RNA–Protein interactions for RNA: ENST00000618939.4

CNOT3-210, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 5

Gene CNOT3, Length 4,516 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-210ENST00000618939 ZWINTO95229 277 aa14.63□□□□□ -0.07
CNOT3-210ENST00000618939 APRTP07741 180 aa14.63□□□□□ -0.07
CNOT3-210ENST00000618939 ADORA2BP29275 332 aa14.63□□□□□ -0.07
CNOT3-210ENST00000618939 RGS7P49802 495 aa14.63□□□□□ -0.07
CNOT3-210ENST00000618939 TPD52P55327 224 aaPredicted RBP14.63□□□□□ -0.07
CNOT3-210ENST00000618939 CXCL9Q07325 125 aa14.63□□□□□ -0.07
CNOT3-210ENST00000618939 C3orf62Q6ZUJ4 267 aa14.63□□□□□ -0.07
CNOT3-210ENST00000618939 CCDC117Q8IWD4 279 aaPredicted RBP14.63□□□□□ -0.07
CNOT3-210ENST00000618939 SPATA18Q8TC71 538 aa14.63□□□□□ -0.07
CNOT3-210ENST00000618939 ALKBH8Q96BT7 664 aaKnown RBP14.63□□□□□ -0.07
CNOT3-210ENST00000618939 KIAA1683Q9H0B3 1180 aa14.63□□□□□ -0.07
CNOT3-210ENST00000618939 CPSF2Q9P2I0 782 aaKnown RBP14.63□□□□□ -0.07
CNOT3-210ENST00000618939 STOML1Q9UBI4 398 aa14.63□□□□□ -0.07
CNOT3-210ENST00000618939 F5H423 210 aaPredicted RBP14.62□□□□□ -0.07
CNOT3-210ENST00000618939 RARAP10276 462 aa14.62□□□□□ -0.07
CNOT3-210ENST00000618939 KITP10721 976 aa14.62□□□□□ -0.07
CNOT3-210ENST00000618939 DLG4P78352 724 aa14.62□□□□□ -0.07
CNOT3-210ENST00000618939 RBP5P82980 135 aa14.62□□□□□ -0.07
CNOT3-210ENST00000618939 KIF22Q14807 665 aa14.62□□□□□ -0.07
CNOT3-210ENST00000618939 KYAT1Q16773 422 aa14.62□□□□□ -0.07
CNOT3-210ENST00000618939 CDR2LQ86X02 465 aaPredicted RBP14.62□□□□□ -0.07
CNOT3-210ENST00000618939 METTL23Q86XA0 190 aa14.62□□□□□ -0.07
CNOT3-210ENST00000618939 SHISA4Q96DD7 197 aa14.62□□□□□ -0.07
CNOT3-210ENST00000618939 ANGPTL2Q9UKU9 493 aa14.62□□□□□ -0.07
CNOT3-210ENST00000618939 STAP1Q9ULZ2 295 aa14.62□□□□□ -0.07
CNOT3-210ENST00000618939 ASB14A6NK59 587 aa14.62□□□□□ -0.07
CNOT3-210ENST00000618939 OGTO15294 1046 aa14.62□□□□□ -0.07
CNOT3-210ENST00000618939 MAP3K7O43318 606 aa14.62□□□□□ -0.07
CNOT3-210ENST00000618939 MCOLN2Q8IZK6 566 aa14.62□□□□□ -0.07
CNOT3-210ENST00000618939 EPS8L1Q8TE68 723 aa14.62□□□□□ -0.07
CNOT3-210ENST00000618939 SPIRE2Q8WWL2 714 aa14.62□□□□□ -0.07
CNOT3-210ENST00000618939 ELMO3Q96BJ8 720 aa14.62□□□□□ -0.07
CNOT3-210ENST00000618939 PURBQ96QR8 312 aaKnown RBP14.62□□□□□ -0.07
CNOT3-210ENST00000618939 SCN11AQ9UI33 1791 aa14.62□□□□□ -0.07
CNOT3-210ENST00000618939 GSTA1P08263 222 aa14.62□□□□□ -0.07
CNOT3-210ENST00000618939 GSTA2P09210 222 aa14.62□□□□□ -0.07
CNOT3-210ENST00000618939 DSTYKQ6XUX3 929 aa14.62□□□□□ -0.07
CNOT3-210ENST00000618939 CGRRF1Q99675 332 aa14.62□□□□□ -0.07
CNOT3-210ENST00000618939 MTMR12Q9C0I1 747 aa14.62□□□□□ -0.07
CNOT3-210ENST00000618939 VPS11Q9H270 941 aa14.62□□□□□ -0.07
CNOT3-210ENST00000618939 G3BP2Q9UN86 482 aaKnown RBP14.62□□□□□ -0.07
CNOT3-210ENST00000618939 PCDHA3Q9Y5H8 950 aa14.62□□□□□ -0.07
CNOT3-210ENST00000618939 SNX9Q9Y5X1 595 aa14.62□□□□□ -0.07
CNOT3-210ENST00000618939 NOL4O94818 638 aa14.62□□□□□ -0.07
CNOT3-210ENST00000618939 LCA5LO95447 670 aa14.62□□□□□ -0.07
CNOT3-210ENST00000618939 TCF7P36402 384 aaPredicted RBP14.62□□□□□ -0.07
CNOT3-210ENST00000618939 GCNT1Q02742 428 aa14.62□□□□□ -0.07
CNOT3-210ENST00000618939 TMEM132DQ14C87 1099 aa14.62□□□□□ -0.07
CNOT3-210ENST00000618939 PLCB4Q15147 1175 aa14.62□□□□□ -0.07
CNOT3-210ENST00000618939 MMEL1Q495T6 779 aa14.62□□□□□ -0.07
CNOT3-210ENST00000618939 ZCWPW2Q504Y3 356 aa14.62□□□□□ -0.07
CNOT3-210ENST00000618939 KLF6Q99612 283 aaPredicted RBP14.62□□□□□ -0.07
CNOT3-210ENST00000618939 RSAD1Q9HA92 442 aa14.62□□□□□ -0.07
CNOT3-210ENST00000618939 APOBEC2Q9Y235 224 aaKnown RBP14.62□□□□□ -0.07
CNOT3-210ENST00000618939 CREB3O43889 395 aa14.61□□□□□ -0.07
CNOT3-210ENST00000618939 ZFXP17010 805 aaPredicted RBP14.61□□□□□ -0.07
CNOT3-210ENST00000618939 CD302Q8IX05 232 aa14.61□□□□□ -0.07
CNOT3-210ENST00000618939 KIF2BQ8N4N8 673 aa14.61□□□□□ -0.07
CNOT3-210ENST00000618939 EXD1Q8NHP7 514 aa14.61□□□□□ -0.07
CNOT3-210ENST00000618939 ELP3Q9H9T3 547 aa14.61□□□□□ -0.07
CNOT3-210ENST00000618939 NPHS2Q9NP85 383 aa14.61□□□□□ -0.07
CNOT3-210ENST00000618939 RIPK2O43353 540 aa14.61□□□□□ -0.07
CNOT3-210ENST00000618939 GRAP2O75791 330 aa14.61□□□□□ -0.07
CNOT3-210ENST00000618939 IL18RAPO95256 599 aa14.61□□□□□ -0.07
CNOT3-210ENST00000618939 HSPA4LO95757 839 aa14.61□□□□□ -0.07
CNOT3-210ENST00000618939 TTC4O95801 387 aa14.61□□□□□ -0.07
CNOT3-210ENST00000618939 DNAJC3Q13217 504 aa14.61□□□□□ -0.07
CNOT3-210ENST00000618939 STILQ15468 1287 aa14.61□□□□□ -0.07
CNOT3-210ENST00000618939 CCNG2Q16589 344 aa14.61□□□□□ -0.07
CNOT3-210ENST00000618939 SHROOM1Q2M3G4 852 aaPredicted RBP14.61□□□□□ -0.07
CNOT3-210ENST00000618939 RASIP1Q5U651 963 aa14.61□□□□□ -0.07
CNOT3-210ENST00000618939 SLC9A9Q8IVB4 645 aa14.61□□□□□ -0.07
CNOT3-210ENST00000618939 MAP4K3Q8IVH8 894 aa14.61□□□□□ -0.07
CNOT3-210ENST00000618939 Q9H521 79 aa14.61□□□□□ -0.07
CNOT3-210ENST00000618939 M0R2N6 131 aa14.61□□□□□ -0.07
CNOT3-210ENST00000618939 ASAP2O43150 1006 aa14.61□□□□□ -0.07
CNOT3-210ENST00000618939 THOC5Q13769 683 aaKnown RBP14.61□□□□□ -0.07
CNOT3-210ENST00000618939 TATDN1Q6P1N9 297 aa14.61□□□□□ -0.07
CNOT3-210ENST00000618939 CYB5D1Q6P9G0 228 aa14.61□□□□□ -0.07
CNOT3-210ENST00000618939 PPIL6Q8IXY8 311 aa14.61□□□□□ -0.07
CNOT3-210ENST00000618939 NUDCD1Q96RS6 583 aa14.61□□□□□ -0.07
CNOT3-210ENST00000618939 GCOM2Q9BZD3 368 aaPredicted RBP14.61□□□□□ -0.07
CNOT3-210ENST00000618939 ZC3H7BQ9UGR2 993 aaKnown RBP14.61□□□□□ -0.07
CNOT3-210ENST00000618939 VAV3Q9UKW4 847 aa14.61□□□□□ -0.07
CNOT3-210ENST00000618939 RPS6KA5O75582 802 aa14.6□□□□□ -0.07
CNOT3-210ENST00000618939 METTL5Q9NRN9 209 aaKnown RBP14.6□□□□□ -0.07
CNOT3-210ENST00000618939 DDX20Q9UHI6 824 aaKnown RBP14.6□□□□□ -0.07
CNOT3-210ENST00000618939 IPO11Q9UI26 975 aaKnown RBP14.6□□□□□ -0.07
CNOT3-210ENST00000618939 SCOCQ9UIL1 159 aa14.6□□□□□ -0.07
CNOT3-210ENST00000618939 SALL4Q9UJQ4 1053 aa14.6□□□□□ -0.07
CNOT3-210ENST00000618939 SMAPO00193 183 aa14.6□□□□□ -0.07
CNOT3-210ENST00000618939 NOL3O60936 208 aaKnown RBP14.6□□□□□ -0.07
CNOT3-210ENST00000618939 ZNF200P98182 395 aaPredicted RBP14.6□□□□□ -0.07
CNOT3-210ENST00000618939 TWF2Q6IBS0 349 aaKnown RBP14.6□□□□□ -0.07
CNOT3-210ENST00000618939 LVRNQ6Q4G3 990 aa14.6□□□□□ -0.07
CNOT3-210ENST00000618939 ABRAQ8N0Z2 381 aa14.6□□□□□ -0.07
CNOT3-210ENST00000618939 SCFD2Q8WU76 684 aa14.6□□□□□ -0.07
CNOT3-210ENST00000618939 PRPF31Q8WWY3 499 aaKnown RBP14.6□□□□□ -0.07
CNOT3-210ENST00000618939 TSSK1BQ9BXA7 367 aa14.6□□□□□ -0.07
CNOT3-210ENST00000618939 NUF2Q9BZD4 464 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms