RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 MAK16Q9BXY0 300 aaKnown RBP20.7■□□□□ 0.9
PDLIM3-212ENST00000620787 VPS37BQ9H9H4 285 aa20.7■□□□□ 0.9
PDLIM3-212ENST00000620787 NUMBLQ9Y6R0 609 aa20.7■□□□□ 0.9
PDLIM3-212ENST00000620787 C2CD2LO14523 706 aa20.69■□□□□ 0.9
PDLIM3-212ENST00000620787 NFX1Q12986 1120 aaKnown RBP20.69■□□□□ 0.9
PDLIM3-212ENST00000620787 EAPPQ56P03 285 aaPredicted RBP20.69■□□□□ 0.9
PDLIM3-212ENST00000620787 LIN9Q5TKA1 542 aa20.69■□□□□ 0.9
PDLIM3-212ENST00000620787 HHATQ5VTY9 493 aa20.69■□□□□ 0.9
PDLIM3-212ENST00000620787 C15orf39Q6ZRI6 1047 aa20.69■□□□□ 0.9
PDLIM3-212ENST00000620787 USP37Q86T82 979 aa20.69■□□□□ 0.9
PDLIM3-212ENST00000620787 LNPEPQ9UIQ6 1025 aa20.69■□□□□ 0.9
PDLIM3-212ENST00000620787 ZFP69BQ9UJL9 534 aa20.69■□□□□ 0.9
PDLIM3-212ENST00000620787 RPL26L1Q9UNX3 145 aaKnown RBP20.69■□□□□ 0.9
PDLIM3-212ENST00000620787 UBIAD1Q9Y5Z9 338 aa20.69■□□□□ 0.9
PDLIM3-212ENST00000620787 ENTPD5O75356 428 aa20.68■□□□□ 0.9
PDLIM3-212ENST00000620787 KRT10P13645 584 aa20.68■□□□□ 0.9
PDLIM3-212ENST00000620787 PTPN4P29074 926 aa20.68■□□□□ 0.9
PDLIM3-212ENST00000620787 SSR1P43307 286 aaKnown RBP20.68■□□□□ 0.9
PDLIM3-212ENST00000620787 PTDSS1P48651 473 aaKnown RBP20.68■□□□□ 0.9
PDLIM3-212ENST00000620787 ARSEP51690 589 aa20.68■□□□□ 0.9
PDLIM3-212ENST00000620787 CTC1Q2NKJ3 1217 aa20.68■□□□□ 0.9
PDLIM3-212ENST00000620787 XKR9Q5GH70 373 aa20.68■□□□□ 0.9
PDLIM3-212ENST00000620787 DRICH1Q6PGQ1 229 aaPredicted RBP20.68■□□□□ 0.9
PDLIM3-212ENST00000620787 LVRNQ6Q4G3 990 aa20.68■□□□□ 0.9
PDLIM3-212ENST00000620787 ALLCQ8N6M5 410 aa20.68■□□□□ 0.9
PDLIM3-212ENST00000620787 BSNDQ8WZ55 320 aa20.68■□□□□ 0.9
PDLIM3-212ENST00000620787 ZNF516Q92618 1163 aa20.68■□□□□ 0.9
PDLIM3-212ENST00000620787 MYH9P35579 1960 aaKnown RBP20.68■□□□□ 0.9
PDLIM3-212ENST00000620787 PI4K2BG5E9Z4 385 aa20.68■□□□□ 0.9
PDLIM3-212ENST00000620787 H0Y3Z8 333 aa20.68■□□□□ 0.9
PDLIM3-212ENST00000620787 ALOX15BO15296 676 aa20.68■□□□□ 0.9
PDLIM3-212ENST00000620787 NOMO3P69849 1222 aa20.68■□□□□ 0.9
PDLIM3-212ENST00000620787 MRPS9P82933 396 aaKnown RBP20.68■□□□□ 0.9
PDLIM3-212ENST00000620787 GPS1Q13098 491 aa20.68■□□□□ 0.9
PDLIM3-212ENST00000620787 RASA2Q15283 850 aa20.68■□□□□ 0.9
PDLIM3-212ENST00000620787 ZYXQ15942 572 aaKnown RBP20.68■□□□□ 0.9
PDLIM3-212ENST00000620787 AOC3Q16853 763 aa20.68■□□□□ 0.9
PDLIM3-212ENST00000620787 ATP13A4Q4VNC1 1196 aa20.68■□□□□ 0.9
PDLIM3-212ENST00000620787 PLEKHA7Q6IQ23 1121 aa20.68■□□□□ 0.9
PDLIM3-212ENST00000620787 PASD1Q8IV76 773 aa20.68■□□□□ 0.9
PDLIM3-212ENST00000620787 AGBL1Q96MI9 1066 aa20.68■□□□□ 0.9
PDLIM3-212ENST00000620787 ADAM33Q9BZ11 813 aa20.68■□□□□ 0.9
PDLIM3-212ENST00000620787 YIPF3Q9GZM5 350 aa20.68■□□□□ 0.9
PDLIM3-212ENST00000620787 PSMC3IPQ9P2W1 217 aaPredicted RBP20.68■□□□□ 0.9
PDLIM3-212ENST00000620787 SLC24A2Q9UI40 661 aa20.68■□□□□ 0.9
PDLIM3-212ENST00000620787 ZNF148Q9UQR1 794 aa20.68■□□□□ 0.9
PDLIM3-212ENST00000620787 ECE2O60344 883 aa20.67■□□□□ 0.9
PDLIM3-212ENST00000620787 PLA2G6O60733 806 aa20.67■□□□□ 0.9
PDLIM3-212ENST00000620787 ATP4AP20648 1035 aa20.67■□□□□ 0.9
PDLIM3-212ENST00000620787 BPIFB4P59827 614 aa20.67■□□□□ 0.9
PDLIM3-212ENST00000620787 DMP1Q13316 513 aaPredicted RBP20.67■□□□□ 0.9
PDLIM3-212ENST00000620787 MORF4L2Q15014 288 aa20.67■□□□□ 0.9
PDLIM3-212ENST00000620787 MAPK6Q16659 721 aa20.67■□□□□ 0.9
PDLIM3-212ENST00000620787 PLEKHG4Q58EX7 1191 aa20.67■□□□□ 0.9
PDLIM3-212ENST00000620787 KAZNQ674X7 775 aa20.67■□□□□ 0.9
PDLIM3-212ENST00000620787 ZBED8Q8IZ13 594 aa20.67■□□□□ 0.9
PDLIM3-212ENST00000620787 GPD1LQ8N335 351 aa20.67■□□□□ 0.9
PDLIM3-212ENST00000620787 MRRFQ96E11 262 aaKnown RBP20.67■□□□□ 0.9
PDLIM3-212ENST00000620787 MRPL47Q9HD33 250 aaKnown RBP20.67■□□□□ 0.9
PDLIM3-212ENST00000620787 NPHS2Q9NP85 383 aa20.67■□□□□ 0.9
PDLIM3-212ENST00000620787 KMT5AQ9NQR1 393 aa20.67■□□□□ 0.9
PDLIM3-212ENST00000620787 SAR1AQ9NR31 198 aa20.67■□□□□ 0.9
PDLIM3-212ENST00000620787 KANSL3Q9P2N6 904 aa20.67■□□□□ 0.9
PDLIM3-212ENST00000620787 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.67■□□□□ 0.9
PDLIM3-212ENST00000620787 HERC5Q9UII4 1024 aaKnown RBP20.67■□□□□ 0.9
PDLIM3-212ENST00000620787 ARID2Q68CP9 1835 aa20.67■□□□□ 0.9
PDLIM3-212ENST00000620787 EME2A4GXA9 379 aaPredicted RBP20.67■□□□□ 0.9
PDLIM3-212ENST00000620787 DPPA5A6NC42 116 aa20.67■□□□□ 0.9
PDLIM3-212ENST00000620787 TCF4P15884 667 aa20.67■□□□□ 0.9
PDLIM3-212ENST00000620787 PCK1P35558 622 aa20.67■□□□□ 0.9
PDLIM3-212ENST00000620787 C11orf91Q3C1V1 193 aa20.67■□□□□ 0.9
PDLIM3-212ENST00000620787 RNASEH2BQ5TBB1 312 aaKnown RBP20.67■□□□□ 0.9
PDLIM3-212ENST00000620787 CLNKQ7Z7G1 428 aa20.67■□□□□ 0.9
PDLIM3-212ENST00000620787 FAM160B2Q86V87 743 aa20.67■□□□□ 0.9
PDLIM3-212ENST00000620787 FBXO41Q8TF61 875 aa20.67■□□□□ 0.9
PDLIM3-212ENST00000620787 SLITRK1Q96PX8 696 aa20.67■□□□□ 0.9
PDLIM3-212ENST00000620787 MIPEPQ99797 713 aa20.67■□□□□ 0.9
PDLIM3-212ENST00000620787 UPP2O95045 317 aa20.66■□□□□ 0.9
PDLIM3-212ENST00000620787 ACADSP16219 412 aa20.66■□□□□ 0.9
PDLIM3-212ENST00000620787 ALDH1B1P30837 517 aa20.66■□□□□ 0.9
PDLIM3-212ENST00000620787 SSTR3P32745 418 aaPredicted RBP20.66■□□□□ 0.9
PDLIM3-212ENST00000620787 EFHC2Q5JST6 749 aa20.66■□□□□ 0.9
PDLIM3-212ENST00000620787 MTDHQ86UE4 582 aaKnown RBP20.66■□□□□ 0.9
PDLIM3-212ENST00000620787 LMNTD2Q8IXW0 634 aa20.66■□□□□ 0.9
PDLIM3-212ENST00000620787 ZNF398Q8TD17 642 aa20.66■□□□□ 0.9
PDLIM3-212ENST00000620787 PRMT6Q96LA8 375 aaPredicted RBP20.66■□□□□ 0.9
PDLIM3-212ENST00000620787 PPCSQ9HAB8 311 aa20.66■□□□□ 0.9
PDLIM3-212ENST00000620787 SSU72Q9NP77 194 aaKnown RBP20.66■□□□□ 0.9
PDLIM3-212ENST00000620787 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.66■□□□□ 0.9
PDLIM3-212ENST00000620787 NFIBO00712 420 aa20.66■□□□□ 0.9
PDLIM3-212ENST00000620787 TLR3O15455 904 aaKnown RBP20.66■□□□□ 0.9
PDLIM3-212ENST00000620787 ZWINTO95229 277 aa20.66■□□□□ 0.9
PDLIM3-212ENST00000620787 ACO1P21399 889 aaKnown RBP20.66■□□□□ 0.9
PDLIM3-212ENST00000620787 MARK3P27448 753 aa20.66■□□□□ 0.9
PDLIM3-212ENST00000620787 PSMC5P62195 406 aa20.66■□□□□ 0.9
PDLIM3-212ENST00000620787 MTMR1Q13613 665 aa20.66■□□□□ 0.9
PDLIM3-212ENST00000620787 LMBRD2Q68DH5 695 aaPredicted RBP20.66■□□□□ 0.9
PDLIM3-212ENST00000620787 MFSD7Q6UXD7 560 aa20.66■□□□□ 0.9
PDLIM3-212ENST00000620787 RCOR2Q8IZ40 523 aa20.66■□□□□ 0.9
PDLIM3-212ENST00000620787 FAM213AQ9BRX8 229 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms