RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 MICALL1Q8N3F8 863 aa10□□□□□ -0.81
PDPN-212ENST00000621990 CCDC89Q8N998 374 aa10□□□□□ -0.81
PDPN-212ENST00000621990 FGD4Q96M96 766 aa10□□□□□ -0.81
PDPN-212ENST00000621990 GPR20Q99678 358 aa10□□□□□ -0.81
PDPN-212ENST00000621990 NIF3L1Q9GZT8 377 aa10□□□□□ -0.81
PDPN-212ENST00000621990 ZSWIM8A7E2V4 1837 aa10□□□□□ -0.81
PDPN-212ENST00000621990 MGAMO43451 1857 aa10□□□□□ -0.81
PDPN-212ENST00000621990 A0A0G2JLL6 359 aaPredicted RBP10□□□□□ -0.81
PDPN-212ENST00000621990 TLDC2A0PJX2 215 aa10□□□□□ -0.81
PDPN-212ENST00000621990 ASAP2O43150 1006 aa10□□□□□ -0.81
PDPN-212ENST00000621990 PEX10O60683 326 aa10□□□□□ -0.81
PDPN-212ENST00000621990 CNMDO75829 334 aa10□□□□□ -0.81
PDPN-212ENST00000621990 HOXC6P09630 235 aa10□□□□□ -0.81
PDPN-212ENST00000621990 COPS2P61201 443 aa10□□□□□ -0.81
PDPN-212ENST00000621990 TAP1Q03518 808 aa10□□□□□ -0.81
PDPN-212ENST00000621990 NFX1Q12986 1120 aaKnown RBP10□□□□□ -0.81
PDPN-212ENST00000621990 LLGL1Q15334 1064 aa10□□□□□ -0.81
PDPN-212ENST00000621990 DUOXA2Q1HG44 320 aa10□□□□□ -0.81
PDPN-212ENST00000621990 SEZ6Q53EL9 994 aa10□□□□□ -0.81
PDPN-212ENST00000621990 GKAP1Q5VSY0 366 aaPredicted RBP10□□□□□ -0.81
PDPN-212ENST00000621990 TAOK1Q7L7X3 1001 aa10□□□□□ -0.81
PDPN-212ENST00000621990 PRRT2Q7Z6L0 340 aaPredicted RBP10□□□□□ -0.81
PDPN-212ENST00000621990 EXOC3L1Q86VI1 746 aa10□□□□□ -0.81
PDPN-212ENST00000621990 CNPY4Q8N129 248 aa10□□□□□ -0.81
PDPN-212ENST00000621990 P3H4Q92791 437 aa10□□□□□ -0.81
PDPN-212ENST00000621990 KAT2BQ92831 832 aa10□□□□□ -0.81
PDPN-212ENST00000621990 RBM41Q96IZ5 413 aaKnown RBP10□□□□□ -0.81
PDPN-212ENST00000621990 FOXP3Q9BZS1 431 aa10□□□□□ -0.81
PDPN-212ENST00000621990 MTMR12Q9C0I1 747 aa10□□□□□ -0.81
PDPN-212ENST00000621990 C2orf40Q9H1Z8 148 aa10□□□□□ -0.81
PDPN-212ENST00000621990 ANAPC5Q9UJX4 755 aa10□□□□□ -0.81
PDPN-212ENST00000621990 EIF4BP23588 611 aaKnown RBP9.99□□□□□ -0.81
PDPN-212ENST00000621990 ASPAP45381 313 aa9.99□□□□□ -0.81
PDPN-212ENST00000621990 MYL6P60660 151 aa9.99□□□□□ -0.81
PDPN-212ENST00000621990 RPL7AP62424 266 aaKnown RBP9.99□□□□□ -0.81
PDPN-212ENST00000621990 LMNB2Q03252 620 aa9.99□□□□□ -0.81
PDPN-212ENST00000621990 ACTN3Q08043 901 aaPredicted RBP9.99□□□□□ -0.81
PDPN-212ENST00000621990 IFT88Q13099 833 aa9.99□□□□□ -0.81
PDPN-212ENST00000621990 LY6KQ17RY6 165 aa9.99□□□□□ -0.81
PDPN-212ENST00000621990 HIBCHQ6NVY1 386 aaPredicted RBP9.99□□□□□ -0.81
PDPN-212ENST00000621990 PIGWQ7Z7B1 504 aa9.99□□□□□ -0.81
PDPN-212ENST00000621990 CCDC25Q86WR0 208 aa9.99□□□□□ -0.81
PDPN-212ENST00000621990 CCDC50Q8IVM0 306 aa9.99□□□□□ -0.81
PDPN-212ENST00000621990 CACNA2D3Q8IZS8 1091 aa9.99□□□□□ -0.81
PDPN-212ENST00000621990 CCHCR1Q8TD31 782 aa9.99□□□□□ -0.81
PDPN-212ENST00000621990 FAM212AQ96EL1 285 aa9.99□□□□□ -0.81
PDPN-212ENST00000621990 FAXDC2Q96IV6 333 aa9.99□□□□□ -0.81
PDPN-212ENST00000621990 SCLT1Q96NL6 688 aa9.99□□□□□ -0.81
PDPN-212ENST00000621990 SLITRK1Q96PX8 696 aa9.99□□□□□ -0.81
PDPN-212ENST00000621990 HEMGNQ9BXL5 484 aa9.99□□□□□ -0.81
PDPN-212ENST00000621990 XYLT2Q9H1B5 865 aa9.99□□□□□ -0.81
PDPN-212ENST00000621990 CISHQ9NSE2 258 aa9.99□□□□□ -0.81
PDPN-212ENST00000621990 LGALS13Q9UHV8 139 aa9.99□□□□□ -0.81
PDPN-212ENST00000621990 LIASO43766 372 aa9.99□□□□□ -0.81
PDPN-212ENST00000621990 B4GALT4O60513 344 aa9.99□□□□□ -0.81
PDPN-212ENST00000621990 ARIH2O95376 493 aa9.99□□□□□ -0.81
PDPN-212ENST00000621990 PRKCBP05771 671 aa9.99□□□□□ -0.81
PDPN-212ENST00000621990 CD58P19256 250 aa9.99□□□□□ -0.81
PDPN-212ENST00000621990 ADCY8P40145 1251 aa9.99□□□□□ -0.81
PDPN-212ENST00000621990 SLCO1A2P46721 670 aa9.99□□□□□ -0.81
PDPN-212ENST00000621990 CNGA2Q16280 664 aa9.99□□□□□ -0.81
PDPN-212ENST00000621990 MAPK6Q16659 721 aa9.99□□□□□ -0.81
PDPN-212ENST00000621990 CCDC142Q17RM4 750 aa9.99□□□□□ -0.81
PDPN-212ENST00000621990 LACTB2Q53H82 288 aaPredicted RBP9.99□□□□□ -0.81
PDPN-212ENST00000621990 CELF3Q5SZQ8 465 aaKnown RBP9.99□□□□□ -0.81
PDPN-212ENST00000621990 ZBTB8OSQ8IWT0 167 aa9.99□□□□□ -0.81
PDPN-212ENST00000621990 WDTC1Q8N5D0 677 aa9.99□□□□□ -0.81
PDPN-212ENST00000621990 TMEM35BQ8NCS4 154 aa9.99□□□□□ -0.81
PDPN-212ENST00000621990 IPO4Q8TEX9 1081 aaKnown RBP9.99□□□□□ -0.81
PDPN-212ENST00000621990 CCDC114Q96M63 670 aa9.99□□□□□ -0.81
PDPN-212ENST00000621990 JPH2Q9BR39 696 aaPredicted RBP9.99□□□□□ -0.81
PDPN-212ENST00000621990 OSBPL7Q9BZF2 842 aa9.99□□□□□ -0.81
PDPN-212ENST00000621990 FZD8Q9H461 694 aa9.99□□□□□ -0.81
PDPN-212ENST00000621990 NINJ2Q9NZG7 142 aa9.99□□□□□ -0.81
PDPN-212ENST00000621990 PPP1R1BQ9UD71 204 aaPredicted RBP9.99□□□□□ -0.81
PDPN-212ENST00000621990 DNAJC25-GNG10A0A024R161 153 aa9.98□□□□□ -0.81
PDPN-212ENST00000621990 SMIM23A6NLE4 172 aa9.98□□□□□ -0.81
PDPN-212ENST00000621990 ACSL3O95573 720 aa9.98□□□□□ -0.81
PDPN-212ENST00000621990 SLC25A27O95847 323 aa9.98□□□□□ -0.81
PDPN-212ENST00000621990 ABHD2P08910 425 aa9.98□□□□□ -0.81
PDPN-212ENST00000621990 ATP5DP30049 168 aa9.98□□□□□ -0.81
PDPN-212ENST00000621990 SLC26A2P50443 739 aa9.98□□□□□ -0.81
PDPN-212ENST00000621990 LONRF1Q17RB8 773 aa9.98□□□□□ -0.81
PDPN-212ENST00000621990 MPZL3Q6UWV2 235 aa9.98□□□□□ -0.81
PDPN-212ENST00000621990 CEP128Q6ZU80 1094 aa9.98□□□□□ -0.81
PDPN-212ENST00000621990 ZNF365Q70YC5 407 aa9.98□□□□□ -0.81
PDPN-212ENST00000621990 CPLX4Q7Z7G2 160 aa9.98□□□□□ -0.81
PDPN-212ENST00000621990 NCAPG2Q86XI2 1143 aa9.98□□□□□ -0.81
PDPN-212ENST00000621990 ZCCHC9Q8N567 271 aaKnown RBP9.98□□□□□ -0.81
PDPN-212ENST00000621990 UHMK1Q8TAS1 419 aaKnown RBP9.98□□□□□ -0.81
PDPN-212ENST00000621990 CNKSR2Q8WXI2 1034 aa9.98□□□□□ -0.81
PDPN-212ENST00000621990 CABS1Q96KC9 395 aa9.98□□□□□ -0.81
PDPN-212ENST00000621990 SELENOSQ9BQE4 189 aa9.98□□□□□ -0.81
PDPN-212ENST00000621990 ACTR5Q9H9F9 607 aaPredicted RBP9.98□□□□□ -0.81
PDPN-212ENST00000621990 INTS9Q9NV88 658 aaKnown RBP9.98□□□□□ -0.81
PDPN-212ENST00000621990 EURLQ9NYK6 297 aa9.98□□□□□ -0.81
PDPN-212ENST00000621990 SBF1O95248 1867 aa9.98□□□□□ -0.81
PDPN-212ENST00000621990 ACKR2O00590 384 aa9.98□□□□□ -0.81
PDPN-212ENST00000621990 TJP3O95049 919 aa9.98□□□□□ -0.81
PDPN-212ENST00000621990 GJB6O95452 261 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms