RNA–Protein interactions for RNA: ENST00000623185.3

LINC00963-216, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 786 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-216ENST00000623185 METTL23Q86XA0 190 aa13.37□□□□□ -0.27
LINC00963-216ENST00000623185 MRPL43Q8N983 215 aaKnown RBP13.37□□□□□ -0.27
LINC00963-216ENST00000623185 TATDN2Q93075 761 aa13.37□□□□□ -0.27
LINC00963-216ENST00000623185 JAKMIP2Q96AA8 810 aa13.37□□□□□ -0.27
LINC00963-216ENST00000623185 ERGIC2Q96RQ1 377 aa13.37□□□□□ -0.27
LINC00963-216ENST00000623185 PI4K2AQ9BTU6 479 aa13.37□□□□□ -0.27
LINC00963-216ENST00000623185 HERC2P3Q9BVR0 1158 aa13.37□□□□□ -0.27
LINC00963-216ENST00000623185 VN1R3Q9BXE9 311 aa13.37□□□□□ -0.27
LINC00963-216ENST00000623185 TTYH1Q9H313 450 aaPredicted RBP13.37□□□□□ -0.27
LINC00963-216ENST00000623185 CERS4Q9HA82 394 aa13.37□□□□□ -0.27
LINC00963-216ENST00000623185 APOBEC3GQ9HC16 384 aaKnown RBP13.37□□□□□ -0.27
LINC00963-216ENST00000623185 NXF1Q9UBU9 619 aaKnown RBP13.37□□□□□ -0.27
LINC00963-216ENST00000623185 TRIP11Q15643 1979 aa13.36□□□□□ -0.27
LINC00963-216ENST00000623185 H7C4K7 107 aa13.36□□□□□ -0.27
LINC00963-216ENST00000623185 CXCL14O95715 111 aa13.36□□□□□ -0.27
LINC00963-216ENST00000623185 POU3F3P20264 500 aaPredicted RBP13.36□□□□□ -0.27
LINC00963-216ENST00000623185 ERVFC1P60507 584 aa13.36□□□□□ -0.27
LINC00963-216ENST00000623185 NOP14P78316 857 aaKnown RBP13.36□□□□□ -0.27
LINC00963-216ENST00000623185 PTPROQ16827 1216 aa13.36□□□□□ -0.27
LINC00963-216ENST00000623185 ZNF697Q5TEC3 545 aa13.36□□□□□ -0.27
LINC00963-216ENST00000623185 TRIM65Q6PJ69 517 aa13.36□□□□□ -0.27
LINC00963-216ENST00000623185 TMC7Q7Z402 723 aa13.36□□□□□ -0.27
LINC00963-216ENST00000623185 CEP57Q86XR8 500 aa13.36□□□□□ -0.27
LINC00963-216ENST00000623185 THEM5Q8N1Q8 247 aa13.36□□□□□ -0.27
LINC00963-216ENST00000623185 TTC39CQ8N584 583 aa13.36□□□□□ -0.27
LINC00963-216ENST00000623185 LNX1Q8TBB1 728 aaPredicted RBP13.36□□□□□ -0.27
LINC00963-216ENST00000623185 PIK3R5Q8WYR1 880 aa13.36□□□□□ -0.27
LINC00963-216ENST00000623185 LRCH3Q96II8 777 aa13.36□□□□□ -0.27
LINC00963-216ENST00000623185 NT5C1BQ96P26 610 aa13.36□□□□□ -0.27
LINC00963-216ENST00000623185 MMS19Q96T76 1030 aa13.36□□□□□ -0.27
LINC00963-216ENST00000623185 CRACR2AQ9BSW2 395 aa13.36□□□□□ -0.27
LINC00963-216ENST00000623185 BCO2Q9BYV7 579 aa13.36□□□□□ -0.27
LINC00963-216ENST00000623185 INTS2Q9H0H0 1204 aaKnown RBP13.36□□□□□ -0.27
LINC00963-216ENST00000623185 ZBP1Q9H171 429 aa13.36□□□□□ -0.27
LINC00963-216ENST00000623185 RXFP1Q9HBX9 757 aa13.36□□□□□ -0.27
LINC00963-216ENST00000623185 PLCB1Q9NQ66 1216 aa13.36□□□□□ -0.27
LINC00963-216ENST00000623185 TLR9Q9NR96 1032 aa13.36□□□□□ -0.27
LINC00963-216ENST00000623185 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.36□□□□□ -0.27
LINC00963-216ENST00000623185 MRPL17Q9NRX2 175 aaKnown RBP13.36□□□□□ -0.27
LINC00963-216ENST00000623185 FNIP2Q9P278 1114 aa13.36□□□□□ -0.27
LINC00963-216ENST00000623185 BACE2Q9Y5Z0 518 aa13.36□□□□□ -0.27
LINC00963-216ENST00000623185 ANK1P16157 1881 aa13.36□□□□□ -0.27
LINC00963-216ENST00000623185 TDRD15B5MCY1 1934 aaKnown RBP13.35□□□□□ -0.27
LINC00963-216ENST00000623185 A0A1W2PQC6 194 aa13.35□□□□□ -0.27
LINC00963-216ENST00000623185 I3L4J1 428 aa13.35□□□□□ -0.27
LINC00963-216ENST00000623185 FSCN2O14926 492 aa13.35□□□□□ -0.27
LINC00963-216ENST00000623185 TEX33O43247 280 aa13.35□□□□□ -0.27
LINC00963-216ENST00000623185 TBC1D4O60343 1298 aa13.35□□□□□ -0.27
LINC00963-216ENST00000623185 LPXNO60711 386 aa13.35□□□□□ -0.27
LINC00963-216ENST00000623185 C1RP00736 705 aa13.35□□□□□ -0.27
LINC00963-216ENST00000623185 TPM3P06753 285 aa13.35□□□□□ -0.27
LINC00963-216ENST00000623185 TBXAS1P24557 533 aaPredicted RBP13.35□□□□□ -0.27
LINC00963-216ENST00000623185 DNAJB1P25685 340 aa13.35□□□□□ -0.27
LINC00963-216ENST00000623185 TKTP29401 623 aaKnown RBP13.35□□□□□ -0.27
LINC00963-216ENST00000623185 GNL1P36915 607 aaPredicted RBP13.35□□□□□ -0.27
LINC00963-216ENST00000623185 GLUD2P49448 558 aa13.35□□□□□ -0.27
LINC00963-216ENST00000623185 GCNT1Q02742 428 aa13.35□□□□□ -0.27
LINC00963-216ENST00000623185 YWHAHQ04917 246 aaPredicted RBP13.35□□□□□ -0.27
LINC00963-216ENST00000623185 WSCD1Q658N2 575 aa13.35□□□□□ -0.27
LINC00963-216ENST00000623185 SPOPLQ6IQ16 392 aa13.35□□□□□ -0.27
LINC00963-216ENST00000623185 PHLDB3Q6NSJ2 640 aa13.35□□□□□ -0.27
LINC00963-216ENST00000623185 DPY19L2P1Q6NXN4 242 aa13.35□□□□□ -0.27
LINC00963-216ENST00000623185 SARM1Q6SZW1 724 aa13.35□□□□□ -0.27
LINC00963-216ENST00000623185 ENOSF1Q7L5Y1 443 aa13.35□□□□□ -0.27
LINC00963-216ENST00000623185 PDCL2Q8N4E4 241 aa13.35□□□□□ -0.27
LINC00963-216ENST00000623185 MICAL1Q8TDZ2 1067 aa13.35□□□□□ -0.27
LINC00963-216ENST00000623185 ACBD6Q9BR61 282 aa13.35□□□□□ -0.27
LINC00963-216ENST00000623185 NIF3L1Q9GZT8 377 aa13.35□□□□□ -0.27
LINC00963-216ENST00000623185 GCNT4Q9P109 453 aa13.35□□□□□ -0.27
LINC00963-216ENST00000623185 L1RE1Q9UN81 338 aa13.35□□□□□ -0.27
LINC00963-216ENST00000623185 DAAM1Q9Y4D1 1078 aa13.35□□□□□ -0.27
LINC00963-216ENST00000623185 RALGAPA2Q2PPJ7 1873 aa13.35□□□□□ -0.27
LINC00963-216ENST00000623185 RANBP2P49792 3224 aaKnown RBP13.34□□□□□ -0.27
LINC00963-216ENST00000623185 EPOPA6NHQ4 379 aa13.34□□□□□ -0.27
LINC00963-216ENST00000623185 CBFA2T2O43439 604 aa13.34□□□□□ -0.27
LINC00963-216ENST00000623185 URODP06132 367 aa13.34□□□□□ -0.27
LINC00963-216ENST00000623185 WARSP23381 471 aaKnown RBP13.34□□□□□ -0.27
LINC00963-216ENST00000623185 ASPAP45381 313 aa13.34□□□□□ -0.27
LINC00963-216ENST00000623185 MFAP3P55082 362 aa13.34□□□□□ -0.27
LINC00963-216ENST00000623185 CREMQ03060 361 aa13.34□□□□□ -0.27
LINC00963-216ENST00000623185 CUL2Q13617 745 aa13.34□□□□□ -0.27
LINC00963-216ENST00000623185 SMC1AQ14683 1233 aaKnown RBP13.34□□□□□ -0.27
LINC00963-216ENST00000623185 GRIN2CQ14957 1233 aa13.34□□□□□ -0.27
LINC00963-216ENST00000623185 RTP2Q5QGT7 225 aa13.34□□□□□ -0.27
LINC00963-216ENST00000623185 VARS2Q5ST30 1063 aaKnown RBP13.34□□□□□ -0.27
LINC00963-216ENST00000623185 KLHDC7AQ5VTJ3 777 aa13.34□□□□□ -0.27
LINC00963-216ENST00000623185 OVOS1Q6IE37 1185 aa13.34□□□□□ -0.27
LINC00963-216ENST00000623185 UNC93AQ86WB7 457 aa13.34□□□□□ -0.27
LINC00963-216ENST00000623185 RIN2Q8WYP3 895 aaPredicted RBP13.34□□□□□ -0.27
LINC00963-216ENST00000623185 MRPL38Q96DV4 380 aaKnown RBP13.34□□□□□ -0.27
LINC00963-216ENST00000623185 TCF25Q9BQ70 676 aa13.34□□□□□ -0.27
LINC00963-216ENST00000623185 UBE2TQ9NPD8 197 aaPredicted RBP13.34□□□□□ -0.27
LINC00963-216ENST00000623185 IFNKQ9P0W0 207 aa13.34□□□□□ -0.27
LINC00963-216ENST00000623185 APEX2Q9UBZ4 518 aa13.34□□□□□ -0.27
LINC00963-216ENST00000623185 FBXL5Q9UKA1 691 aa13.34□□□□□ -0.27
LINC00963-216ENST00000623185 POLIQ9UNA4 740 aa13.34□□□□□ -0.27
LINC00963-216ENST00000623185 SIK3Q9Y2K2 1263 aa13.34□□□□□ -0.27
LINC00963-216ENST00000623185 TIMM13Q9Y5L4 95 aaPredicted RBP13.34□□□□□ -0.27
LINC00963-216ENST00000623185 C2orf71A6NGG8 1288 aa13.33□□□□□ -0.28
LINC00963-216ENST00000623185 OR6C75A6NL08 312 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms