RNA–Protein interactions for RNA: ENST00000624953.1

CDKL5-208, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 567 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-208ENST00000624953 GZMKP49863 264 aa4.1□□□□□ -1.75
CDKL5-208ENST00000624953 TMF1P82094 1093 aa4.1□□□□□ -1.75
CDKL5-208ENST00000624953 ATP8B2P98198 1209 aa4.1□□□□□ -1.75
CDKL5-208ENST00000624953 SLC25A3Q00325 362 aa4.1□□□□□ -1.75
CDKL5-208ENST00000624953 TOR2AQ5JU69 321 aa4.1□□□□□ -1.75
CDKL5-208ENST00000624953 MFSD14BQ5SR56 506 aa4.1□□□□□ -1.75
CDKL5-208ENST00000624953 FNDC7Q5VTL7 733 aa4.1□□□□□ -1.75
CDKL5-208ENST00000624953 OR7D4Q8NG98 312 aa4.1□□□□□ -1.75
CDKL5-208ENST00000624953 OR2I1PQ8NGU4 316 aa4.1□□□□□ -1.75
CDKL5-208ENST00000624953 STAG1Q8WVM7 1258 aa4.1□□□□□ -1.75
CDKL5-208ENST00000624953 RIN2Q8WYP3 895 aaPredicted RBP4.1□□□□□ -1.75
CDKL5-208ENST00000624953 JADE3Q92613 823 aa4.1□□□□□ -1.75
CDKL5-208ENST00000624953 EXTL1Q92935 676 aa4.1□□□□□ -1.75
CDKL5-208ENST00000624953 IL17RAQ96F46 866 aa4.1□□□□□ -1.75
CDKL5-208ENST00000624953 CEP95Q96GE4 821 aa4.1□□□□□ -1.75
CDKL5-208ENST00000624953 SCAND2PQ9GZW5 306 aaPredicted RBP4.1□□□□□ -1.75
CDKL5-208ENST00000624953 RBM12Q9NTZ6 932 aaKnown RBP4.1□□□□□ -1.75
CDKL5-208ENST00000624953 TRHDEQ9UKU6 1024 aa4.1□□□□□ -1.75
CDKL5-208ENST00000624953 GIT1Q9Y2X7 761 aa4.1□□□□□ -1.75
CDKL5-208ENST00000624953 CHST2Q9Y4C5 530 aa4.1□□□□□ -1.75
CDKL5-208ENST00000624953 XDHP47989 1333 aa4.1□□□□□ -1.75
CDKL5-208ENST00000624953 PASKQ96RG2 1323 aa4.1□□□□□ -1.75
CDKL5-208ENST00000624953 USP42Q9H9J4 1324 aaKnown RBP4.1□□□□□ -1.75
CDKL5-208ENST00000624953 SMG6Q86US8 1419 aaKnown RBP4.1□□□□□ -1.75
CDKL5-208ENST00000624953 LAMB4A4D0S4 1761 aa4.09□□□□□ -1.75
CDKL5-208ENST00000624953 LAMB1P07942 1786 aa4.09□□□□□ -1.75
CDKL5-208ENST00000624953 PSME4Q14997 1843 aa4.09□□□□□ -1.75
CDKL5-208ENST00000624953 SUV39H1O43463 412 aa4.09□□□□□ -1.75
CDKL5-208ENST00000624953 ITGA10O75578 1167 aa4.09□□□□□ -1.75
CDKL5-208ENST00000624953 RPS6KA4O75676 772 aa4.09□□□□□ -1.75
CDKL5-208ENST00000624953 ZRANB2O95218 330 aaKnown RBP eCLIP4.09□□□□□ -1.75
CDKL5-208ENST00000624953 ZFP36P26651 326 aaKnown RBP4.09□□□□□ -1.75
CDKL5-208ENST00000624953 TM4SF1P30408 202 aa4.09□□□□□ -1.75
CDKL5-208ENST00000624953 FLT3LGP49771 235 aa4.09□□□□□ -1.75
CDKL5-208ENST00000624953 RGS19P49795 217 aa4.09□□□□□ -1.75
CDKL5-208ENST00000624953 GUCY2FP51841 1108 aa4.09□□□□□ -1.75
CDKL5-208ENST00000624953 SLC5A3P53794 718 aa4.09□□□□□ -1.75
CDKL5-208ENST00000624953 NPEPPSP55786 919 aa4.09□□□□□ -1.75
CDKL5-208ENST00000624953 DUSP2Q05923 314 aa4.09□□□□□ -1.75
CDKL5-208ENST00000624953 FOXE3Q13461 319 aa4.09□□□□□ -1.75
CDKL5-208ENST00000624953 RRP1BQ14684 758 aaKnown RBP4.09□□□□□ -1.75
CDKL5-208ENST00000624953 ELAVL1Q15717 326 aaKnown RBP4.09□□□□□ -1.75
CDKL5-208ENST00000624953 FAM214AQ32MH5 1076 aa4.09□□□□□ -1.75
CDKL5-208ENST00000624953 PRAMEF14Q5SWL7 426 aa4.09□□□□□ -1.75
CDKL5-208ENST00000624953 C16orf71Q8IYS4 520 aaPredicted RBP4.09□□□□□ -1.75
CDKL5-208ENST00000624953 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.09□□□□□ -1.75
CDKL5-208ENST00000624953 SH3RF3Q8TEJ3 882 aaPredicted RBP4.09□□□□□ -1.75
CDKL5-208ENST00000624953 CASKIN2Q8WXE0 1202 aa4.09□□□□□ -1.75
CDKL5-208ENST00000624953 RAPGEF4Q8WZA2 1011 aa4.09□□□□□ -1.75
CDKL5-208ENST00000624953 ST8SIA2Q92186 375 aa4.09□□□□□ -1.75
CDKL5-208ENST00000624953 TMEM176AQ96HP8 235 aa4.09□□□□□ -1.75
CDKL5-208ENST00000624953 ABHD8Q96I13 439 aa4.09□□□□□ -1.75
CDKL5-208ENST00000624953 COG3Q96JB2 828 aa4.09□□□□□ -1.75
CDKL5-208ENST00000624953 CCDC8Q9H0W5 538 aaPredicted RBP4.09□□□□□ -1.75
CDKL5-208ENST00000624953 TCF7L1Q9HCS4 588 aa4.09□□□□□ -1.75
CDKL5-208ENST00000624953 DNAJC28Q9NX36 388 aa4.09□□□□□ -1.75
CDKL5-208ENST00000624953 NOP58Q9Y2X3 529 aaKnown RBP4.09□□□□□ -1.75
CDKL5-208ENST00000624953 TNKSO95271 1327 aa4.09□□□□□ -1.75
CDKL5-208ENST00000624953 KIF24Q5T7B8 1368 aa4.09□□□□□ -1.75
CDKL5-208ENST00000624953 SNED1Q8TER0 1413 aa4.09□□□□□ -1.75
CDKL5-208ENST00000624953 MARCH11A6NNE9 402 aa4.08□□□□□ -1.76
CDKL5-208ENST00000624953 CAPN14A8MX76 684 aa4.08□□□□□ -1.76
CDKL5-208ENST00000624953 B5MCH6 92 aa4.08□□□□□ -1.76
CDKL5-208ENST00000624953 PJA2O43164 708 aa4.08□□□□□ -1.76
CDKL5-208ENST00000624953 ADCY6O43306 1168 aa4.08□□□□□ -1.76
CDKL5-208ENST00000624953 KATNA1O75449 491 aa4.08□□□□□ -1.76
CDKL5-208ENST00000624953 HSPA8P11142 646 aaKnown RBP4.08□□□□□ -1.76
CDKL5-208ENST00000624953 VEGFAP15692 232 aaPredicted RBP4.08□□□□□ -1.76
CDKL5-208ENST00000624953 EDNRBP24530 442 aa4.08□□□□□ -1.76
CDKL5-208ENST00000624953 ACVRL1P37023 503 aa4.08□□□□□ -1.76
CDKL5-208ENST00000624953 CRKLP46109 303 aaKnown RBP4.08□□□□□ -1.76
CDKL5-208ENST00000624953 LBX1P52954 281 aa4.08□□□□□ -1.76
CDKL5-208ENST00000624953 SP140Q13342 867 aa4.08□□□□□ -1.76
CDKL5-208ENST00000624953 USP39Q53GS9 565 aaKnown RBP4.08□□□□□ -1.76
CDKL5-208ENST00000624953 MUM1L1Q5H9M0 696 aa4.08□□□□□ -1.76
CDKL5-208ENST00000624953 ANKRD36CQ5JPF3 1778 aa4.08□□□□□ -1.76
CDKL5-208ENST00000624953 FAM47AQ5JRC9 791 aa4.08□□□□□ -1.76
CDKL5-208ENST00000624953 TMEM240Q5SV17 173 aa4.08□□□□□ -1.76
CDKL5-208ENST00000624953 WASHC2AQ641Q2 1341 aa4.08□□□□□ -1.76
CDKL5-208ENST00000624953 KRT40Q6A162 431 aa4.08□□□□□ -1.76
CDKL5-208ENST00000624953 Q6ZPA2 131 aa4.08□□□□□ -1.76
CDKL5-208ENST00000624953 SYT12Q8IV01 421 aa4.08□□□□□ -1.76
CDKL5-208ENST00000624953 PALM2Q8IXS6 379 aa4.08□□□□□ -1.76
CDKL5-208ENST00000624953 FUBP3Q96I24 572 aaKnown RBP eCLIP4.08□□□□□ -1.76
CDKL5-208ENST00000624953 FAXDC2Q96IV6 333 aa4.08□□□□□ -1.76
CDKL5-208ENST00000624953 PUS7Q96PZ0 661 aaKnown RBP4.08□□□□□ -1.76
CDKL5-208ENST00000624953 MNTQ99583 582 aa4.08□□□□□ -1.76
CDKL5-208ENST00000624953 ACE2Q9BYF1 805 aaPredicted RBP4.08□□□□□ -1.76
CDKL5-208ENST00000624953 DMRT3Q9NQL9 472 aa4.08□□□□□ -1.76
CDKL5-208ENST00000624953 TERF2IPQ9NYB0 399 aa4.08□□□□□ -1.76
CDKL5-208ENST00000624953 TMOD3Q9NYL9 352 aa4.08□□□□□ -1.76
CDKL5-208ENST00000624953 RCAN3Q9UKA8 241 aa4.08□□□□□ -1.76
CDKL5-208ENST00000624953 SPEF1Q9Y4P9 236 aa4.08□□□□□ -1.76
CDKL5-208ENST00000624953 IPPQ9Y573 584 aa4.08□□□□□ -1.76
CDKL5-208ENST00000624953 SCN9AQ15858 1988 aa4.07□□□□□ -1.76
CDKL5-208ENST00000624953 PAPPA2Q9BXP8 1791 aa4.07□□□□□ -1.76
CDKL5-208ENST00000624953 SHTN1A0MZ66 631 aa4.07□□□□□ -1.76
CDKL5-208ENST00000624953 IPO13O94829 963 aaKnown RBP4.07□□□□□ -1.76
CDKL5-208ENST00000624953 AMY1AP04745 511 aa4.07□□□□□ -1.76
CDKL5-208ENST00000624953 C1SP09871 688 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms