RNA–Protein interactions for RNA: ENST00000619119.4

SEMA3B-214, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-214ENST00000619119 ATP11CQ8NB49 1132 aa16.73■□□□□ 0.27
SEMA3B-214ENST00000619119 CLEC4DQ8WXI8 215 aa16.73■□□□□ 0.27
SEMA3B-214ENST00000619119 TSG101Q99816 390 aa16.73■□□□□ 0.27
SEMA3B-214ENST00000619119 CADM1Q9BY67 442 aaKnown RBP16.73■□□□□ 0.27
SEMA3B-214ENST00000619119 NKIRAS1Q9NYS0 192 aa16.73■□□□□ 0.27
SEMA3B-214ENST00000619119 GPRC5DQ9NZD1 345 aa16.73■□□□□ 0.27
SEMA3B-214ENST00000619119 ARMCX3Q9UH62 379 aaPredicted RBP16.73■□□□□ 0.27
SEMA3B-214ENST00000619119 LTBP3Q9NS15 1303 aa16.73■□□□□ 0.27
SEMA3B-214ENST00000619119 DDNO94850 711 aaPredicted RBP16.73■□□□□ 0.27
SEMA3B-214ENST00000619119 ASMTLO95671 621 aa16.73■□□□□ 0.27
SEMA3B-214ENST00000619119 MKRN3Q13064 507 aaKnown RBP16.73■□□□□ 0.27
SEMA3B-214ENST00000619119 ZNF211Q13398 564 aaPredicted RBP16.73■□□□□ 0.27
SEMA3B-214ENST00000619119 GRAMD4Q6IC98 578 aa16.73■□□□□ 0.27
SEMA3B-214ENST00000619119 TRIM67Q6ZTA4 783 aa16.73■□□□□ 0.27
SEMA3B-214ENST00000619119 LRRC57Q8N9N7 239 aa16.73■□□□□ 0.27
SEMA3B-214ENST00000619119 NACA2Q9H009 215 aa16.73■□□□□ 0.27
SEMA3B-214ENST00000619119 EHMT1Q9H9B1 1298 aa16.73■□□□□ 0.27
SEMA3B-214ENST00000619119 SLC38A10Q9HBR0 1119 aa16.73■□□□□ 0.27
SEMA3B-214ENST00000619119 SLCO1B3Q9NPD5 702 aa16.73■□□□□ 0.27
SEMA3B-214ENST00000619119 MTRF1LQ9UGC7 380 aaKnown RBP16.73■□□□□ 0.27
SEMA3B-214ENST00000619119 IPO5O00410 1097 aaKnown RBP16.73■□□□□ 0.27
SEMA3B-214ENST00000619119 DDX3XO00571 662 aaKnown RBP eCLIP16.73■□□□□ 0.271e-8■□□□□ 10.9
SEMA3B-214ENST00000619119 PSMD10O75832 226 aa16.73■□□□□ 0.27
SEMA3B-214ENST00000619119 SLITRK3O94933 977 aa16.73■□□□□ 0.27
SEMA3B-214ENST00000619119 GRIA2P42262 883 aa16.73■□□□□ 0.27
SEMA3B-214ENST00000619119 RPS6P62753 249 aaKnown RBP16.73■□□□□ 0.27
SEMA3B-214ENST00000619119 SCYL3Q8IZE3 742 aa16.73■□□□□ 0.27
SEMA3B-214ENST00000619119 SCFD1Q8WVM8 642 aa16.73■□□□□ 0.27
SEMA3B-214ENST00000619119 PPP1R9AQ9ULJ8 1098 aa16.73■□□□□ 0.27
SEMA3B-214ENST00000619119 R3HDM2Q9Y2K5 976 aaKnown RBP16.73■□□□□ 0.27
SEMA3B-214ENST00000619119 RIPK3Q9Y572 518 aa16.73■□□□□ 0.27
SEMA3B-214ENST00000619119 PITPNM2Q9BZ72 1349 aa16.72■□□□□ 0.27
SEMA3B-214ENST00000619119 PTPRAP18433 802 aa16.72■□□□□ 0.27
SEMA3B-214ENST00000619119 BACE1P56817 501 aa16.72■□□□□ 0.27
SEMA3B-214ENST00000619119 SYT2Q8N9I0 419 aaPredicted RBP16.72■□□□□ 0.27
SEMA3B-214ENST00000619119 MAGEB18Q96M61 343 aa16.72■□□□□ 0.27
SEMA3B-214ENST00000619119 TAAR1Q96RJ0 339 aa16.72■□□□□ 0.27
SEMA3B-214ENST00000619119 CYTH2Q99418 400 aa16.72■□□□□ 0.27
SEMA3B-214ENST00000619119 SH2D3AQ9BRG2 576 aa16.72■□□□□ 0.27
SEMA3B-214ENST00000619119 WRAP73Q9P2S5 460 aaPredicted RBP16.72■□□□□ 0.27
SEMA3B-214ENST00000619119 KIAA0391O15091 583 aaKnown RBP16.72■□□□□ 0.27
SEMA3B-214ENST00000619119 PABPC4LP0CB38 370 aaKnown RBP16.72■□□□□ 0.27
SEMA3B-214ENST00000619119 YARSP54577 528 aaKnown RBP16.72■□□□□ 0.27
SEMA3B-214ENST00000619119 MTTPP55157 894 aa16.72■□□□□ 0.27
SEMA3B-214ENST00000619119 ASIC2Q16515 512 aa16.72■□□□□ 0.27
SEMA3B-214ENST00000619119 TNFAIP8L3Q5GJ75 292 aa16.72■□□□□ 0.27
SEMA3B-214ENST00000619119 ZNF280CQ8ND82 737 aa16.72■□□□□ 0.27
SEMA3B-214ENST00000619119 TPCN2Q8NHX9 752 aa16.72■□□□□ 0.27
SEMA3B-214ENST00000619119 UPF1Q92900 1129 aaKnown RBP eCLIP16.72■□□□□ 0.275e-9■■■■■ 29.1
SEMA3B-214ENST00000619119 DCTN3O75935 186 aa16.71■□□□□ 0.27
SEMA3B-214ENST00000619119 EYA4O95677 639 aa16.71■□□□□ 0.27
SEMA3B-214ENST00000619119 CD97P48960 835 aa16.71■□□□□ 0.27
SEMA3B-214ENST00000619119 THOC5Q13769 683 aaKnown RBP16.71■□□□□ 0.27
SEMA3B-214ENST00000619119 LRRC55Q6ZSA7 311 aa16.71■□□□□ 0.27
SEMA3B-214ENST00000619119 SRRM1Q8IYB3 904 aaKnown RBP16.71■□□□□ 0.27
SEMA3B-214ENST00000619119 MCUR1Q96AQ8 359 aa16.71■□□□□ 0.27
SEMA3B-214ENST00000619119 HSPBAP1Q96EW2 488 aa16.71■□□□□ 0.27
SEMA3B-214ENST00000619119 KCNH7Q9NS40 1196 aa16.71■□□□□ 0.27
SEMA3B-214ENST00000619119 CEP72Q9P209 647 aa16.71■□□□□ 0.27
SEMA3B-214ENST00000619119 ZFP69BQ9UJL9 534 aa16.71■□□□□ 0.27
SEMA3B-214ENST00000619119 PCDHA2Q9Y5H9 948 aa16.71■□□□□ 0.27
SEMA3B-214ENST00000619119 ATAD5Q96QE3 1844 aa16.71■□□□□ 0.27
SEMA3B-214ENST00000619119 TMEM247A6NEH6 219 aa16.71■□□□□ 0.27
SEMA3B-214ENST00000619119 EXOC3O60645 756 aa16.71■□□□□ 0.27
SEMA3B-214ENST00000619119 RPL21P46778 160 aaKnown RBP16.71■□□□□ 0.27
SEMA3B-214ENST00000619119 GSTM4Q03013 218 aa16.71■□□□□ 0.27
SEMA3B-214ENST00000619119 LRRC63Q05C16 580 aa16.71■□□□□ 0.27
SEMA3B-214ENST00000619119 LRRC8BQ6P9F7 803 aa16.71■□□□□ 0.27
SEMA3B-214ENST00000619119 RASGEF1CQ8N431 466 aa16.71■□□□□ 0.27
SEMA3B-214ENST00000619119 SLC5A5Q92911 643 aa16.71■□□□□ 0.27
SEMA3B-214ENST00000619119 GRAMD1AQ96CP6 724 aa16.71■□□□□ 0.27
SEMA3B-214ENST00000619119 HSD17B14Q9BPX1 270 aa16.71■□□□□ 0.27
SEMA3B-214ENST00000619119 METTL14Q9HCE5 456 aaKnown RBP16.71■□□□□ 0.27
SEMA3B-214ENST00000619119 EFR3BQ9Y2G0 817 aa16.71■□□□□ 0.27
SEMA3B-214ENST00000619119 PGM3O95394 542 aa16.71■□□□□ 0.26
SEMA3B-214ENST00000619119 ZBTB48P10074 688 aaPredicted RBP16.71■□□□□ 0.26
SEMA3B-214ENST00000619119 HARSP12081 509 aaKnown RBP16.71■□□□□ 0.26
SEMA3B-214ENST00000619119 HSD17B4P51659 736 aa16.71■□□□□ 0.26
SEMA3B-214ENST00000619119 PTENP60484 403 aa16.71■□□□□ 0.26
SEMA3B-214ENST00000619119 COBLL1Q53SF7 1204 aa16.71■□□□□ 0.26
SEMA3B-214ENST00000619119 SYTL5Q8TDW5 730 aaPredicted RBP16.71■□□□□ 0.26
SEMA3B-214ENST00000619119 MXRA8Q9BRK3 442 aa16.71■□□□□ 0.26
SEMA3B-214ENST00000619119 FHDC1Q9C0D6 1143 aaPredicted RBP16.71■□□□□ 0.26
SEMA3B-214ENST00000619119 IKZF4Q9H2S9 585 aa16.71■□□□□ 0.26
SEMA3B-214ENST00000619119 BTBD7Q9P203 1132 aa16.71■□□□□ 0.26
SEMA3B-214ENST00000619119 STX18Q9P2W9 335 aaKnown RBP16.71■□□□□ 0.26
SEMA3B-214ENST00000619119 PHTF1Q9UMS5 762 aa16.71■□□□□ 0.26
SEMA3B-214ENST00000619119 HEY1Q9Y5J3 304 aa16.71■□□□□ 0.26
SEMA3B-214ENST00000619119 UMODL1Q5DID0 1318 aa16.71■□□□□ 0.26
SEMA3B-214ENST00000619119 PEX10O60683 326 aa16.7■□□□□ 0.26
SEMA3B-214ENST00000619119 ZBED4O75132 1171 aa16.7■□□□□ 0.26
SEMA3B-214ENST00000619119 TBCAO75347 108 aaKnown RBP16.7■□□□□ 0.26
SEMA3B-214ENST00000619119 DSG1Q02413 1049 aa16.7■□□□□ 0.26
SEMA3B-214ENST00000619119 TMEM259Q4ZIN3 620 aa16.7■□□□□ 0.26
SEMA3B-214ENST00000619119 MFSD5Q6N075 450 aa16.7■□□□□ 0.26
SEMA3B-214ENST00000619119 ISLR2Q6UXK2 745 aa16.7■□□□□ 0.26
SEMA3B-214ENST00000619119 APOBEC3FQ8IUX4 373 aaKnown RBP16.7■□□□□ 0.26
SEMA3B-214ENST00000619119 VPS52Q8N1B4 723 aa16.7■□□□□ 0.26
SEMA3B-214ENST00000619119 SMC6Q96SB8 1091 aa16.7■□□□□ 0.26
SEMA3B-214ENST00000619119 SYNCQ9H7C4 482 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms