RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 RNASELQ05823 741 aaKnown RBP8.6□□□□□ -1.03
CPNE3-209ENST00000620393 RAPGEF1Q13905 1077 aa8.6□□□□□ -1.03
CPNE3-209ENST00000620393 SFMBT2Q5VUG0 894 aa8.6□□□□□ -1.03
CPNE3-209ENST00000620393 CD300LGQ6UXG3 332 aa8.6□□□□□ -1.03
CPNE3-209ENST00000620393 DPH6Q7L8W6 267 aa8.6□□□□□ -1.03
CPNE3-209ENST00000620393 LIMS2Q7Z4I7 341 aa8.6□□□□□ -1.03
CPNE3-209ENST00000620393 IRF2BP2Q7Z5L9 587 aa8.6□□□□□ -1.03
CPNE3-209ENST00000620393 FMNL3Q8IVF7 1028 aa8.6□□□□□ -1.03
CPNE3-209ENST00000620393 LRRC8AQ8IWT6 810 aa8.6□□□□□ -1.03
CPNE3-209ENST00000620393 FAM71AQ8IYT1 594 aa8.6□□□□□ -1.03
CPNE3-209ENST00000620393 PHOSPHO2Q8TCD6 241 aa8.6□□□□□ -1.03
CPNE3-209ENST00000620393 SHC3Q92529 594 aa8.6□□□□□ -1.03
CPNE3-209ENST00000620393 ZNF689Q96CS4 500 aaPredicted RBP8.6□□□□□ -1.03
CPNE3-209ENST00000620393 ZNF560Q96MR9 790 aa8.6□□□□□ -1.03
CPNE3-209ENST00000620393 TMEM175Q9BSA9 504 aa8.6□□□□□ -1.03
CPNE3-209ENST00000620393 MRPL9Q9BYD2 267 aaKnown RBP8.6□□□□□ -1.03
CPNE3-209ENST00000620393 BCO2Q9BYV7 579 aa8.6□□□□□ -1.03
CPNE3-209ENST00000620393 GPR88Q9GZN0 384 aa8.6□□□□□ -1.03
CPNE3-209ENST00000620393 FAM124BQ9H5Z6 455 aaPredicted RBP8.6□□□□□ -1.03
CPNE3-209ENST00000620393 NRDE2Q9H7Z3 1164 aa8.6□□□□□ -1.03
CPNE3-209ENST00000620393 ABHD10Q9NUJ1 306 aa8.6□□□□□ -1.03
CPNE3-209ENST00000620393 ZNHIT6Q9NWK9 470 aaKnown RBP8.6□□□□□ -1.03
CPNE3-209ENST00000620393 POLIQ9UNA4 740 aa8.6□□□□□ -1.03
CPNE3-209ENST00000620393 CNTN6Q9UQ52 1028 aa8.6□□□□□ -1.03
CPNE3-209ENST00000620393 ZBBXA8MT70 800 aa8.59□□□□□ -1.03
CPNE3-209ENST00000620393 F8VZ95 297 aa8.59□□□□□ -1.03
CPNE3-209ENST00000620393 B4GALT3O60512 393 aa8.59□□□□□ -1.03
CPNE3-209ENST00000620393 B3GAT3O94766 335 aa8.59□□□□□ -1.03
CPNE3-209ENST00000620393 CLSTN1O94985 981 aa8.59□□□□□ -1.03
CPNE3-209ENST00000620393 GALTP07902 379 aa8.59□□□□□ -1.03
CPNE3-209ENST00000620393 WEE2P0C1S8 567 aa8.59□□□□□ -1.03
CPNE3-209ENST00000620393 CCDC172P0C7W6 258 aa8.59□□□□□ -1.03
CPNE3-209ENST00000620393 FERP16591 822 aa8.59□□□□□ -1.03
CPNE3-209ENST00000620393 FECHP22830 423 aa8.59□□□□□ -1.03
CPNE3-209ENST00000620393 ASPAP45381 313 aa8.59□□□□□ -1.03
CPNE3-209ENST00000620393 AARSP49588 968 aaKnown RBP eCLIP8.59□□□□□ -1.03
CPNE3-209ENST00000620393 CDH8P55286 799 aa8.59□□□□□ -1.03
CPNE3-209ENST00000620393 YWHAEP62258 255 aaKnown RBP8.59□□□□□ -1.03
CPNE3-209ENST00000620393 TNNC1P63316 161 aa8.59□□□□□ -1.03
CPNE3-209ENST00000620393 CDK17Q00537 523 aa8.59□□□□□ -1.03
CPNE3-209ENST00000620393 ASIC2Q16515 512 aa8.59□□□□□ -1.03
CPNE3-209ENST00000620393 MEA1Q16626 185 aa8.59□□□□□ -1.03
CPNE3-209ENST00000620393 SV2CQ496J9 727 aa8.59□□□□□ -1.03
CPNE3-209ENST00000620393 HS1BP3Q53T59 392 aa8.59□□□□□ -1.03
CPNE3-209ENST00000620393 RASIP1Q5U651 963 aa8.59□□□□□ -1.03
CPNE3-209ENST00000620393 WDR59Q6PJI9 974 aa8.59□□□□□ -1.03
CPNE3-209ENST00000620393 TMTC1Q8IUR5 882 aa8.59□□□□□ -1.03
CPNE3-209ENST00000620393 TTC39CQ8N584 583 aa8.59□□□□□ -1.03
CPNE3-209ENST00000620393 UBR7Q8N806 425 aa8.59□□□□□ -1.03
CPNE3-209ENST00000620393 RABGGTAQ92696 567 aa8.59□□□□□ -1.03
CPNE3-209ENST00000620393 MMS19Q96T76 1030 aa8.59□□□□□ -1.03
CPNE3-209ENST00000620393 ARID3AQ99856 593 aa8.59□□□□□ -1.03
CPNE3-209ENST00000620393 BAG1Q99933 345 aaPredicted RBP8.59□□□□□ -1.03
CPNE3-209ENST00000620393 PAAF1Q9BRP4 392 aa8.59□□□□□ -1.03
CPNE3-209ENST00000620393 COLEC11Q9BWP8 271 aa8.59□□□□□ -1.03
CPNE3-209ENST00000620393 SDCBP2Q9H190 292 aa8.59□□□□□ -1.03
CPNE3-209ENST00000620393 CISHQ9NSE2 258 aa8.59□□□□□ -1.03
CPNE3-209ENST00000620393 CXXC1Q9P0U4 656 aaPredicted RBP8.59□□□□□ -1.03
CPNE3-209ENST00000620393 CACNG4Q9UBN1 327 aa8.59□□□□□ -1.03
CPNE3-209ENST00000620393 FAN1Q9Y2M0 1017 aa8.59□□□□□ -1.03
CPNE3-209ENST00000620393 SNX9Q9Y5X1 595 aa8.59□□□□□ -1.03
CPNE3-209ENST00000620393 BZW2Q9Y6E2 419 aaKnown RBP8.59□□□□□ -1.03
CPNE3-209ENST00000620393 MKI67P46013 3256 aaKnown RBP8.58□□□□□ -1.04
CPNE3-209ENST00000620393 TMEM189-UBE2V1I3L0A0 370 aa8.58□□□□□ -1.04
CPNE3-209ENST00000620393 CYB561D2O14569 222 aa8.58□□□□□ -1.04
CPNE3-209ENST00000620393 NRP1O14786 923 aa8.58□□□□□ -1.04
CPNE3-209ENST00000620393 CYP26A1O43174 497 aa8.58□□□□□ -1.04
CPNE3-209ENST00000620393 HUS1O60921 280 aa8.58□□□□□ -1.04
CPNE3-209ENST00000620393 TACC1O75410 805 aa8.58□□□□□ -1.04
CPNE3-209ENST00000620393 TADA2AO75478 443 aa8.58□□□□□ -1.04
CPNE3-209ENST00000620393 GFPT2O94808 682 aa8.58□□□□□ -1.04
CPNE3-209ENST00000620393 GJB5O95377 273 aa8.58□□□□□ -1.04
CPNE3-209ENST00000620393 SERPING1P05155 500 aa8.58□□□□□ -1.04
CPNE3-209ENST00000620393 SKILP12757 684 aa8.58□□□□□ -1.04
CPNE3-209ENST00000620393 KRT5P13647 590 aa8.58□□□□□ -1.04
CPNE3-209ENST00000620393 CLCN1P35523 988 aa8.58□□□□□ -1.04
CPNE3-209ENST00000620393 USP8P40818 1118 aa8.58□□□□□ -1.04
CPNE3-209ENST00000620393 PRKCIP41743 596 aa8.58□□□□□ -1.04
CPNE3-209ENST00000620393 OR1G1P47890 313 aa8.58□□□□□ -1.04
CPNE3-209ENST00000620393 BPIFB4P59827 614 aa8.58□□□□□ -1.04
CPNE3-209ENST00000620393 HTRA4P83105 476 aaPredicted RBP8.58□□□□□ -1.04
CPNE3-209ENST00000620393 SOWAHAQ2M3V2 549 aa8.58□□□□□ -1.04
CPNE3-209ENST00000620393 PAN2Q504Q3 1202 aaKnown RBP8.58□□□□□ -1.04
CPNE3-209ENST00000620393 TIGD5Q53EQ6 642 aa8.58□□□□□ -1.04
CPNE3-209ENST00000620393 E4F1Q66K89 784 aaPredicted RBP8.58□□□□□ -1.04
CPNE3-209ENST00000620393 HGSNATQ68CP4 663 aa8.58□□□□□ -1.04
CPNE3-209ENST00000620393 FAM117BQ6P1L5 589 aa8.58□□□□□ -1.04
CPNE3-209ENST00000620393 DSTYKQ6XUX3 929 aa8.58□□□□□ -1.04
CPNE3-209ENST00000620393 TMCO2Q7Z6W1 182 aaPredicted RBP8.58□□□□□ -1.04
CPNE3-209ENST00000620393 CMTR2Q8IYT2 770 aaKnown RBP8.58□□□□□ -1.04
CPNE3-209ENST00000620393 LRRC43Q8N309 656 aa8.58□□□□□ -1.04
CPNE3-209ENST00000620393 TOP6BLQ8N6T0 577 aa8.58□□□□□ -1.04
CPNE3-209ENST00000620393 C3orf58Q8NDZ4 430 aa8.58□□□□□ -1.04
CPNE3-209ENST00000620393 CCDC112Q8NEF3 446 aa8.58□□□□□ -1.04
CPNE3-209ENST00000620393 APPL2Q8NEU8 664 aa8.58□□□□□ -1.04
CPNE3-209ENST00000620393 TET1Q8NFU7 2136 aa8.58□□□□□ -1.04
CPNE3-209ENST00000620393 SENP8Q96LD8 212 aa8.58□□□□□ -1.04
CPNE3-209ENST00000620393 ZNF830Q96NB3 372 aaPredicted RBP8.58□□□□□ -1.04
CPNE3-209ENST00000620393 CHP1Q99653 195 aa8.58□□□□□ -1.04
CPNE3-209ENST00000620393 MRPL45Q9BRJ2 306 aaKnown RBP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms