RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 CLEC11AQ9Y240 323 aa8.33□□□□□ -1.08
VPS11-209ENST00000622309 NR2E3Q9Y5X4 410 aa8.33□□□□□ -1.08
VPS11-209ENST00000622309 MRC1P22897 1456 aa8.33□□□□□ -1.08
VPS11-209ENST00000622309 ERVV-2B6SEH9 535 aa8.33□□□□□ -1.08
VPS11-209ENST00000622309 MAGEB2O15479 319 aa8.33□□□□□ -1.08
VPS11-209ENST00000622309 FKBP6O75344 327 aa8.33□□□□□ -1.08
VPS11-209ENST00000622309 IDH1O75874 414 aaKnown RBP8.33□□□□□ -1.08
VPS11-209ENST00000622309 S100BP04271 92 aaPredicted RBP8.33□□□□□ -1.08
VPS11-209ENST00000622309 VCPP55072 806 aaKnown RBP8.33□□□□□ -1.08
VPS11-209ENST00000622309 PFKPQ01813 784 aa8.33□□□□□ -1.08
VPS11-209ENST00000622309 STK4Q13043 487 aa8.33□□□□□ -1.08
VPS11-209ENST00000622309 CLUL1Q15846 466 aa8.33□□□□□ -1.08
VPS11-209ENST00000622309 ARL13BQ3SXY8 428 aa8.33□□□□□ -1.08
VPS11-209ENST00000622309 CABP7Q86V35 215 aa8.33□□□□□ -1.08
VPS11-209ENST00000622309 CCDC68Q9H2F9 335 aa8.33□□□□□ -1.08
VPS11-209ENST00000622309 Q9H521 79 aa8.33□□□□□ -1.08
VPS11-209ENST00000622309 GID8Q9NWU2 228 aa8.33□□□□□ -1.08
VPS11-209ENST00000622309 TMOD2Q9NZR1 351 aa8.33□□□□□ -1.08
VPS11-209ENST00000622309 C6orf203Q9P0P8 240 aaPredicted RBP8.33□□□□□ -1.08
VPS11-209ENST00000622309 HEY2Q9UBP5 337 aa8.33□□□□□ -1.08
VPS11-209ENST00000622309 A0A0G2JND7 137 aa8.33□□□□□ -1.08
VPS11-209ENST00000622309 FAM47E-STBD1D6RA91 191 aa8.33□□□□□ -1.08
VPS11-209ENST00000622309 hCG_1984214I3L0E3 225 aa8.33□□□□□ -1.08
VPS11-209ENST00000622309 WDR4P57081 412 aaKnown RBP8.33□□□□□ -1.08
VPS11-209ENST00000622309 WTAPQ15007 396 aa8.33□□□□□ -1.08
VPS11-209ENST00000622309 SFT2D3Q587I9 215 aa8.33□□□□□ -1.08
VPS11-209ENST00000622309 PCNX4Q63HM2 1172 aa8.33□□□□□ -1.08
VPS11-209ENST00000622309 ALKBH5Q6P6C2 394 aaKnown RBP8.33□□□□□ -1.08
VPS11-209ENST00000622309 ISLR2Q6UXK2 745 aa8.33□□□□□ -1.08
VPS11-209ENST00000622309 VPS36Q86VN1 386 aa8.33□□□□□ -1.08
VPS11-209ENST00000622309 GSDMBQ8TAX9 411 aa8.33□□□□□ -1.08
VPS11-209ENST00000622309 ZFPM2Q8WW38 1151 aa8.33□□□□□ -1.08
VPS11-209ENST00000622309 NELL2Q99435 816 aa8.33□□□□□ -1.08
VPS11-209ENST00000622309 OSBPL6Q9BZF3 934 aa8.33□□□□□ -1.08
VPS11-209ENST00000622309 ARMC7Q9H6L4 198 aa8.33□□□□□ -1.08
VPS11-209ENST00000622309 ZNHIT2Q9UHR6 403 aa8.33□□□□□ -1.08
VPS11-209ENST00000622309 B2RBV5 119 aa8.32□□□□□ -1.08
VPS11-209ENST00000622309 RNASEH2AO75792 299 aaKnown RBP8.32□□□□□ -1.08
VPS11-209ENST00000622309 H2AFZP0C0S5 128 aa8.32□□□□□ -1.08
VPS11-209ENST00000622309 SMIM18P0DKX4 95 aa8.32□□□□□ -1.08
VPS11-209ENST00000622309 ZNF12P17014 697 aa8.32□□□□□ -1.08
VPS11-209ENST00000622309 ADORA1P30542 326 aa8.32□□□□□ -1.08
VPS11-209ENST00000622309 STT3AP46977 705 aa8.32□□□□□ -1.08
VPS11-209ENST00000622309 RAP1GDS1P52306 607 aa8.32□□□□□ -1.08
VPS11-209ENST00000622309 AQP4P55087 323 aa8.32□□□□□ -1.08
VPS11-209ENST00000622309 CASP7P55210 303 aa8.32□□□□□ -1.08
VPS11-209ENST00000622309 NUP107P57740 925 aa8.32□□□□□ -1.08
VPS11-209ENST00000622309 XIAPP98170 497 aa8.32□□□□□ -1.08
VPS11-209ENST00000622309 NR1D2Q14995 579 aa8.32□□□□□ -1.08
VPS11-209ENST00000622309 CNNM4Q6P4Q7 775 aa8.32□□□□□ -1.08
VPS11-209ENST00000622309 UGT2A3Q6UWM9 527 aa8.32□□□□□ -1.08
VPS11-209ENST00000622309 H2AFVQ71UI9 128 aa8.32□□□□□ -1.08
VPS11-209ENST00000622309 NT5DC3Q86UY8 548 aa8.32□□□□□ -1.08
VPS11-209ENST00000622309 NKX2-3Q8TAU0 364 aa8.32□□□□□ -1.08
VPS11-209ENST00000622309 C18orf8Q96DM3 657 aa8.32□□□□□ -1.08
VPS11-209ENST00000622309 PTCD3Q96EY7 689 aaKnown RBP8.32□□□□□ -1.08
VPS11-209ENST00000622309 NUP85Q9BW27 656 aa8.32□□□□□ -1.08
VPS11-209ENST00000622309 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.32□□□□□ -1.08
VPS11-209ENST00000622309 ARPP21Q9UBL0 812 aaPredicted RBP8.32□□□□□ -1.08
VPS11-209ENST00000622309 PPM1HQ9ULR3 514 aa8.32□□□□□ -1.08
VPS11-209ENST00000622309 ATF5Q9Y2D1 282 aaPredicted RBP8.32□□□□□ -1.08
VPS11-209ENST00000622309 MAD1L1Q9Y6D9 718 aa8.32□□□□□ -1.08
VPS11-209ENST00000622309 RSPH10B2B2RC85 870 aa8.32□□□□□ -1.08
VPS11-209ENST00000622309 H3BSA7 217 aa8.32□□□□□ -1.08
VPS11-209ENST00000622309 THAP12O43422 761 aa8.32□□□□□ -1.08
VPS11-209ENST00000622309 CDH16O75309 829 aa8.32□□□□□ -1.08
VPS11-209ENST00000622309 PRDM1O75626 825 aa8.32□□□□□ -1.08
VPS11-209ENST00000622309 RSPH10BP0C881 870 aa8.32□□□□□ -1.08
VPS11-209ENST00000622309 FCER1AP12319 257 aa8.32□□□□□ -1.08
VPS11-209ENST00000622309 CHRNA3P32297 505 aa8.32□□□□□ -1.08
VPS11-209ENST00000622309 TUBA4AP68366 448 aa8.32□□□□□ -1.08
VPS11-209ENST00000622309 IRX4P78413 519 aa8.32□□□□□ -1.08
VPS11-209ENST00000622309 ZNF211Q13398 564 aaPredicted RBP8.32□□□□□ -1.08
VPS11-209ENST00000622309 GRAMD1BQ3KR37 738 aa8.32□□□□□ -1.08
VPS11-209ENST00000622309 RGS9BPQ6ZS82 235 aa8.32□□□□□ -1.08
VPS11-209ENST00000622309 DHDDSQ86SQ9 333 aa8.32□□□□□ -1.08
VPS11-209ENST00000622309 CCDC105Q8IYK2 499 aa8.32□□□□□ -1.08
VPS11-209ENST00000622309 LILRB2Q8N423 598 aa8.32□□□□□ -1.08
VPS11-209ENST00000622309 METTL25Q8N6Q8 603 aa8.32□□□□□ -1.08
VPS11-209ENST00000622309 ZNF398Q8TD17 642 aa8.32□□□□□ -1.08
VPS11-209ENST00000622309 MTBPQ96DY7 904 aa8.32□□□□□ -1.08
VPS11-209ENST00000622309 NEURL2Q9BR09 285 aa8.32□□□□□ -1.08
VPS11-209ENST00000622309 OSBPL8Q9BZF1 889 aa8.32□□□□□ -1.08
VPS11-209ENST00000622309 PAIP1Q9H074 479 aaKnown RBP8.32□□□□□ -1.08
VPS11-209ENST00000622309 RBM38Q9H0Z9 239 aaKnown RBP8.32□□□□□ -1.08
VPS11-209ENST00000622309 ERVK-5Q9HDB9 667 aa8.32□□□□□ -1.08
VPS11-209ENST00000622309 GIN1Q9NXP7 522 aa8.32□□□□□ -1.08
VPS11-209ENST00000622309 ZSWIM5Q9P217 1185 aa8.32□□□□□ -1.08
VPS11-209ENST00000622309 ANKFY1Q9P2R3 1169 aa8.32□□□□□ -1.08
VPS11-209ENST00000622309 RSL24D1Q9UHA3 163 aaKnown RBP8.32□□□□□ -1.08
VPS11-209ENST00000622309 NAALADL1Q9UQQ1 740 aa8.32□□□□□ -1.08
VPS11-209ENST00000622309 SSX2IPQ9Y2D8 614 aa8.32□□□□□ -1.08
VPS11-209ENST00000622309 ADGRA3Q8IWK6 1321 aa8.32□□□□□ -1.08
VPS11-209ENST00000622309 NOTOA8MTQ0 251 aa8.31□□□□□ -1.08
VPS11-209ENST00000622309 AP1G1O43747 822 aa8.31□□□□□ -1.08
VPS11-209ENST00000622309 MAGEC1O60732 1142 aa8.31□□□□□ -1.08
VPS11-209ENST00000622309 DGKIO75912 1065 aa8.31□□□□□ -1.08
VPS11-209ENST00000622309 HSD17B7P56937 341 aa8.31□□□□□ -1.08
VPS11-209ENST00000622309 FOLH1Q04609 750 aa8.31□□□□□ -1.08
VPS11-209ENST00000622309 TMED2Q15363 201 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms