□□□ 0.15
PNKP-218ENST00000625299 GCNAQ96QF7 691 aa15.97■□□□□ 0.15
PNKP-218ENST00000625299 TMEM209Q96SK2 561 aa15.97■□□□□ 0.15
PNKP-218ENST00000625299 LPIN3Q9BQK8 851 aa15.97■□□□□ 0.15
PNKP-218ENST00000625299 OXCT2Q9BYC2 517 aaPredicted RBP15.97■□□□□ 0.15
PNKP-218ENST00000625299 THG1LQ9NWX6 298 aaKnown RBP15.97■□□□□ 0.15
PNKP-218ENST00000625299 ASB3Q9Y575 518 aa15.97■□□□□ 0.15
PNKP-218ENST00000625299 CEP295Q9C0D2 2601 aa15.97■□□□□ 0.15
PNKP-218ENST00000625299 EML5Q05BV3 1969 aa15.96■□□□□ 0.15
PNKP-218ENST00000625299 PP2D1A8MPX8 630 aa15.96■□□□□ 0.15
PNKP-218ENST00000625299 CLDN3O15551 220 aa15.96■□□□□ 0.15
PNKP-218ENST00000625299 KCNK5O95279 499 aa15.96■□□□□ 0.15
PNKP-218ENST00000625299 FGF19O95750 216 aa15.96■□□□□ 0.15
PNKP-218ENST00000625299 LRPAP1P30533 357 aa15.96■□□□□ 0.15
PNKP-218ENST00000625299 MPLP40238 635 aa15.96■□□□□ 0.15
PNKP-218ENST00000625299 RAP1GAPP47736 663 aa15.96■□□□□ 0.15
PNKP-218ENST00000625299 MCM2P49736 904 aa15.96■□□□□ 0.15
PNKP-218ENST00000625299 ANAPC15P60006 121 aa15.96■□□□□ 0.15
PNKP-218ENST00000625299 SHC2P98077 582 aa15.96■□□□□ 0.15
PNKP-218ENST00000625299 CACNB1Q02641 598 aaPredicted RBP15.96■□□□□ 0.15
PNKP-218ENST00000625299 PPP2R3AQ06190 1150 aa15.96■□□□□ 0.15
PNKP-218ENST00000625299 VEPH1Q14D04 833 aa15.96■□□□□ 0.15
PNKP-218ENST00000625299 RNF43Q68DV7 783 aa15.96■□□□□ 0.15
PNKP-218ENST00000625299 TCEAL6Q6IPX3 200 aa15.96■□□□□ 0.15
PNKP-218ENST00000625299 PSAPL1Q6NUJ1 521 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms