RNA–Protein interactions for RNA: ENST00000620739.4

TP53-226, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,579 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-226ENST00000620739 LDHAP00338 332 aaKnown RBP12.13□□□□□ -0.47
TP53-226ENST00000620739 HOXD8P13378 290 aaPredicted RBP12.13□□□□□ -0.47
TP53-226ENST00000620739 CHRNB2P17787 502 aa12.13□□□□□ -0.47
TP53-226ENST00000620739 ARF4P18085 180 aaPredicted RBP12.13□□□□□ -0.47
TP53-226ENST00000620739 MFAP3P55082 362 aa12.13□□□□□ -0.47
TP53-226ENST00000620739 TFAMQ00059 246 aaKnown RBP12.13□□□□□ -0.47
TP53-226ENST00000620739 C2CD6Q53TS8 623 aa12.13□□□□□ -0.47
TP53-226ENST00000620739 MPZL3Q6UWV2 235 aa12.13□□□□□ -0.47
TP53-226ENST00000620739 RUFY4Q6ZNE9 571 aa12.13□□□□□ -0.47
TP53-226ENST00000620739 USP37Q86T82 979 aa12.13□□□□□ -0.47
TP53-226ENST00000620739 NOA1Q8NC60 698 aaKnown RBP12.13□□□□□ -0.47
TP53-226ENST00000620739 ARHGEF26Q96DR7 871 aa12.13□□□□□ -0.47
TP53-226ENST00000620739 TLR10Q9BXR5 811 aa12.13□□□□□ -0.47
TP53-226ENST00000620739 C2orf40Q9H1Z8 148 aa12.13□□□□□ -0.47
TP53-226ENST00000620739 CPSF3Q9UKF6 684 aaKnown RBP12.13□□□□□ -0.47
TP53-226ENST00000620739 MYH10P35580 1976 aa12.12□□□□□ -0.47
TP53-226ENST00000620739 GRID2IPA4D2P6 1211 aa12.12□□□□□ -0.47
TP53-226ENST00000620739 TMEM88BA6NKF7 163 aa12.12□□□□□ -0.47
TP53-226ENST00000620739 CA12O43570 354 aa12.12□□□□□ -0.47
TP53-226ENST00000620739 PHACTR2O75167 634 aa12.12□□□□□ -0.47
TP53-226ENST00000620739 PGK1P00558 417 aa12.12□□□□□ -0.47
TP53-226ENST00000620739 MYL3P08590 195 aa12.12□□□□□ -0.47
TP53-226ENST00000620739 CFHP08603 1231 aa12.12□□□□□ -0.47
TP53-226ENST00000620739 SMIM10L2AP0DMW4 78 aa12.12□□□□□ -0.47
TP53-226ENST00000620739 SMIM10L2BP0DMW5 78 aa12.12□□□□□ -0.47
TP53-226ENST00000620739 PROZP22891 400 aa12.12□□□□□ -0.47
TP53-226ENST00000620739 LAMA2P24043 3122 aaKnown RBP12.12□□□□□ -0.47
TP53-226ENST00000620739 TMOD1P28289 359 aa12.12□□□□□ -0.47
TP53-226ENST00000620739 GTF2H1P32780 548 aa12.12□□□□□ -0.47
TP53-226ENST00000620739 RGS2P41220 211 aa12.12□□□□□ -0.47
TP53-226ENST00000620739 TM4SF4P48230 202 aa12.12□□□□□ -0.47
TP53-226ENST00000620739 FLT3LGP49771 235 aa12.12□□□□□ -0.47
TP53-226ENST00000620739 RNASE9P60153 205 aaKnown RBP12.12□□□□□ -0.47
TP53-226ENST00000620739 CCDC80Q76M96 950 aa12.12□□□□□ -0.47
TP53-226ENST00000620739 TRIB2Q92519 343 aa12.12□□□□□ -0.47
TP53-226ENST00000620739 MS4A14Q96JA4 679 aa12.12□□□□□ -0.47
TP53-226ENST00000620739 HOMER3Q9NSC5 361 aa12.12□□□□□ -0.47
TP53-226ENST00000620739 NOCTQ9UK39 431 aaKnown RBP12.12□□□□□ -0.47
TP53-226ENST00000620739 FBXO9Q9UK97 447 aaPredicted RBP12.12□□□□□ -0.47
TP53-226ENST00000620739 MAGEB2O15479 319 aa12.12□□□□□ -0.47
TP53-226ENST00000620739 TREHO43280 583 aa12.12□□□□□ -0.47
TP53-226ENST00000620739 ATMINO43313 823 aaPredicted RBP12.12□□□□□ -0.47
TP53-226ENST00000620739 F2P00734 622 aa12.12□□□□□ -0.47
TP53-226ENST00000620739 H2AFZP0C0S5 128 aa12.12□□□□□ -0.47
TP53-226ENST00000620739 VDRP11473 427 aa12.12□□□□□ -0.47
TP53-226ENST00000620739 CYP11B1P15538 503 aa12.12□□□□□ -0.47
TP53-226ENST00000620739 MYL6P60660 151 aa12.12□□□□□ -0.47
TP53-226ENST00000620739 MRPS25P82663 173 aaKnown RBP12.12□□□□□ -0.47
TP53-226ENST00000620739 NSUN2Q08J23 767 aaKnown RBP eCLIP12.12□□□□□ -0.47
TP53-226ENST00000620739 NCOA4Q13772 614 aa12.12□□□□□ -0.47
TP53-226ENST00000620739 H2AFVQ71UI9 128 aa12.12□□□□□ -0.47
TP53-226ENST00000620739 SRGAP1Q7Z6B7 1085 aa12.12□□□□□ -0.47
TP53-226ENST00000620739 VPS36Q86VN1 386 aa12.12□□□□□ -0.47
TP53-226ENST00000620739 BRSK2Q8IWQ3 736 aa12.12□□□□□ -0.47
TP53-226ENST00000620739 CCDC114Q96M63 670 aa12.12□□□□□ -0.47
TP53-226ENST00000620739 EFCAB8A8MWE9 144 aa12.11□□□□□ -0.47
TP53-226ENST00000620739 ASAP2O43150 1006 aa12.11□□□□□ -0.47
TP53-226ENST00000620739 FTLP02792 175 aaPredicted RBP12.11□□□□□ -0.47
TP53-226ENST00000620739 C6orf222P0C671 652 aaPredicted RBP12.11□□□□□ -0.47
TP53-226ENST00000620739 PHKA2P46019 1235 aa12.11□□□□□ -0.47
TP53-226ENST00000620739 SREBF2Q12772 1141 aa12.11□□□□□ -0.47
TP53-226ENST00000620739 THEMIS2Q5TEJ8 643 aa12.11□□□□□ -0.47
TP53-226ENST00000620739 PHLDB2Q86SQ0 1253 aa12.11□□□□□ -0.47
TP53-226ENST00000620739 ADAMTS19Q8TE59 1207 aa12.11□□□□□ -0.47
TP53-226ENST00000620739 DNAJB3Q8WWF6 145 aa12.11□□□□□ -0.47
TP53-226ENST00000620739 OSMRQ99650 979 aa12.11□□□□□ -0.47
TP53-226ENST00000620739 CGRRF1Q99675 332 aa12.11□□□□□ -0.47
TP53-226ENST00000620739 APBA2Q99767 749 aa12.11□□□□□ -0.47
TP53-226ENST00000620739 TRPV5Q9NQA5 729 aa12.11□□□□□ -0.47
TP53-226ENST00000620739 C1orf112Q9NSG2 853 aa12.11□□□□□ -0.47
TP53-226ENST00000620739 BARX2Q9UMQ3 279 aaPredicted RBP12.11□□□□□ -0.47
TP53-226ENST00000620739 SNX12Q9UMY4 172 aa12.11□□□□□ -0.47
TP53-226ENST00000620739 HES2Q9Y543 173 aa12.11□□□□□ -0.47
TP53-226ENST00000620739 TRPM7Q96QT4 1865 aa12.11□□□□□ -0.47
TP53-226ENST00000620739 EIF3FO00303 357 aaPredicted RBP12.11□□□□□ -0.47
TP53-226ENST00000620739 FMO1Q01740 532 aa12.11□□□□□ -0.47
TP53-226ENST00000620739 PRKCZQ05513 592 aa12.11□□□□□ -0.47
TP53-226ENST00000620739 WDR44Q5JSH3 913 aa12.11□□□□□ -0.47
TP53-226ENST00000620739 RSRC2Q7L4I2 434 aaKnown RBP12.11□□□□□ -0.47
TP53-226ENST00000620739 SDCCAG8Q86SQ7 713 aaPredicted RBP12.11□□□□□ -0.47
TP53-226ENST00000620739 SLC35G2Q8TBE7 412 aa12.11□□□□□ -0.47
TP53-226ENST00000620739 TMEM40Q8WWA1 233 aa12.11□□□□□ -0.47
TP53-226ENST00000620739 SPDL1Q96EA4 605 aa12.11□□□□□ -0.47
TP53-226ENST00000620739 ALS2CR12Q96Q35 445 aa12.11□□□□□ -0.47
TP53-226ENST00000620739 PDZD7Q9H5P4 517 aa12.11□□□□□ -0.47
TP53-226ENST00000620739 GRXCR2A6NFK2 248 aa12.1□□□□□ -0.47
TP53-226ENST00000620739 KIAA0391O15091 583 aaKnown RBP12.1□□□□□ -0.47
TP53-226ENST00000620739 NFICP08651 508 aa12.1□□□□□ -0.47
TP53-226ENST00000620739 RHOXF2BP0C7M4 288 aa12.1□□□□□ -0.47
TP53-226ENST00000620739 STAG3L1P0CL83 205 aa12.1□□□□□ -0.47
TP53-226ENST00000620739 APLP1P51693 650 aa12.1□□□□□ -0.47
TP53-226ENST00000620739 GUCY2FP51841 1108 aa12.1□□□□□ -0.47
TP53-226ENST00000620739 HTRA3P83110 453 aa12.1□□□□□ -0.47
TP53-226ENST00000620739 CREG2Q8IUH2 290 aa12.1□□□□□ -0.47
TP53-226ENST00000620739 RNF10Q8N5U6 811 aaKnown RBP12.1□□□□□ -0.47
TP53-226ENST00000620739 DDX1Q92499 740 aaKnown RBP12.1□□□□□ -0.47
TP53-226ENST00000620739 RHOXF2Q9BQY4 288 aa12.1□□□□□ -0.47
TP53-226ENST00000620739 LUC7LQ9NQ29 371 aaKnown RBP12.1□□□□□ -0.47
TP53-226ENST00000620739 COG5Q9UP83 839 aa12.1□□□□□ -0.47
TP53-226ENST00000620739 TNFSF13BQ9Y275 285 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms