RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 HPS4Q9NQG7 708 aa5.04□□□□□ -1.6
SNCA-213ENST00000618500 WRAP73Q9P2S5 460 aaPredicted RBP5.04□□□□□ -1.6
SNCA-213ENST00000618500 DDX25Q9UHL0 483 aaKnown RBP5.04□□□□□ -1.6
SNCA-213ENST00000618500 PILRBQ9UKJ0 227 aa5.04□□□□□ -1.6
SNCA-213ENST00000618500 TNFSF13BQ9Y275 285 aa5.04□□□□□ -1.6
SNCA-213ENST00000618500 RAI2Q9Y5P3 530 aa5.04□□□□□ -1.6
SNCA-213ENST00000618500 EML1O00423 815 aa5.03□□□□□ -1.6
SNCA-213ENST00000618500 NRG2O14511 850 aaPredicted RBP5.03□□□□□ -1.6
SNCA-213ENST00000618500 EPB41L2O43491 1005 aaKnown RBP5.03□□□□□ -1.6
SNCA-213ENST00000618500 EXTL3O43909 919 aa5.03□□□□□ -1.6
SNCA-213ENST00000618500 CDK4P11802 303 aa5.03□□□□□ -1.6
SNCA-213ENST00000618500 CDC27P30260 824 aa5.03□□□□□ -1.6
SNCA-213ENST00000618500 PDE6CP51160 858 aa5.03□□□□□ -1.6
SNCA-213ENST00000618500 EPHB3P54753 998 aa5.03□□□□□ -1.6
SNCA-213ENST00000618500 POU5F1Q01860 360 aaKnown RBP5.03□□□□□ -1.6
SNCA-213ENST00000618500 TWF1Q12792 350 aa5.03□□□□□ -1.6
SNCA-213ENST00000618500 GPR17Q13304 367 aa5.03□□□□□ -1.6
SNCA-213ENST00000618500 NPY5RQ15761 445 aa5.03□□□□□ -1.6
SNCA-213ENST00000618500 KYAT1Q16773 422 aa5.03□□□□□ -1.6
SNCA-213ENST00000618500 COL28A1Q2UY09 1125 aa5.03□□□□□ -1.6
SNCA-213ENST00000618500 DBX2Q6ZNG2 339 aa5.03□□□□□ -1.6
SNCA-213ENST00000618500 TMPRSS7Q7RTY8 843 aa5.03□□□□□ -1.6
SNCA-213ENST00000618500 OXER1Q8TDS5 423 aa5.03□□□□□ -1.6
SNCA-213ENST00000618500 TBCKQ8TEA7 893 aa5.03□□□□□ -1.6
SNCA-213ENST00000618500 LEO1Q8WVC0 666 aaPredicted RBP5.03□□□□□ -1.6
SNCA-213ENST00000618500 DDX12PQ92771 950 aa5.03□□□□□ -1.6
SNCA-213ENST00000618500 SPACA7Q96KW9 195 aa5.03□□□□□ -1.6
SNCA-213ENST00000618500 PAAF1Q9BRP4 392 aa5.03□□□□□ -1.6
SNCA-213ENST00000618500 ADPGKQ9BRR6 497 aa5.03□□□□□ -1.6
SNCA-213ENST00000618500 CCDC86Q9H6F5 360 aaKnown RBP5.03□□□□□ -1.6
SNCA-213ENST00000618500 TMEM134Q9H6X4 195 aa5.03□□□□□ -1.6
SNCA-213ENST00000618500 TUFT1Q9NNX1 390 aa5.03□□□□□ -1.6
SNCA-213ENST00000618500 TP53BP1Q12888 1972 aaPredicted RBP5.03□□□□□ -1.6
SNCA-213ENST00000618500 C1QL1O75973 258 aa5.03□□□□□ -1.6
SNCA-213ENST00000618500 NTRK1P04629 796 aa5.03□□□□□ -1.6
SNCA-213ENST00000618500 CYP11A1P05108 521 aa5.03□□□□□ -1.6
SNCA-213ENST00000618500 SRGAP2CP0DJJ0 459 aa5.03□□□□□ -1.6
SNCA-213ENST00000618500 MCF2P10911 925 aa5.03□□□□□ -1.6
SNCA-213ENST00000618500 AKAP5P24588 427 aa5.03□□□□□ -1.6
SNCA-213ENST00000618500 DGKEP52429 567 aa5.03□□□□□ -1.6
SNCA-213ENST00000618500 SCRN1Q12765 414 aa5.03□□□□□ -1.6
SNCA-213ENST00000618500 RUNX3Q13761 415 aa5.03□□□□□ -1.6
SNCA-213ENST00000618500 MAPK6Q16659 721 aa5.03□□□□□ -1.6
SNCA-213ENST00000618500 TRMT2BQ96GJ1 504 aaKnown RBP5.03□□□□□ -1.6
SNCA-213ENST00000618500 ZNF668Q96K58 619 aaPredicted RBP5.03□□□□□ -1.6
SNCA-213ENST00000618500 HSD17B14Q9BPX1 270 aa5.03□□□□□ -1.6
SNCA-213ENST00000618500 PLEKHA5Q9HAU0 1116 aa5.03□□□□□ -1.6
SNCA-213ENST00000618500 PTPRHQ9HD43 1115 aa5.03□□□□□ -1.6
SNCA-213ENST00000618500 TOPORSQ9NS56 1045 aaPredicted RBP5.03□□□□□ -1.6
SNCA-213ENST00000618500 C2orf42Q9NWW7 574 aa5.03□□□□□ -1.6
SNCA-213ENST00000618500 MMP17Q9ULZ9 603 aa5.03□□□□□ -1.6
SNCA-213ENST00000618500 SLC6A14Q9UN76 642 aa5.03□□□□□ -1.6
SNCA-213ENST00000618500 TCHHQ07283 1943 aa5.03□□□□□ -1.61
SNCA-213ENST00000618500 hCG_1642624A0A1W2PR95 340 aa5.02□□□□□ -1.61
SNCA-213ENST00000618500 CASTOR2A6NHX0 329 aa5.02□□□□□ -1.61
SNCA-213ENST00000618500 PODXLO00592 558 aa5.02□□□□□ -1.61
SNCA-213ENST00000618500 ADAMTS3O15072 1205 aa5.02□□□□□ -1.61
SNCA-213ENST00000618500 HYAL3O43820 417 aaPredicted RBP5.02□□□□□ -1.61
SNCA-213ENST00000618500 ALDH1A2O94788 518 aa5.02□□□□□ -1.61
SNCA-213ENST00000618500 CD59P13987 128 aa5.02□□□□□ -1.61
SNCA-213ENST00000618500 VIPR2P41587 438 aa5.02□□□□□ -1.61
SNCA-213ENST00000618500 CLCNKBP51801 687 aa5.02□□□□□ -1.61
SNCA-213ENST00000618500 SCAPQ12770 1279 aa5.02□□□□□ -1.61
SNCA-213ENST00000618500 DMC1Q14565 340 aa5.02□□□□□ -1.61
SNCA-213ENST00000618500 LPCAT2Q7L5N7 544 aa5.02□□□□□ -1.61
SNCA-213ENST00000618500 BLIDQ8IZY5 108 aa5.02□□□□□ -1.61
SNCA-213ENST00000618500 DEFB124Q8NES8 71 aa5.02□□□□□ -1.61
SNCA-213ENST00000618500 CD101Q93033 1021 aa5.02□□□□□ -1.61
SNCA-213ENST00000618500 POLR3FQ9H1D9 316 aaPredicted RBP5.02□□□□□ -1.61
SNCA-213ENST00000618500 IL21Q9HBE4 155 aa5.02□□□□□ -1.61
SNCA-213ENST00000618500 RBM12Q9NTZ6 932 aaKnown RBP5.02□□□□□ -1.61
SNCA-213ENST00000618500 PARP2Q9UGN5 583 aa5.02□□□□□ -1.61
SNCA-213ENST00000618500 HES2Q9Y543 173 aa5.02□□□□□ -1.61
SNCA-213ENST00000618500 GTF3C3Q9Y5Q9 886 aa5.02□□□□□ -1.61
SNCA-213ENST00000618500 THADAQ6YHU6 1953 aa5.02□□□□□ -1.61
SNCA-213ENST00000618500 FAM208BQ5VWN6 2430 aa5.02□□□□□ -1.61
SNCA-213ENST00000618500 CEP250Q9BV73 2442 aa5.02□□□□□ -1.61
SNCA-213ENST00000618500 TEX51A0A1B0GUA7 166 aa5.02□□□□□ -1.61
SNCA-213ENST00000618500 TMEM150BA6NC51 233 aa5.02□□□□□ -1.61
SNCA-213ENST00000618500 FAM205CA6NFA0 338 aa5.02□□□□□ -1.61
SNCA-213ENST00000618500 INO80B-WBP1J3KQ70 363 aa5.02□□□□□ -1.61
SNCA-213ENST00000618500 CHMP2AO43633 222 aa5.02□□□□□ -1.61
SNCA-213ENST00000618500 CBFA2T3O75081 653 aa5.02□□□□□ -1.61
SNCA-213ENST00000618500 NOL4O94818 638 aa5.02□□□□□ -1.61
SNCA-213ENST00000618500 EGFP01133 1207 aa5.02□□□□□ -1.61
SNCA-213ENST00000618500 RARRES1P49788 294 aa5.02□□□□□ -1.61
SNCA-213ENST00000618500 NPEPPSP55786 919 aa5.02□□□□□ -1.61
SNCA-213ENST00000618500 PRPF4BQ13523 1007 aaKnown RBP5.02□□□□□ -1.61
SNCA-213ENST00000618500 CCDC6Q16204 474 aa5.02□□□□□ -1.61
SNCA-213ENST00000618500 LONRF3Q496Y0 759 aa5.02□□□□□ -1.61
SNCA-213ENST00000618500 KCTD17Q8N5Z5 321 aa5.02□□□□□ -1.61
SNCA-213ENST00000618500 C3orf58Q8NDZ4 430 aa5.02□□□□□ -1.61
SNCA-213ENST00000618500 HAS1Q92839 578 aa5.02□□□□□ -1.61
SNCA-213ENST00000618500 ATP2A3Q93084 1043 aa5.02□□□□□ -1.61
SNCA-213ENST00000618500 ESYT1Q9BSJ8 1104 aa5.02□□□□□ -1.61
SNCA-213ENST00000618500 TIPINQ9BVW5 301 aa5.02□□□□□ -1.61
SNCA-213ENST00000618500 CCSER1Q9C0I3 900 aa5.02□□□□□ -1.61
SNCA-213ENST00000618500 PCED1AQ9H1Q7 454 aa5.02□□□□□ -1.61
SNCA-213ENST00000618500 CYP4F11Q9HBI6 524 aa5.02□□□□□ -1.61
SNCA-213ENST00000618500 POLIQ9UNA4 740 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms