RNA–Protein interactions for RNA: ENST00000622209.4

PMPCA-212, Transcript of peptidase, mitochondrial processing alpha subunit, humanhuman

TSL 1 (best)

Gene PMPCA, Length 1,013 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCA-212ENST00000622209 ASB7Q9H672 318 aa22.84■■□□□ 1.25
PMPCA-212ENST00000622209 DNMT3BQ9UBC3 853 aaKnown RBP22.84■■□□□ 1.25
PMPCA-212ENST00000622209 DMDP11532 3685 aa22.84■■□□□ 1.25
PMPCA-212ENST00000622209 TGFB1I1O43294 461 aa22.83■■□□□ 1.25
PMPCA-212ENST00000622209 EXTL3O43909 919 aa22.83■■□□□ 1.25
PMPCA-212ENST00000622209 PRPF40AO75400 957 aaKnown RBP22.83■■□□□ 1.25
PMPCA-212ENST00000622209 KIF20AO95235 890 aa22.83■■□□□ 1.25
PMPCA-212ENST00000622209 RPL9P32969 192 aaKnown RBP22.83■■□□□ 1.25
PMPCA-212ENST00000622209 ARPP19P56211 112 aa22.83■■□□□ 1.25
PMPCA-212ENST00000622209 GPC5P78333 572 aa22.83■■□□□ 1.25
PMPCA-212ENST00000622209 PNOCQ13519 176 aa22.83■■□□□ 1.25
PMPCA-212ENST00000622209 ZBTB6Q15916 424 aa22.83■■□□□ 1.25
PMPCA-212ENST00000622209 HS2ST1Q7LGA3 356 aa22.83■■□□□ 1.25
PMPCA-212ENST00000622209 NELFCDQ8IXH7 590 aa22.83■■□□□ 1.25
PMPCA-212ENST00000622209 CBWD1Q9BRT8 395 aa22.83■■□□□ 1.25
PMPCA-212ENST00000622209 FAM213AQ9BRX8 229 aa22.83■■□□□ 1.25
PMPCA-212ENST00000622209 ARHGEF3Q9NR81 526 aa22.83■■□□□ 1.25
PMPCA-212ENST00000622209 RMND1Q9NWS8 449 aa22.83■■□□□ 1.25
PMPCA-212ENST00000622209 DERAQ9Y315 318 aa22.83■■□□□ 1.25
PMPCA-212ENST00000622209 XPOTO43592 962 aaKnown RBP22.82■■□□□ 1.24
PMPCA-212ENST00000622209 SMC2O95347 1197 aa22.82■■□□□ 1.24
PMPCA-212ENST00000622209 CYP3A5P20815 502 aa22.82■■□□□ 1.24
PMPCA-212ENST00000622209 PABPC1LQ4VXU2 614 aaKnown RBP22.82■■□□□ 1.24
PMPCA-212ENST00000622209 VARS2Q5ST30 1063 aaKnown RBP22.82■■□□□ 1.24
PMPCA-212ENST00000622209 GOLGA5Q8TBA6 731 aa22.82■■□□□ 1.24
PMPCA-212ENST00000622209 ING5Q8WYH8 240 aa22.82■■□□□ 1.24
PMPCA-212ENST00000622209 FAM212AQ96EL1 285 aa22.82■■□□□ 1.24
PMPCA-212ENST00000622209 KIF12Q96FN5 646 aa22.82■■□□□ 1.24
PMPCA-212ENST00000622209 GSDMAQ96QA5 445 aa22.82■■□□□ 1.24
PMPCA-212ENST00000622209 PCIF1Q9H4Z3 704 aa22.82■■□□□ 1.24
PMPCA-212ENST00000622209 KIAA1586Q9HCI6 787 aa22.82■■□□□ 1.24
PMPCA-212ENST00000622209 SLC2A4RGQ9NR83 387 aa22.82■■□□□ 1.24
PMPCA-212ENST00000622209 AGPAT3Q9NRZ7 376 aa22.82■■□□□ 1.24
PMPCA-212ENST00000622209 NUB1Q9Y5A7 615 aa22.82■■□□□ 1.24
PMPCA-212ENST00000622209 CITO14578 2027 aa22.82■■□□□ 1.24
PMPCA-212ENST00000622209 CFAP54Q96N23 3096 aa22.81■■□□□ 1.24
PMPCA-212ENST00000622209 PRR23AA6NEV1 266 aa22.81■■□□□ 1.24
PMPCA-212ENST00000622209 IL18RAPO95256 599 aa22.81■■□□□ 1.24
PMPCA-212ENST00000622209 DCNP07585 359 aaKnown RBP22.81■■□□□ 1.24
PMPCA-212ENST00000622209 ROR1Q01973 937 aa22.81■■□□□ 1.24
PMPCA-212ENST00000622209 GPD1LQ8N335 351 aa22.81■■□□□ 1.24
PMPCA-212ENST00000622209 SPATA20Q8TB22 786 aa22.81■■□□□ 1.24
PMPCA-212ENST00000622209 UBQLN1Q9UMX0 589 aaKnown RBP22.81■■□□□ 1.24
PMPCA-212ENST00000622209 VPS13AQ96RL7 3174 aa22.81■■□□□ 1.24
PMPCA-212ENST00000622209 POU2F2P09086 479 aa22.8■■□□□ 1.24
PMPCA-212ENST00000622209 ELF1P32519 619 aa22.8■■□□□ 1.24
PMPCA-212ENST00000622209 SLC8B1Q6J4K2 584 aa22.8■■□□□ 1.24
PMPCA-212ENST00000622209 PHLDB3Q6NSJ2 640 aa22.8■■□□□ 1.24
PMPCA-212ENST00000622209 MTSS1LQ765P7 747 aa22.8■■□□□ 1.24
PMPCA-212ENST00000622209 C12orf56Q8IXR9 622 aa22.8■■□□□ 1.24
PMPCA-212ENST00000622209 ZNF461Q8TAF7 563 aa22.8■■□□□ 1.24
PMPCA-212ENST00000622209 NKD2Q969F2 451 aaPredicted RBP22.8■■□□□ 1.24
PMPCA-212ENST00000622209 SAAL1Q96ER3 474 aa22.8■■□□□ 1.24
PMPCA-212ENST00000622209 GBP4Q96PP9 640 aa22.8■■□□□ 1.24
PMPCA-212ENST00000622209 KXD1Q9BQD3 176 aa22.8■■□□□ 1.24
PMPCA-212ENST00000622209 GTPBP4Q9BZE4 634 aaKnown RBP22.8■■□□□ 1.24
PMPCA-212ENST00000622209 HSPBP1Q9NZL4 362 aa22.8■■□□□ 1.24
PMPCA-212ENST00000622209 MRPS23Q9Y3D9 190 aaKnown RBP22.8■■□□□ 1.24
PMPCA-212ENST00000622209 SIT1Q9Y3P8 196 aa22.8■■□□□ 1.24
PMPCA-212ENST00000622209 C2CD2Q9Y426 696 aa22.8■■□□□ 1.24
PMPCA-212ENST00000622209 TRIP11Q15643 1979 aa22.8■■□□□ 1.24
PMPCA-212ENST00000622209 PRRG1O14668 218 aa22.79■■□□□ 1.24
PMPCA-212ENST00000622209 SPAG1Q07617 926 aa22.79■■□□□ 1.24
PMPCA-212ENST00000622209 JADE1Q6IE81 842 aa22.79■■□□□ 1.24
PMPCA-212ENST00000622209 RTL10Q7L3V2 364 aa22.79■■□□□ 1.24
PMPCA-212ENST00000622209 NT5DC4Q86YG4 428 aa22.79■■□□□ 1.24
PMPCA-212ENST00000622209 BRSK2Q8IWQ3 736 aa22.79■■□□□ 1.24
PMPCA-212ENST00000622209 NPAS3Q8IXF0 933 aa22.79■■□□□ 1.24
PMPCA-212ENST00000622209 TMEM130Q8N3G9 435 aa22.79■■□□□ 1.24
PMPCA-212ENST00000622209 ZSWIM2Q8NEG5 633 aa22.79■■□□□ 1.24
PMPCA-212ENST00000622209 TMEM174Q8WUU8 243 aa22.79■■□□□ 1.24
PMPCA-212ENST00000622209 SMARCE1Q969G3 411 aa22.79■■□□□ 1.24
PMPCA-212ENST00000622209 MCRS1Q96EZ8 462 aa22.79■■□□□ 1.24
PMPCA-212ENST00000622209 FOXQ1Q9C009 403 aa22.79■■□□□ 1.24
PMPCA-212ENST00000622209 RBAKQ9NYW8 714 aaPredicted RBP22.79■■□□□ 1.24
PMPCA-212ENST00000622209 PCDHA5Q9Y5H7 936 aa22.79■■□□□ 1.24
PMPCA-212ENST00000622209 WDR27A2RRH5 827 aa22.78■■□□□ 1.24
PMPCA-212ENST00000622209 GOLGA8IPA6NC78 632 aa22.78■■□□□ 1.24
PMPCA-212ENST00000622209 ZNF233A6NK53 670 aa22.78■■□□□ 1.24
PMPCA-212ENST00000622209 GOLGA8JA6NMD2 632 aa22.78■■□□□ 1.24
PMPCA-212ENST00000622209 H7C4K7 107 aa22.78■■□□□ 1.24
PMPCA-212ENST00000622209 PDXKO00764 312 aa22.78■■□□□ 1.24
PMPCA-212ENST00000622209 SYN3O14994 580 aa22.78■■□□□ 1.24
PMPCA-212ENST00000622209 ABLIM3O94929 683 aa22.78■■□□□ 1.24
PMPCA-212ENST00000622209 LRG1P02750 347 aa22.78■■□□□ 1.24
PMPCA-212ENST00000622209 RHOP08100 348 aa22.78■■□□□ 1.24
PMPCA-212ENST00000622209 LRPAP1P30533 357 aa22.78■■□□□ 1.24
PMPCA-212ENST00000622209 TMEM132DQ14C87 1099 aa22.78■■□□□ 1.24
PMPCA-212ENST00000622209 SPATA1Q5VX52 437 aa22.78■■□□□ 1.24
PMPCA-212ENST00000622209 GUF1Q8N442 669 aaKnown RBP22.78■■□□□ 1.24
PMPCA-212ENST00000622209 XXYLT1Q8NBI6 393 aa22.78■■□□□ 1.24
PMPCA-212ENST00000622209 BEST2Q8NFU1 509 aa22.78■■□□□ 1.24
PMPCA-212ENST00000622209 KCTD10Q9H3F6 313 aa22.78■■□□□ 1.24
PMPCA-212ENST00000622209 CYP4F11Q9HBI6 524 aa22.78■■□□□ 1.24
PMPCA-212ENST00000622209 TUBGCP4Q9UGJ1 667 aa22.78■■□□□ 1.24
PMPCA-212ENST00000622209 FBXL5Q9UKA1 691 aa22.78■■□□□ 1.24
PMPCA-212ENST00000622209 WDR87Q6ZQQ6 2873 aa22.77■■□□□ 1.24
PMPCA-212ENST00000622209 MTCL1Q9Y4B5 1905 aaKnown RBP22.77■■□□□ 1.24
PMPCA-212ENST00000622209 CLIC2O15247 247 aa22.77■■□□□ 1.24
PMPCA-212ENST00000622209 TBC1D4O60343 1298 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms