RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 CAV1Q03135 178 aa16.67■□□□□ 0.26
NPHP4-211ENST00000622020 ALCAMQ13740 583 aa16.67■□□□□ 0.26
NPHP4-211ENST00000622020 PLEKHG4Q58EX7 1191 aa16.67■□□□□ 0.26
NPHP4-211ENST00000622020 OTOAQ7RTW8 1153 aa16.67■□□□□ 0.26
NPHP4-211ENST00000622020 ZNF341Q9BYN7 854 aa16.67■□□□□ 0.26
NPHP4-211ENST00000622020 TMOD2Q9NZR1 351 aa16.67■□□□□ 0.26
NPHP4-211ENST00000622020 ANKFY1Q9P2R3 1169 aa16.67■□□□□ 0.26
NPHP4-211ENST00000622020 GABBR1Q9UBS5 961 aa16.67■□□□□ 0.26
NPHP4-211ENST00000622020 CFAP69A5D8W1 941 aa16.66■□□□□ 0.26
NPHP4-211ENST00000622020 NEFHP12036 1026 aa16.66■□□□□ 0.26
NPHP4-211ENST00000622020 MUTP22033 750 aa16.66■□□□□ 0.26
NPHP4-211ENST00000622020 NLRP11P59045 1033 aaKnown RBP16.66■□□□□ 0.26
NPHP4-211ENST00000622020 TFDP1Q14186 410 aa16.66■□□□□ 0.26
NPHP4-211ENST00000622020 MAPK6Q16659 721 aa16.66■□□□□ 0.26
NPHP4-211ENST00000622020 KCNT1Q5JUK3 1230 aa16.66■□□□□ 0.26
NPHP4-211ENST00000622020 APBB1IPQ7Z5R6 666 aaPredicted RBP16.66■□□□□ 0.26
NPHP4-211ENST00000622020 MAP4K3Q8IVH8 894 aa16.66■□□□□ 0.26
NPHP4-211ENST00000622020 GPD1LQ8N335 351 aa16.66■□□□□ 0.26
NPHP4-211ENST00000622020 SLC7A6OSQ96CW6 309 aaPredicted RBP16.66■□□□□ 0.26
NPHP4-211ENST00000622020 COQ4Q9Y3A0 265 aa16.66■□□□□ 0.26
NPHP4-211ENST00000622020 ATRNL1Q5VV63 1379 aa16.66■□□□□ 0.26
NPHP4-211ENST00000622020 LRRD1A4D1F6 860 aa16.66■□□□□ 0.26
NPHP4-211ENST00000622020 PEX11AO75192 247 aa16.66■□□□□ 0.26
NPHP4-211ENST00000622020 LIN9Q5TKA1 542 aa16.66■□□□□ 0.26
NPHP4-211ENST00000622020 MON1BQ7L1V2 547 aa16.66■□□□□ 0.26
NPHP4-211ENST00000622020 ZCCHC9Q8N567 271 aaKnown RBP16.66■□□□□ 0.26
NPHP4-211ENST00000622020 DENND2DQ9H6A0 471 aaPredicted RBP16.66■□□□□ 0.26
NPHP4-211ENST00000622020 ZFP69BQ9UJL9 534 aa16.66■□□□□ 0.26
NPHP4-211ENST00000622020 EME2A4GXA9 379 aaPredicted RBP16.65■□□□□ 0.26
NPHP4-211ENST00000622020 ALDH3A1P30838 453 aa16.65■□□□□ 0.26
NPHP4-211ENST00000622020 SLC1A1P43005 524 aa16.65■□□□□ 0.26
NPHP4-211ENST00000622020 PSMC5P62195 406 aa16.65■□□□□ 0.26
NPHP4-211ENST00000622020 CENPCQ03188 943 aa16.65■□□□□ 0.26
NPHP4-211ENST00000622020 TDRD10Q5VZ19 366 aaKnown RBP16.65■□□□□ 0.26
NPHP4-211ENST00000622020 SYDE1Q6ZW31 735 aaPredicted RBP16.65■□□□□ 0.26
NPHP4-211ENST00000622020 RFWD2Q8NHY2 731 aa16.65■□□□□ 0.26
NPHP4-211ENST00000622020 PRR11Q96HE9 360 aaPredicted RBP16.65■□□□□ 0.26
NPHP4-211ENST00000622020 MCEEQ96PE7 176 aa16.65■□□□□ 0.26
NPHP4-211ENST00000622020 IWS1Q96ST2 819 aa16.65■□□□□ 0.26
NPHP4-211ENST00000622020 EURLQ9NYK6 297 aa16.65■□□□□ 0.26
NPHP4-211ENST00000622020 ZNF536O15090 1300 aa16.65■□□□□ 0.26
NPHP4-211ENST00000622020 LIASO43766 372 aa16.65■□□□□ 0.26
NPHP4-211ENST00000622020 CAP2P40123 477 aa16.65■□□□□ 0.26
NPHP4-211ENST00000622020 MOGSQ13724 837 aa16.65■□□□□ 0.26
NPHP4-211ENST00000622020 NLRP9Q7RTR0 991 aa16.65■□□□□ 0.26
NPHP4-211ENST00000622020 DTX3LQ8TDB6 740 aa16.65■□□□□ 0.26
NPHP4-211ENST00000622020 RMDN3Q96TC7 470 aa16.65■□□□□ 0.26
NPHP4-211ENST00000622020 RNPEPL1Q9HAU8 725 aa16.65■□□□□ 0.26
NPHP4-211ENST00000622020 APOBEC3GQ9HC16 384 aaKnown RBP16.65■□□□□ 0.26
NPHP4-211ENST00000622020 ZNFX1Q9P2E3 1918 aaKnown RBP16.65■□□□□ 0.26
NPHP4-211ENST00000622020 EDF1O60869 148 aaKnown RBP16.64■□□□□ 0.26
NPHP4-211ENST00000622020 SMNDC1O75940 238 aaKnown RBP eCLIP16.64■□□□□ 0.26
NPHP4-211ENST00000622020 YY1P25490 414 aa16.64■□□□□ 0.26
NPHP4-211ENST00000622020 TRAF1Q13077 416 aa16.64■□□□□ 0.26
NPHP4-211ENST00000622020 CYP4A22Q5TCH4 519 aa16.64■□□□□ 0.26
NPHP4-211ENST00000622020 SWSAP1Q6NVH7 229 aa16.64■□□□□ 0.26
NPHP4-211ENST00000622020 NLRX1Q86UT6 975 aa16.64■□□□□ 0.26
NPHP4-211ENST00000622020 CCDC125Q86Z20 511 aa16.64■□□□□ 0.26
NPHP4-211ENST00000622020 SYTL5Q8TDW5 730 aaPredicted RBP16.64■□□□□ 0.26
NPHP4-211ENST00000622020 ZNF75CPQ92670 426 aaPredicted RBP16.64■□□□□ 0.26
NPHP4-211ENST00000622020 MFSD14AQ96MC6 490 aa16.64■□□□□ 0.26
NPHP4-211ENST00000622020 SLC17A7Q9P2U7 560 aa16.64■□□□□ 0.26
NPHP4-211ENST00000622020 SEPT9Q9UHD8 586 aaPredicted RBP16.64■□□□□ 0.26
NPHP4-211ENST00000622020 STARD13Q9Y3M8 1113 aa16.64■□□□□ 0.26
NPHP4-211ENST00000622020 KAT6AQ92794 2004 aa16.64■□□□□ 0.25
NPHP4-211ENST00000622020 SCN9AQ15858 1988 aa16.64■□□□□ 0.25
NPHP4-211ENST00000622020 DNALI1O14645 258 aaPredicted RBP16.64■□□□□ 0.25
NPHP4-211ENST00000622020 ENTPD3O75355 529 aa16.64■□□□□ 0.25
NPHP4-211ENST00000622020 TCEA3O75764 348 aa16.64■□□□□ 0.25
NPHP4-211ENST00000622020 CALB2P22676 271 aa16.64■□□□□ 0.25
NPHP4-211ENST00000622020 LIG4P49917 911 aa16.64■□□□□ 0.25
NPHP4-211ENST00000622020 TUBP50607 506 aa16.64■□□□□ 0.25
NPHP4-211ENST00000622020 MEX3CQ5U5Q3 659 aaKnown RBP16.64■□□□□ 0.25
NPHP4-211ENST00000622020 DCUN1D2Q6PH85 259 aa16.64■□□□□ 0.25
NPHP4-211ENST00000622020 LRRC6Q86X45 466 aa16.64■□□□□ 0.25
NPHP4-211ENST00000622020 DENND1AQ8TEH3 1009 aa16.64■□□□□ 0.25
NPHP4-211ENST00000622020 CLEC4DQ8WXI8 215 aa16.64■□□□□ 0.25
NPHP4-211ENST00000622020 GRAMD1AQ96CP6 724 aa16.64■□□□□ 0.25
NPHP4-211ENST00000622020 GJD4Q96KN9 370 aaPredicted RBP16.64■□□□□ 0.25
NPHP4-211ENST00000622020 ZWILCHQ9H900 591 aa16.64■□□□□ 0.25
NPHP4-211ENST00000622020 FBXO6Q9NRD1 293 aaPredicted RBP16.64■□□□□ 0.25
NPHP4-211ENST00000622020 YDJCA8MPS7 323 aa16.64■□□□□ 0.25
NPHP4-211ENST00000622020 ZNF862O60290 1169 aa16.64■□□□□ 0.25
NPHP4-211ENST00000622020 TPBGLP0DKB5 382 aa16.64■□□□□ 0.25
NPHP4-211ENST00000622020 MAPTP10636 758 aaKnown RBP16.64■□□□□ 0.25
NPHP4-211ENST00000622020 PTDSS1P48651 473 aaKnown RBP16.64■□□□□ 0.25
NPHP4-211ENST00000622020 YARSP54577 528 aaKnown RBP16.64■□□□□ 0.25
NPHP4-211ENST00000622020 MSS51Q4VC12 460 aa16.64■□□□□ 0.25
NPHP4-211ENST00000622020 ANKRD22Q5VYY1 191 aa16.64■□□□□ 0.25
NPHP4-211ENST00000622020 TMEM143Q96AN5 459 aa16.64■□□□□ 0.25
NPHP4-211ENST00000622020 LRMDAQ9H2I8 198 aa16.64■□□□□ 0.25
NPHP4-211ENST00000622020 BATF3Q9NR55 127 aa16.64■□□□□ 0.25
NPHP4-211ENST00000622020 ZNF831Q5JPB2 1677 aa16.63■□□□□ 0.25
NPHP4-211ENST00000622020 ZBED4O75132 1171 aa16.63■□□□□ 0.25
NPHP4-211ENST00000622020 CPA2P48052 419 aa16.63■□□□□ 0.25
NPHP4-211ENST00000622020 GDF10P55107 478 aa16.63■□□□□ 0.25
NPHP4-211ENST00000622020 NOMO3P69849 1222 aa16.63■□□□□ 0.25
NPHP4-211ENST00000622020 GCNT1Q02742 428 aa16.63■□□□□ 0.25
NPHP4-211ENST00000622020 PDK4Q16654 411 aa16.63■□□□□ 0.25
NPHP4-211ENST00000622020 WDR72Q3MJ13 1102 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms