RNA–Protein interactions for RNA: ENST00000621715.4

TARDBP-225, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-225ENST00000621715 ARSHQ5FYA8 562 aa18.23■□□□□ 0.51
TARDBP-225ENST00000621715 PRR23BQ6ZRT6 265 aa18.23■□□□□ 0.51
TARDBP-225ENST00000621715 ARID3BQ8IVW6 561 aaPredicted RBP18.23■□□□□ 0.51
TARDBP-225ENST00000621715 SECISBP2LQ93073 1101 aaKnown RBP18.23■□□□□ 0.51
TARDBP-225ENST00000621715 KIF12Q96FN5 646 aa18.23■□□□□ 0.51
TARDBP-225ENST00000621715 SLITRK6Q9H5Y7 841 aa18.23■□□□□ 0.51
TARDBP-225ENST00000621715 C17orf75Q9HAS0 396 aa18.23■□□□□ 0.51
TARDBP-225ENST00000621715 GTSE1Q9NYZ3 720 aa18.23■□□□□ 0.51
TARDBP-225ENST00000621715 DAXXQ9UER7 740 aaPredicted RBP18.23■□□□□ 0.51
TARDBP-225ENST00000621715 MTMR11A4FU01 709 aa18.22■□□□□ 0.51
TARDBP-225ENST00000621715 PRR5-ARHGAP8B1AHC4 643 aa18.22■□□□□ 0.51
TARDBP-225ENST00000621715 GDF9O60383 454 aa18.22■□□□□ 0.51
TARDBP-225ENST00000621715 PRAMEF12O95522 483 aa18.22■□□□□ 0.51
TARDBP-225ENST00000621715 CXCL12P48061 93 aa18.22■□□□□ 0.51
TARDBP-225ENST00000621715 ARHGAP8P85298 464 aa18.22■□□□□ 0.51
TARDBP-225ENST00000621715 STRN3Q13033 797 aa18.22■□□□□ 0.51
TARDBP-225ENST00000621715 GNL2Q13823 731 aaKnown RBP18.22■□□□□ 0.51
TARDBP-225ENST00000621715 HYIQ5T013 277 aa18.22■□□□□ 0.51
TARDBP-225ENST00000621715 LAIR1Q6GTX8 287 aa18.22■□□□□ 0.51
TARDBP-225ENST00000621715 CENPPQ6IPU0 288 aa18.22■□□□□ 0.51
TARDBP-225ENST00000621715 ZPBP2Q6X784 338 aa18.22■□□□□ 0.51
TARDBP-225ENST00000621715 CELF5Q8N6W0 485 aaKnown RBP18.22■□□□□ 0.51
TARDBP-225ENST00000621715 SYT2Q8N9I0 419 aaPredicted RBP18.22■□□□□ 0.51
TARDBP-225ENST00000621715 OR10T2Q8NGX3 314 aa18.22■□□□□ 0.51
TARDBP-225ENST00000621715 GMEB2Q9UKD1 530 aa18.22■□□□□ 0.51
TARDBP-225ENST00000621715 MAFFQ9ULX9 164 aa18.22■□□□□ 0.51
TARDBP-225ENST00000621715 DENND4CQ5VZ89 1909 aa18.21■□□□□ 0.51
TARDBP-225ENST00000621715 EML5Q05BV3 1969 aa18.21■□□□□ 0.51
TARDBP-225ENST00000621715 CHADO15335 359 aa18.21■□□□□ 0.51
TARDBP-225ENST00000621715 CLDN3O15551 220 aa18.21■□□□□ 0.51
TARDBP-225ENST00000621715 MARCKSP29966 332 aaPredicted RBP18.21■□□□□ 0.51
TARDBP-225ENST00000621715 CTHP32929 405 aa18.21■□□□□ 0.51
TARDBP-225ENST00000621715 PRPHP41219 470 aa18.21■□□□□ 0.51
TARDBP-225ENST00000621715 TNK2Q07912 1038 aa18.21■□□□□ 0.51
TARDBP-225ENST00000621715 GPR17Q13304 367 aa18.21■□□□□ 0.51
TARDBP-225ENST00000621715 HEATR6Q6AI08 1181 aaKnown RBP18.21■□□□□ 0.51
TARDBP-225ENST00000621715 SLC39A4Q6P5W5 647 aa18.21■□□□□ 0.51
TARDBP-225ENST00000621715 PKN3Q6P5Z2 889 aa18.21■□□□□ 0.51
TARDBP-225ENST00000621715 DTHD1Q6ZMT9 781 aa18.21■□□□□ 0.51
TARDBP-225ENST00000621715 DNAJB7Q7Z6W7 309 aaPredicted RBP18.21■□□□□ 0.51
TARDBP-225ENST00000621715 LEMD2Q8NC56 503 aa18.21■□□□□ 0.51
TARDBP-225ENST00000621715 LPIN3Q9BQK8 851 aa18.21■□□□□ 0.51
TARDBP-225ENST00000621715 RTKNQ9BST9 563 aa18.21■□□□□ 0.51
TARDBP-225ENST00000621715 IER2Q9BTL4 223 aa18.21■□□□□ 0.51
TARDBP-225ENST00000621715 SMG9Q9H0W8 520 aaKnown RBP18.21■□□□□ 0.51
TARDBP-225ENST00000621715 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.2■□□□□ 0.5
TARDBP-225ENST00000621715 MYBPHLA2RUH7 354 aa18.2■□□□□ 0.5
TARDBP-225ENST00000621715 SPECC1L-ADORA2AF8WAN1 911 aa18.2■□□□□ 0.5
TARDBP-225ENST00000621715 CLTAP09496 248 aa18.2■□□□□ 0.5
TARDBP-225ENST00000621715 NRLP54845 237 aa18.2■□□□□ 0.5
TARDBP-225ENST00000621715 NCKAP1LP55160 1127 aa18.2■□□□□ 0.5
TARDBP-225ENST00000621715 HMGN5P82970 282 aaKnown RBP18.2■□□□□ 0.5
TARDBP-225ENST00000621715 SIM2Q14190 667 aaPredicted RBP18.2■□□□□ 0.5
TARDBP-225ENST00000621715 SPEM1Q8N4L4 309 aa18.2■□□□□ 0.5
TARDBP-225ENST00000621715 FAM184AQ8NB25 1140 aa18.2■□□□□ 0.5
TARDBP-225ENST00000621715 CHFRQ96EP1 664 aa18.2■□□□□ 0.5
TARDBP-225ENST00000621715 RAB34Q9BZG1 259 aa18.2■□□□□ 0.5
TARDBP-225ENST00000621715 PLEKHA5Q9HAU0 1116 aa18.2■□□□□ 0.5
TARDBP-225ENST00000621715 SEMA4GQ9NTN9 838 aa18.2■□□□□ 0.5
TARDBP-225ENST00000621715 SPAG17Q6Q759 2223 aa18.2■□□□□ 0.5
TARDBP-225ENST00000621715 OBSL1O75147 1896 aa18.2■□□□□ 0.5
TARDBP-225ENST00000621715 ADRB2P07550 413 aa18.19■□□□□ 0.5
TARDBP-225ENST00000621715 RETP07949 1114 aa18.19■□□□□ 0.5
TARDBP-225ENST00000621715 NFICP08651 508 aa18.19■□□□□ 0.5
TARDBP-225ENST00000621715 PLA2G4BP0C869 781 aa18.19■□□□□ 0.5
TARDBP-225ENST00000621715 ATF6P18850 670 aa18.19■□□□□ 0.5
TARDBP-225ENST00000621715 KPNA1P52294 538 aaPredicted RBP18.19■□□□□ 0.5
TARDBP-225ENST00000621715 MLLT6P55198 1093 aaPredicted RBP18.19■□□□□ 0.5
TARDBP-225ENST00000621715 LILRA4P59901 499 aa18.19■□□□□ 0.5
TARDBP-225ENST00000621715 CYP4F8P98187 520 aa18.19■□□□□ 0.5
TARDBP-225ENST00000621715 ATP2C1P98194 919 aaPredicted RBP18.19■□□□□ 0.5
TARDBP-225ENST00000621715 PON2Q15165 354 aa18.19■□□□□ 0.5
TARDBP-225ENST00000621715 TMEM119Q4V9L6 283 aa18.19■□□□□ 0.5
TARDBP-225ENST00000621715 OVOS1Q6IE37 1185 aa18.19■□□□□ 0.5
TARDBP-225ENST00000621715 PSMG2Q969U7 264 aa18.19■□□□□ 0.5
TARDBP-225ENST00000621715 TIPINQ9BVW5 301 aa18.19■□□□□ 0.5
TARDBP-225ENST00000621715 IKZF4Q9H2S9 585 aa18.19■□□□□ 0.5
TARDBP-225ENST00000621715 IL21Q9HBE4 155 aa18.19■□□□□ 0.5
TARDBP-225ENST00000621715 POLR3BQ9NW08 1133 aaPredicted RBP18.19■□□□□ 0.5
TARDBP-225ENST00000621715 UBQLN1Q9UMX0 589 aaKnown RBP18.19■□□□□ 0.5
TARDBP-225ENST00000621715 STK24Q9Y6E0 443 aa18.19■□□□□ 0.5
TARDBP-225ENST00000621715 GREB1Q4ZG55 1949 aa18.18■□□□□ 0.5
TARDBP-225ENST00000621715 OTOL1A6NHN0 477 aaPredicted RBP18.18■□□□□ 0.5
TARDBP-225ENST00000621715 OR6C75A6NL08 312 aa18.18■□□□□ 0.5
TARDBP-225ENST00000621715 TISP43B9A030 160 aa18.18■□□□□ 0.5
TARDBP-225ENST00000621715 LAD1O00515 517 aa18.18■□□□□ 0.5
TARDBP-225ENST00000621715 SLC30A4O14863 429 aa18.18■□□□□ 0.5
TARDBP-225ENST00000621715 PAPSS2O95340 614 aaPredicted RBP18.18■□□□□ 0.5
TARDBP-225ENST00000621715 ADRB1P08588 477 aa18.18■□□□□ 0.5
TARDBP-225ENST00000621715 CYP3A5P20815 502 aa18.18■□□□□ 0.5
TARDBP-225ENST00000621715 SDHBP21912 280 aa18.18■□□□□ 0.5
TARDBP-225ENST00000621715 GABRR2P28476 465 aa18.18■□□□□ 0.5
TARDBP-225ENST00000621715 MATR3P43243 847 aaKnown RBP eCLIP18.18■□□□□ 0.5
TARDBP-225ENST00000621715 EPHB3P54753 998 aa18.18■□□□□ 0.5
TARDBP-225ENST00000621715 CCINQ13939 588 aa18.18■□□□□ 0.5
TARDBP-225ENST00000621715 GPR158Q5T848 1215 aa18.18■□□□□ 0.5
TARDBP-225ENST00000621715 JADE1Q6IE81 842 aa18.18■□□□□ 0.5
TARDBP-225ENST00000621715 DSTYKQ6XUX3 929 aa18.18■□□□□ 0.5
TARDBP-225ENST00000621715 PRR23CQ6ZRP0 262 aa18.18■□□□□ 0.5
TARDBP-225ENST00000621715 HAUS6Q7Z4H7 955 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms