RNA–Protein interactions for RNA: ENST00000618836.4

UBE2D3-233, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-233ENST00000618836 ZMIZ2Q8NF64 920 aa4.35□□□□□ -1.71
UBE2D3-233ENST00000618836 MOSPD2Q8NHP6 518 aa4.35□□□□□ -1.71
UBE2D3-233ENST00000618836 SLC5A11Q8WWX8 675 aa4.35□□□□□ -1.71
UBE2D3-233ENST00000618836 KAT2BQ92831 832 aa4.35□□□□□ -1.71
UBE2D3-233ENST00000618836 SMARCE1Q969G3 411 aa4.35□□□□□ -1.71
UBE2D3-233ENST00000618836 TUBGCP3Q96CW5 907 aa4.35□□□□□ -1.71
UBE2D3-233ENST00000618836 SPATA17Q96L03 361 aa4.35□□□□□ -1.71
UBE2D3-233ENST00000618836 C7orf34Q96L11 122 aa4.35□□□□□ -1.71
UBE2D3-233ENST00000618836 RPRD1AQ96P16 312 aaPredicted RBP4.35□□□□□ -1.71
UBE2D3-233ENST00000618836 PRPF18Q99633 342 aaKnown RBP4.35□□□□□ -1.71
UBE2D3-233ENST00000618836 SMAD5Q99717 465 aaKnown RBP4.35□□□□□ -1.71
UBE2D3-233ENST00000618836 CIB1Q99828 191 aa4.35□□□□□ -1.71
UBE2D3-233ENST00000618836 FSD1Q9BTV5 496 aa4.35□□□□□ -1.71
UBE2D3-233ENST00000618836 BRIP1Q9BX63 1249 aa4.35□□□□□ -1.71
UBE2D3-233ENST00000618836 ZNF277Q9NRM2 450 aaPredicted RBP4.35□□□□□ -1.71
UBE2D3-233ENST00000618836 SLC7A8Q9UHI5 535 aa4.35□□□□□ -1.71
UBE2D3-233ENST00000618836 MYO6Q9UM54 1294 aa4.35□□□□□ -1.71
UBE2D3-233ENST00000618836 COL4A5P29400 1685 aa4.35□□□□□ -1.71
UBE2D3-233ENST00000618836 RRN3P2A6NIE6 340 aa4.34□□□□□ -1.71
UBE2D3-233ENST00000618836 LRRIQ4A6NIV6 560 aa4.34□□□□□ -1.71
UBE2D3-233ENST00000618836 PSMD14O00487 310 aa4.34□□□□□ -1.71
UBE2D3-233ENST00000618836 RIMBP2O15034 1052 aa4.34□□□□□ -1.71
UBE2D3-233ENST00000618836 SMPD2O60906 423 aa4.34□□□□□ -1.71
UBE2D3-233ENST00000618836 RB1P06400 928 aa4.34□□□□□ -1.71
UBE2D3-233ENST00000618836 TIMP2P16035 220 aa4.34□□□□□ -1.71
UBE2D3-233ENST00000618836 RXRAP19793 462 aa4.34□□□□□ -1.71
UBE2D3-233ENST00000618836 ATP4AP20648 1035 aa4.34□□□□□ -1.71
UBE2D3-233ENST00000618836 HNRNPH1P31943 449 aaKnown RBP4.34□□□□□ -1.71
UBE2D3-233ENST00000618836 YBEYP58557 167 aaPredicted RBP4.34□□□□□ -1.71
UBE2D3-233ENST00000618836 STK38Q15208 465 aa4.34□□□□□ -1.71
UBE2D3-233ENST00000618836 ZRSR1Q15695 479 aaKnown RBP4.34□□□□□ -1.71
UBE2D3-233ENST00000618836 DPYSL2Q16555 572 aa4.34□□□□□ -1.71
UBE2D3-233ENST00000618836 ATL3Q6DD88 541 aa4.34□□□□□ -1.71
UBE2D3-233ENST00000618836 BEND4Q6ZU67 534 aa4.34□□□□□ -1.71
UBE2D3-233ENST00000618836 ATCAYQ86WG3 371 aa4.34□□□□□ -1.71
UBE2D3-233ENST00000618836 TMTC1Q8IUR5 882 aa4.34□□□□□ -1.71
UBE2D3-233ENST00000618836 CCNJLQ8IV13 435 aa4.34□□□□□ -1.71
UBE2D3-233ENST00000618836 CNTROBQ8N137 903 aa4.34□□□□□ -1.71
UBE2D3-233ENST00000618836 RFWD2Q8NHY2 731 aa4.34□□□□□ -1.71
UBE2D3-233ENST00000618836 NR1H4Q96RI1 486 aaPredicted RBP4.34□□□□□ -1.71
UBE2D3-233ENST00000618836 MNTQ99583 582 aa4.34□□□□□ -1.71
UBE2D3-233ENST00000618836 MYD88Q99836 296 aa4.34□□□□□ -1.71
UBE2D3-233ENST00000618836 C9orf16Q9BUW7 83 aa4.34□□□□□ -1.71
UBE2D3-233ENST00000618836 PUS3Q9BZE2 481 aaKnown RBP4.34□□□□□ -1.71
UBE2D3-233ENST00000618836 MAN1C1Q9NR34 630 aa4.34□□□□□ -1.71
UBE2D3-233ENST00000618836 FARSBQ9NSD9 589 aaKnown RBP4.34□□□□□ -1.71
UBE2D3-233ENST00000618836 GDAP2Q9NXN4 497 aa4.34□□□□□ -1.71
UBE2D3-233ENST00000618836 CRNNQ9UBG3 495 aaPredicted RBP4.34□□□□□ -1.71
UBE2D3-233ENST00000618836 DPP7Q9UHL4 492 aa4.34□□□□□ -1.71
UBE2D3-233ENST00000618836 NUDCQ9Y266 331 aa4.34□□□□□ -1.71
UBE2D3-233ENST00000618836 DMRT1Q9Y5R6 373 aa4.34□□□□□ -1.71
UBE2D3-233ENST00000618836 COL4A3Q01955 1670 aa4.34□□□□□ -1.71
UBE2D3-233ENST00000618836 TTC21AQ8NDW8 1320 aa4.34□□□□□ -1.71
UBE2D3-233ENST00000618836 A0A0G2JS52 829 aa4.34□□□□□ -1.71
UBE2D3-233ENST00000618836 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.34□□□□□ -1.71
UBE2D3-233ENST00000618836 ERICH2A1L162 156 aa4.34□□□□□ -1.71
UBE2D3-233ENST00000618836 IRS4O14654 1257 aaPredicted RBP4.34□□□□□ -1.71
UBE2D3-233ENST00000618836 SMAD6O43541 496 aaKnown RBP4.34□□□□□ -1.71
UBE2D3-233ENST00000618836 SEC24DO94855 1032 aaPredicted RBP4.34□□□□□ -1.71
UBE2D3-233ENST00000618836 PAPLNO95428 1278 aa4.34□□□□□ -1.71
UBE2D3-233ENST00000618836 TBX18O95935 607 aa4.34□□□□□ -1.71
UBE2D3-233ENST00000618836 S100A9P06702 114 aaKnown RBP4.34□□□□□ -1.71
UBE2D3-233ENST00000618836 POU2F2P09086 479 aa4.34□□□□□ -1.71
UBE2D3-233ENST00000618836 PRKACBP22694 351 aa4.34□□□□□ -1.71
UBE2D3-233ENST00000618836 POU3F4P49335 361 aa4.34□□□□□ -1.71
UBE2D3-233ENST00000618836 EMP3P54852 163 aa4.34□□□□□ -1.71
UBE2D3-233ENST00000618836 VCPP55072 806 aaKnown RBP4.34□□□□□ -1.71
UBE2D3-233ENST00000618836 STARD6P59095 220 aa4.34□□□□□ -1.71
UBE2D3-233ENST00000618836 HTD2P86397 168 aa4.34□□□□□ -1.71
UBE2D3-233ENST00000618836 PRKCZQ05513 592 aa4.34□□□□□ -1.71
UBE2D3-233ENST00000618836 HNRNPDQ14103 355 aaKnown RBP4.34□□□□□ -1.71
UBE2D3-233ENST00000618836 DOC2AQ14183 400 aa4.34□□□□□ -1.71
UBE2D3-233ENST00000618836 SQLEQ14534 574 aa4.34□□□□□ -1.71
UBE2D3-233ENST00000618836 PFKFB3Q16875 520 aaPredicted RBP4.34□□□□□ -1.71
UBE2D3-233ENST00000618836 GPR139Q6DWJ6 353 aa4.34□□□□□ -1.71
UBE2D3-233ENST00000618836 FAM109BQ6ICB4 259 aaPredicted RBP4.34□□□□□ -1.71
UBE2D3-233ENST00000618836 TMEM154Q6P9G4 183 aa4.34□□□□□ -1.71
UBE2D3-233ENST00000618836 BRAPQ7Z569 592 aa4.34□□□□□ -1.71
UBE2D3-233ENST00000618836 DNAJB7Q7Z6W7 309 aaPredicted RBP4.34□□□□□ -1.71
UBE2D3-233ENST00000618836 AVL9Q8NBF6 648 aa4.34□□□□□ -1.71
UBE2D3-233ENST00000618836 FAM216AQ8WUB2 273 aa4.34□□□□□ -1.71
UBE2D3-233ENST00000618836 RAPGEF5Q92565 580 aa4.34□□□□□ -1.71
UBE2D3-233ENST00000618836 PPP1R10Q96QC0 940 aaKnown RBP4.34□□□□□ -1.71
UBE2D3-233ENST00000618836 UBXN6Q9BZV1 441 aa4.34□□□□□ -1.71
UBE2D3-233ENST00000618836 SRCIN1Q9C0H9 1055 aa4.34□□□□□ -1.71
UBE2D3-233ENST00000618836 UNC93B1Q9H1C4 597 aa4.34□□□□□ -1.71
UBE2D3-233ENST00000618836 VPS16Q9H269 839 aa4.34□□□□□ -1.71
UBE2D3-233ENST00000618836 RAD21L1Q9H4I0 556 aa4.34□□□□□ -1.71
UBE2D3-233ENST00000618836 TFB2MQ9H5Q4 396 aaKnown RBP4.34□□□□□ -1.71
UBE2D3-233ENST00000618836 LRRC19Q9H756 370 aa4.34□□□□□ -1.71
UBE2D3-233ENST00000618836 GORASP2Q9H8Y8 452 aa4.34□□□□□ -1.71
UBE2D3-233ENST00000618836 ANLNQ9NQW6 1124 aa4.34□□□□□ -1.71
UBE2D3-233ENST00000618836 POLE3Q9NRF9 147 aa4.34□□□□□ -1.71
UBE2D3-233ENST00000618836 TAS2R7Q9NYW3 318 aa4.34□□□□□ -1.71
UBE2D3-233ENST00000618836 FBXO40Q9UH90 709 aa4.34□□□□□ -1.71
UBE2D3-233ENST00000618836 TMCO1Q9UM00 188 aa4.34□□□□□ -1.71
UBE2D3-233ENST00000618836 MAPRE3Q9UPY8 281 aa4.34□□□□□ -1.71
UBE2D3-233ENST00000618836 R3HDM2Q9Y2K5 976 aaKnown RBP4.34□□□□□ -1.71
UBE2D3-233ENST00000618836 AKAP11Q9UKA4 1901 aa4.34□□□□□ -1.71
UBE2D3-233ENST00000618836 ANKRD30BQ9BXX2 1392 aa4.34□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms