RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 PRELID2Q8N945 189 aa13.16□□□□□ -0.3
LITAF-221ENST00000622633 PLEKHO2Q8TD55 490 aa13.16□□□□□ -0.3
LITAF-221ENST00000622633 HNRNPABQ99729 332 aaKnown RBP13.16□□□□□ -0.3
LITAF-221ENST00000622633 SH3GL1Q99961 368 aa13.16□□□□□ -0.3
LITAF-221ENST00000622633 DDX23Q9BUQ8 820 aaKnown RBP13.16□□□□□ -0.3
LITAF-221ENST00000622633 EPB41L4BQ9H329 900 aa13.16□□□□□ -0.3
LITAF-221ENST00000622633 SAMD15Q9P1V8 674 aa13.16□□□□□ -0.3
LITAF-221ENST00000622633 HERC5Q9UII4 1024 aaKnown RBP13.16□□□□□ -0.3
LITAF-221ENST00000622633 PNMA3Q9UL41 463 aa13.16□□□□□ -0.3
LITAF-221ENST00000622633 ZBTB21Q9ULJ3 1066 aa13.16□□□□□ -0.3
LITAF-221ENST00000622633 ATMINO43313 823 aaPredicted RBP13.16□□□□□ -0.3
LITAF-221ENST00000622633 ASMTLO95671 621 aa13.16□□□□□ -0.3
LITAF-221ENST00000622633 COMTP21964 271 aa13.16□□□□□ -0.3
LITAF-221ENST00000622633 PTGIRP43119 386 aa13.16□□□□□ -0.3
LITAF-221ENST00000622633 CCT8P50990 548 aa13.16□□□□□ -0.3
LITAF-221ENST00000622633 INTS8Q75QN2 995 aaKnown RBP13.16□□□□□ -0.3
LITAF-221ENST00000622633 CPNE8Q86YQ8 564 aa13.16□□□□□ -0.3
LITAF-221ENST00000622633 FBXO25Q8TCJ0 367 aa13.16□□□□□ -0.3
LITAF-221ENST00000622633 ATP6V0A1Q93050 837 aa13.16□□□□□ -0.3
LITAF-221ENST00000622633 EIF2AQ9BY44 585 aaKnown RBP13.16□□□□□ -0.3
LITAF-221ENST00000622633 MTFR1LQ9H019 292 aa13.16□□□□□ -0.3
LITAF-221ENST00000622633 QTRT2Q9H974 415 aaKnown RBP13.16□□□□□ -0.3
LITAF-221ENST00000622633 PNMA2Q9UL42 364 aa13.16□□□□□ -0.3
LITAF-221ENST00000622633 TBC1D30Q9Y2I9 924 aa13.16□□□□□ -0.3
LITAF-221ENST00000622633 TLDC2A0PJX2 215 aa13.15□□□□□ -0.3
LITAF-221ENST00000622633 TMEM150BA6NC51 233 aa13.15□□□□□ -0.3
LITAF-221ENST00000622633 GOLGA8IPA6NC78 632 aa13.15□□□□□ -0.3
LITAF-221ENST00000622633 GOLGA8JA6NMD2 632 aa13.15□□□□□ -0.3
LITAF-221ENST00000622633 H0YIN7 160 aa13.15□□□□□ -0.3
LITAF-221ENST00000622633 SPTLC1O15269 473 aa13.15□□□□□ -0.3
LITAF-221ENST00000622633 CHRNB2P17787 502 aa13.15□□□□□ -0.3
LITAF-221ENST00000622633 RTP1P59025 263 aa13.15□□□□□ -0.3
LITAF-221ENST00000622633 CETN1Q12798 172 aa13.15□□□□□ -0.3
LITAF-221ENST00000622633 FXNQ16595 210 aa13.15□□□□□ -0.3
LITAF-221ENST00000622633 EPC2Q52LR7 807 aa13.15□□□□□ -0.3
LITAF-221ENST00000622633 C3orf62Q6ZUJ4 267 aa13.15□□□□□ -0.3
LITAF-221ENST00000622633 KRT27Q7Z3Y8 459 aa13.15□□□□□ -0.3
LITAF-221ENST00000622633 UBL4BQ8N7F7 174 aa13.15□□□□□ -0.3
LITAF-221ENST00000622633 TLCD1Q96CP7 247 aa13.15□□□□□ -0.3
LITAF-221ENST00000622633 ACCSQ96QU6 501 aa13.15□□□□□ -0.3
LITAF-221ENST00000622633 TUBGCP5Q96RT8 1024 aa13.15□□□□□ -0.3
LITAF-221ENST00000622633 RIT2Q99578 217 aa13.15□□□□□ -0.3
LITAF-221ENST00000622633 DDX50Q9BQ39 737 aaKnown RBP13.15□□□□□ -0.3
LITAF-221ENST00000622633 ZSWIM1Q9BR11 485 aa13.15□□□□□ -0.3
LITAF-221ENST00000622633 GLIS2Q9BZE0 524 aaPredicted RBP13.15□□□□□ -0.3
LITAF-221ENST00000622633 SLC7A5P2Q9GIP4 190 aa13.15□□□□□ -0.3
LITAF-221ENST00000622633 COL20A1Q9P218 1284 aa13.15□□□□□ -0.3
LITAF-221ENST00000622633 LARSQ9P2J5 1176 aaKnown RBP13.15□□□□□ -0.3
LITAF-221ENST00000622633 TCRBV7S2A1N4TA0A589 114 aa13.15□□□□□ -0.3
LITAF-221ENST00000622633 SMIM23A6NLE4 172 aa13.15□□□□□ -0.3
LITAF-221ENST00000622633 YDJCA8MPS7 323 aa13.15□□□□□ -0.3
LITAF-221ENST00000622633 PHF2O75151 1096 aa13.15□□□□□ -0.3
LITAF-221ENST00000622633 RFX1P22670 979 aa13.15□□□□□ -0.3
LITAF-221ENST00000622633 GALK1P51570 392 aa13.15□□□□□ -0.3
LITAF-221ENST00000622633 EMP3P54852 163 aa13.15□□□□□ -0.3
LITAF-221ENST00000622633 EIF3BP55884 814 aaKnown RBP13.15□□□□□ -0.3
LITAF-221ENST00000622633 PDE1BQ01064 536 aa13.15□□□□□ -0.3
LITAF-221ENST00000622633 DHX34Q14147 1143 aaKnown RBP13.15□□□□□ -0.3
LITAF-221ENST00000622633 UBAP2Q5T6F2 1119 aaKnown RBP13.15□□□□□ -0.3
LITAF-221ENST00000622633 C11orf63Q6NUN7 778 aa13.15□□□□□ -0.3
LITAF-221ENST00000622633 TTC27Q6P3X3 843 aa13.15□□□□□ -0.3
LITAF-221ENST00000622633 WDR75Q8IWA0 830 aaKnown RBP13.15□□□□□ -0.3
LITAF-221ENST00000622633 CDAN1Q8IWY9 1227 aa13.15□□□□□ -0.3
LITAF-221ENST00000622633 IL31RAQ8NI17 732 aa13.15□□□□□ -0.3
LITAF-221ENST00000622633 BTBD6Q96KE9 485 aa13.15□□□□□ -0.3
LITAF-221ENST00000622633 ZMAT2Q96NC0 199 aaKnown RBP13.15□□□□□ -0.3
LITAF-221ENST00000622633 NUDCD1Q96RS6 583 aa13.15□□□□□ -0.3
LITAF-221ENST00000622633 KCNH7Q9NS40 1196 aa13.15□□□□□ -0.3
LITAF-221ENST00000622633 HSPBP1Q9NZL4 362 aa13.15□□□□□ -0.3
LITAF-221ENST00000622633 PRELID1Q9Y255 219 aa13.15□□□□□ -0.3
LITAF-221ENST00000622633 TDRKHQ9Y2W6 561 aaKnown RBP13.15□□□□□ -0.3
LITAF-221ENST00000622633 ZHX2Q9Y6X8 837 aa13.15□□□□□ -0.3
LITAF-221ENST00000622633 KANSL1LA0AUZ9 987 aa13.14□□□□□ -0.31
LITAF-221ENST00000622633 A6NJR5 290 aa13.14□□□□□ -0.31
LITAF-221ENST00000622633 CYP26A1O43174 497 aa13.14□□□□□ -0.31
LITAF-221ENST00000622633 SERPINB7O75635 380 aa13.14□□□□□ -0.31
LITAF-221ENST00000622633 VAV1P15498 845 aa13.14□□□□□ -0.31
LITAF-221ENST00000622633 ENDOUP21128 410 aaKnown RBP13.14□□□□□ -0.31
LITAF-221ENST00000622633 RXRBP28702 533 aa13.14□□□□□ -0.31
LITAF-221ENST00000622633 RPL21P46778 160 aaKnown RBP13.14□□□□□ -0.31
LITAF-221ENST00000622633 HADHBP55084 474 aaKnown RBP13.14□□□□□ -0.31
LITAF-221ENST00000622633 MAP7Q14244 749 aa13.14□□□□□ -0.31
LITAF-221ENST00000622633 INAQ16352 499 aa13.14□□□□□ -0.31
LITAF-221ENST00000622633 NOP9Q86U38 636 aaKnown RBP13.14□□□□□ -0.31
LITAF-221ENST00000622633 SPATA24Q86W54 205 aa13.14□□□□□ -0.31
LITAF-221ENST00000622633 TMCO5AQ8N6Q1 288 aa13.14□□□□□ -0.31
LITAF-221ENST00000622633 XXYLT1Q8NBI6 393 aa13.14□□□□□ -0.31
LITAF-221ENST00000622633 PABPC3Q9H361 631 aaKnown RBP13.14□□□□□ -0.31
LITAF-221ENST00000622633 TUT1Q9H6E5 874 aaKnown RBP13.14□□□□□ -0.31
LITAF-221ENST00000622633 TMEM206Q9H813 350 aa13.14□□□□□ -0.31
LITAF-221ENST00000622633 GPRC5CQ9NQ84 441 aa13.14□□□□□ -0.31
LITAF-221ENST00000622633 MKS1Q9NXB0 559 aa13.14□□□□□ -0.31
LITAF-221ENST00000622633 GRHL1Q9NZI5 618 aa13.14□□□□□ -0.31
LITAF-221ENST00000622633 TMOD2Q9NZR1 351 aa13.14□□□□□ -0.31
LITAF-221ENST00000622633 RASAL2Q9UJF2 1139 aa13.14□□□□□ -0.31
LITAF-221ENST00000622633 COL11A2P13942 1736 aaPredicted RBP13.14□□□□□ -0.31
LITAF-221ENST00000622633 MIF4GDA9UHW6 222 aaKnown RBP13.14□□□□□ -0.31
LITAF-221ENST00000622633 OAS1P00973 400 aaKnown RBP13.14□□□□□ -0.31
LITAF-221ENST00000622633 P4HBP07237 508 aaKnown RBP13.14□□□□□ -0.31
LITAF-221ENST00000622633 SKIP12755 728 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms