RNA–Protein interactions for RNA: ENST00000621016.4

CDH1-214, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-214ENST00000621016 IFNB1P01574 187 aa11.32□□□□□ -0.6
CDH1-214ENST00000621016 LACTBP83111 547 aaPredicted RBP11.32□□□□□ -0.6
CDH1-214ENST00000621016 KIF22Q14807 665 aa11.32□□□□□ -0.6
CDH1-214ENST00000621016 PABPC1LQ4VXU2 614 aaKnown RBP11.32□□□□□ -0.6
CDH1-214ENST00000621016 RSBN1LQ6PCB5 846 aaPredicted RBP11.32□□□□□ -0.6
CDH1-214ENST00000621016 CRELD2Q6UXH1 353 aaPredicted RBP11.32□□□□□ -0.6
CDH1-214ENST00000621016 SLC15A3Q8IY34 581 aa11.32□□□□□ -0.6
CDH1-214ENST00000621016 FAM151AQ8WW52 585 aa11.32□□□□□ -0.6
CDH1-214ENST00000621016 C10orf88Q9H8K7 445 aa11.32□□□□□ -0.6
CDH1-214ENST00000621016 AGO4Q9HCK5 861 aaKnown RBP11.32□□□□□ -0.6
CDH1-214ENST00000621016 RAB20Q9NX57 234 aa11.32□□□□□ -0.6
CDH1-214ENST00000621016 GRHL1Q9NZI5 618 aa11.32□□□□□ -0.6
CDH1-214ENST00000621016 TBX20Q9UMR3 447 aa11.32□□□□□ -0.6
CDH1-214ENST00000621016 IVNS1ABPQ9Y6Y0 642 aa11.32□□□□□ -0.6
CDH1-214ENST00000621016 WNK3Q9BYP7 1800 aa11.32□□□□□ -0.6
CDH1-214ENST00000621016 A6NNZ2 444 aa11.32□□□□□ -0.6
CDH1-214ENST00000621016 DHX15O43143 795 aaKnown RBP11.32□□□□□ -0.6
CDH1-214ENST00000621016 THAP12O43422 761 aa11.32□□□□□ -0.6
CDH1-214ENST00000621016 GH1P01241 217 aa11.32□□□□□ -0.6
CDH1-214ENST00000621016 KRT10P13645 584 aa11.32□□□□□ -0.6
CDH1-214ENST00000621016 GALK1P51570 392 aa11.32□□□□□ -0.6
CDH1-214ENST00000621016 OSTNP61366 133 aa11.32□□□□□ -0.6
CDH1-214ENST00000621016 TUBB8Q3ZCM7 444 aa11.32□□□□□ -0.6
CDH1-214ENST00000621016 SLC44A4Q53GD3 710 aa11.32□□□□□ -0.6
CDH1-214ENST00000621016 DUS1LQ6P1R4 473 aaKnown RBP11.32□□□□□ -0.6
CDH1-214ENST00000621016 TMEM270Q6UE05 265 aa11.32□□□□□ -0.6
CDH1-214ENST00000621016 ANO5Q75V66 913 aa11.32□□□□□ -0.6
CDH1-214ENST00000621016 CDR2LQ86X02 465 aaPredicted RBP11.32□□□□□ -0.6
CDH1-214ENST00000621016 SRRM1Q8IYB3 904 aaKnown RBP11.32□□□□□ -0.6
CDH1-214ENST00000621016 FBXL13Q8NEE6 735 aa11.32□□□□□ -0.6
CDH1-214ENST00000621016 HERPUD2Q9BSE4 406 aa11.32□□□□□ -0.6
CDH1-214ENST00000621016 FGFR1OP2Q9NVK5 253 aa11.32□□□□□ -0.6
CDH1-214ENST00000621016 R3HDM2Q9Y2K5 976 aaKnown RBP11.32□□□□□ -0.6
CDH1-214ENST00000621016 SPO11Q9Y5K1 396 aa11.32□□□□□ -0.6
CDH1-214ENST00000621016 N6AMT1Q9Y5N5 214 aa11.32□□□□□ -0.6
CDH1-214ENST00000621016 CES2O00748 559 aa11.31□□□□□ -0.6
CDH1-214ENST00000621016 HOXA7P31268 230 aaPredicted RBP11.31□□□□□ -0.6
CDH1-214ENST00000621016 CHRNA3P32297 505 aa11.31□□□□□ -0.6
CDH1-214ENST00000621016 PSMD7P51665 324 aa11.31□□□□□ -0.6
CDH1-214ENST00000621016 MRPS35P82673 323 aaKnown RBP11.31□□□□□ -0.6
CDH1-214ENST00000621016 SAMD7Q7Z3H4 446 aa11.31□□□□□ -0.6
CDH1-214ENST00000621016 MORC4Q8TE76 937 aa11.31□□□□□ -0.6
CDH1-214ENST00000621016 FBF1Q8TES7 1133 aa11.31□□□□□ -0.6
CDH1-214ENST00000621016 ARHGEF2Q92974 986 aaKnown RBP11.31□□□□□ -0.6
CDH1-214ENST00000621016 ATG4CQ96DT6 458 aa11.31□□□□□ -0.6
CDH1-214ENST00000621016 EPB41L4BQ9H329 900 aa11.31□□□□□ -0.6
CDH1-214ENST00000621016 SAMD15Q9P1V8 674 aa11.31□□□□□ -0.6
CDH1-214ENST00000621016 NENFQ9UMX5 172 aa11.31□□□□□ -0.6
CDH1-214ENST00000621016 ASB3Q9Y575 518 aa11.31□□□□□ -0.6
CDH1-214ENST00000621016 SLC4A7Q9Y6M7 1214 aa11.31□□□□□ -0.6
CDH1-214ENST00000621016 PASKQ96RG2 1323 aa11.31□□□□□ -0.6
CDH1-214ENST00000621016 TCP11X1B4DZS4 312 aa11.31□□□□□ -0.6
CDH1-214ENST00000621016 ASNSP08243 561 aa11.31□□□□□ -0.6
CDH1-214ENST00000621016 RALAP11233 206 aa11.31□□□□□ -0.6
CDH1-214ENST00000621016 HOXD12P35452 270 aa11.31□□□□□ -0.6
CDH1-214ENST00000621016 CCR3P51677 355 aa11.31□□□□□ -0.6
CDH1-214ENST00000621016 DYNLT1P63172 113 aa11.31□□□□□ -0.6
CDH1-214ENST00000621016 EN1Q05925 392 aaPredicted RBP11.31□□□□□ -0.6
CDH1-214ENST00000621016 EXOC3L1Q86VI1 746 aa11.31□□□□□ -0.6
CDH1-214ENST00000621016 CCHCR1Q8TD31 782 aa11.31□□□□□ -0.6
CDH1-214ENST00000621016 NMD3Q96D46 503 aaKnown RBP11.31□□□□□ -0.6
CDH1-214ENST00000621016 RIT2Q99578 217 aa11.31□□□□□ -0.6
CDH1-214ENST00000621016 VCXQ9H320 206 aa11.31□□□□□ -0.6
CDH1-214ENST00000621016 SCOCQ9UIL1 159 aa11.31□□□□□ -0.6
CDH1-214ENST00000621016 FEM1BQ9UK73 627 aa11.31□□□□□ -0.6
CDH1-214ENST00000621016 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.31□□□□□ -0.6
CDH1-214ENST00000621016 NCANO14594 1321 aa11.31□□□□□ -0.6
CDH1-214ENST00000621016 POC1B-GALNT4F8VUJ3 575 aa11.3□□□□□ -0.6
CDH1-214ENST00000621016 TMCC1O94876 653 aa11.3□□□□□ -0.6
CDH1-214ENST00000621016 NPTXRO95502 500 aa11.3□□□□□ -0.6
CDH1-214ENST00000621016 KCNA3P22001 575 aa11.3□□□□□ -0.6
CDH1-214ENST00000621016 PTGIRP43119 386 aa11.3□□□□□ -0.6
CDH1-214ENST00000621016 LIG4P49917 911 aa11.3□□□□□ -0.6
CDH1-214ENST00000621016 SLMAPQ14BN4 828 aa11.3□□□□□ -0.6
CDH1-214ENST00000621016 ZBTB33Q86T24 672 aa11.3□□□□□ -0.6
CDH1-214ENST00000621016 SYT11Q9BT88 431 aa11.3□□□□□ -0.6
CDH1-214ENST00000621016 CDC42EP4Q9H3Q1 356 aaKnown RBP11.3□□□□□ -0.6
CDH1-214ENST00000621016 NOCTQ9UK39 431 aaKnown RBP11.3□□□□□ -0.6
CDH1-214ENST00000621016 RBMX2Q9Y388 322 aaKnown RBP11.3□□□□□ -0.6
CDH1-214ENST00000621016 ARFGEF1Q9Y6D6 1849 aa11.3□□□□□ -0.6
CDH1-214ENST00000621016 MIF4GDA9UHW6 222 aaKnown RBP11.3□□□□□ -0.6
CDH1-214ENST00000621016 WNT10BO00744 389 aa11.3□□□□□ -0.6
CDH1-214ENST00000621016 SPAG7O75391 227 aa11.3□□□□□ -0.6
CDH1-214ENST00000621016 ICAM1P05362 532 aa11.3□□□□□ -0.6
CDH1-214ENST00000621016 ZSCAN5DPP0CG00 497 aa11.3□□□□□ -0.6
CDH1-214ENST00000621016 NSFP46459 744 aaKnown RBP11.3□□□□□ -0.6
CDH1-214ENST00000621016 PEX5P50542 639 aa11.3□□□□□ -0.6
CDH1-214ENST00000621016 ITGA8P53708 1063 aa11.3□□□□□ -0.6
CDH1-214ENST00000621016 CACNA2D1P54289 1103 aa11.3□□□□□ -0.6
CDH1-214ENST00000621016 SLC15A2Q16348 729 aa11.3□□□□□ -0.6
CDH1-214ENST00000621016 ZBTB41Q5SVQ8 909 aa11.3□□□□□ -0.6
CDH1-214ENST00000621016 TMEM53Q6P2H8 277 aa11.3□□□□□ -0.6
CDH1-214ENST00000621016 MAP7D3Q8IWC1 876 aa11.3□□□□□ -0.6
CDH1-214ENST00000621016 ANKS4BQ8N8V4 417 aa11.3□□□□□ -0.6
CDH1-214ENST00000621016 ZBTB8BQ8NAP8 495 aaPredicted RBP11.3□□□□□ -0.6
CDH1-214ENST00000621016 ABHD8Q96I13 439 aa11.3□□□□□ -0.6
CDH1-214ENST00000621016 OXCT2Q9BYC2 517 aaPredicted RBP11.3□□□□□ -0.6
CDH1-214ENST00000621016 RPAP3Q9H6T3 665 aaPredicted RBP11.3□□□□□ -0.6
CDH1-214ENST00000621016 C1orf112Q9NSG2 853 aa11.3□□□□□ -0.6
CDH1-214ENST00000621016 EFR3BQ9Y2G0 817 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms