RNA–Protein interactions for RNA: ENST00000618327.4

CIITA-213, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CIITA, Length 4,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-213ENST00000618327 BTBD7Q9P203 1132 aa14.64□□□□□ -0.07
CIITA-213ENST00000618327 POLIQ9UNA4 740 aa14.64□□□□□ -0.07
CIITA-213ENST00000618327 SIK3Q9Y2K2 1263 aa14.64□□□□□ -0.07
CIITA-213ENST00000618327 BTBD19C9JJ37 291 aa14.64□□□□□ -0.07
CIITA-213ENST00000618327 GIPC1O14908 333 aa14.64□□□□□ -0.07
CIITA-213ENST00000618327 MAFO75444 373 aaPredicted RBP14.64□□□□□ -0.07
CIITA-213ENST00000618327 SLC20A1Q8WUM9 679 aa14.64□□□□□ -0.07
CIITA-213ENST00000618327 XPNPEP3Q9NQH7 507 aa14.64□□□□□ -0.07
CIITA-213ENST00000618327 LRRIQ3A6PVS8 624 aaPredicted RBP14.64□□□□□ -0.07
CIITA-213ENST00000618327 H3BRJ5 948 aa14.64□□□□□ -0.07
CIITA-213ENST00000618327 UPP2O95045 317 aa14.64□□□□□ -0.07
CIITA-213ENST00000618327 FGFR4P22455 802 aa14.64□□□□□ -0.07
CIITA-213ENST00000618327 ACADSBP45954 432 aa14.64□□□□□ -0.07
CIITA-213ENST00000618327 GPS1Q13098 491 aa14.64□□□□□ -0.07
CIITA-213ENST00000618327 KIAA1755Q5JYT7 1200 aa14.64□□□□□ -0.07
CIITA-213ENST00000618327 PRAMEF19Q5SWL8 479 aa14.64□□□□□ -0.07
CIITA-213ENST00000618327 TTC19Q6DKK2 380 aaPredicted RBP14.64□□□□□ -0.07
CIITA-213ENST00000618327 ATL2Q8NHH9 583 aa14.64□□□□□ -0.07
CIITA-213ENST00000618327 MAF1Q9H063 256 aa14.64□□□□□ -0.07
CIITA-213ENST00000618327 RBM12Q9NTZ6 932 aaKnown RBP14.64□□□□□ -0.07
CIITA-213ENST00000618327 NOVA2Q9UNW9 492 aaKnown RBP14.64□□□□□ -0.07
CIITA-213ENST00000618327 HOXC6P09630 235 aa14.63□□□□□ -0.07
CIITA-213ENST00000618327 OR1G1P47890 313 aa14.63□□□□□ -0.07
CIITA-213ENST00000618327 ADCY1Q08828 1119 aa14.63□□□□□ -0.07
CIITA-213ENST00000618327 ORC1Q13415 861 aa14.63□□□□□ -0.07
CIITA-213ENST00000618327 MAP7Q14244 749 aa14.63□□□□□ -0.07
CIITA-213ENST00000618327 AMHR2Q16671 573 aa14.63□□□□□ -0.07
CIITA-213ENST00000618327 CYP4A22Q5TCH4 519 aa14.63□□□□□ -0.07
CIITA-213ENST00000618327 TRIM68Q6AZZ1 485 aa14.63□□□□□ -0.07
CIITA-213ENST00000618327 RNF168Q8IYW5 571 aaPredicted RBP14.63□□□□□ -0.07
CIITA-213ENST00000618327 SIK2Q9H0K1 926 aa14.63□□□□□ -0.07
CIITA-213ENST00000618327 KCTD10Q9H3F6 313 aa14.63□□□□□ -0.07
CIITA-213ENST00000618327 PEX10O60683 326 aa14.63□□□□□ -0.07
CIITA-213ENST00000618327 FARP2O94887 1054 aaPredicted RBP14.63□□□□□ -0.07
CIITA-213ENST00000618327 MOCS2O96007 188 aaPredicted RBP14.63□□□□□ -0.07
CIITA-213ENST00000618327 ZFXP17010 805 aaPredicted RBP14.63□□□□□ -0.07
CIITA-213ENST00000618327 IFNAR2P48551 515 aa14.63□□□□□ -0.07
CIITA-213ENST00000618327 COG7P83436 770 aa14.63□□□□□ -0.07
CIITA-213ENST00000618327 BEX3Q00994 111 aa14.63□□□□□ -0.07
CIITA-213ENST00000618327 ROR1Q01973 937 aa14.63□□□□□ -0.07
CIITA-213ENST00000618327 MIIPQ5JXC2 388 aa14.63□□□□□ -0.07
CIITA-213ENST00000618327 HEATR6Q6AI08 1181 aaKnown RBP14.63□□□□□ -0.07
CIITA-213ENST00000618327 COG1Q8WTW3 980 aa14.63□□□□□ -0.07
CIITA-213ENST00000618327 CCT6BQ92526 530 aa14.63□□□□□ -0.07
CIITA-213ENST00000618327 CCDC68Q9H2F9 335 aa14.63□□□□□ -0.07
CIITA-213ENST00000618327 KIAA1257Q9ULG3 409 aa14.63□□□□□ -0.07
CIITA-213ENST00000618327 RRP15Q9Y3B9 282 aaKnown RBP14.63□□□□□ -0.07
CIITA-213ENST00000618327 PFDN6O15212 129 aa14.63□□□□□ -0.07
CIITA-213ENST00000618327 ATICP31939 592 aa14.63□□□□□ -0.07
CIITA-213ENST00000618327 SULT1E1P49888 294 aa14.63□□□□□ -0.07
CIITA-213ENST00000618327 SH3BGRP55822 239 aaPredicted RBP14.63□□□□□ -0.07
CIITA-213ENST00000618327 ADCY2Q08462 1091 aa14.63□□□□□ -0.07
CIITA-213ENST00000618327 BMT2Q1RMZ1 405 aa14.63□□□□□ -0.07
CIITA-213ENST00000618327 GJC2Q5T442 439 aaPredicted RBP14.63□□□□□ -0.07
CIITA-213ENST00000618327 C6orf118Q5T5N4 469 aa14.63□□□□□ -0.07
CIITA-213ENST00000618327 ABHD15Q6UXT9 468 aa14.63□□□□□ -0.07
CIITA-213ENST00000618327 ANKRD23Q86SG2 305 aa14.63□□□□□ -0.07
CIITA-213ENST00000618327 ARHGEF19Q8IW93 802 aa14.63□□□□□ -0.07
CIITA-213ENST00000618327 ASB7Q9H672 318 aa14.63□□□□□ -0.07
CIITA-213ENST00000618327 SNTG2Q9NY99 539 aa14.63□□□□□ -0.07
CIITA-213ENST00000618327 CNTNAP1P78357 1384 aa14.63□□□□□ -0.07
CIITA-213ENST00000618327 TRPA1O75762 1119 aa14.63□□□□□ -0.07
CIITA-213ENST00000618327 B3GAT3O94766 335 aa14.63□□□□□ -0.07
CIITA-213ENST00000618327 TROVE2P10155 538 aaKnown RBP eCLIP14.63□□□□□ -0.07
CIITA-213ENST00000618327 GCNT1Q02742 428 aa14.63□□□□□ -0.07
CIITA-213ENST00000618327 FAM110CQ1W6H9 321 aa14.63□□□□□ -0.07
CIITA-213ENST00000618327 SLC27A1Q6PCB7 646 aa14.63□□□□□ -0.07
CIITA-213ENST00000618327 C1orf228Q6PIY5 440 aa14.63□□□□□ -0.07
CIITA-213ENST00000618327 SIAH1Q8IUQ4 282 aa14.63□□□□□ -0.07
CIITA-213ENST00000618327 AFAP1L2Q8N4X5 818 aa14.63□□□□□ -0.07
CIITA-213ENST00000618327 CFAP36Q96G28 342 aa14.63□□□□□ -0.07
CIITA-213ENST00000618327 STARD7Q9NQZ5 370 aa14.63□□□□□ -0.07
CIITA-213ENST00000618327 MYH2Q9UKX2 1941 aa14.63□□□□□ -0.07
CIITA-213ENST00000618327 A0A0G2JLL6 359 aaPredicted RBP14.62□□□□□ -0.07
CIITA-213ENST00000618327 VDRP11473 427 aa14.62□□□□□ -0.07
CIITA-213ENST00000618327 KRT17Q04695 432 aa14.62□□□□□ -0.07
CIITA-213ENST00000618327 PDE1CQ14123 709 aaPredicted RBP14.62□□□□□ -0.07
CIITA-213ENST00000618327 C2CD6Q53TS8 623 aa14.62□□□□□ -0.07
CIITA-213ENST00000618327 FOXR2Q6PJQ5 311 aa14.62□□□□□ -0.07
CIITA-213ENST00000618327 DLK2Q6UY11 383 aa14.62□□□□□ -0.07
CIITA-213ENST00000618327 PRRT2Q7Z6L0 340 aaPredicted RBP14.62□□□□□ -0.07
CIITA-213ENST00000618327 ZC3H18Q86VM9 953 aaKnown RBP14.62□□□□□ -0.07
CIITA-213ENST00000618327 SLC9A9Q8IVB4 645 aa14.62□□□□□ -0.07
CIITA-213ENST00000618327 CYFIP2Q96F07 1278 aa14.62□□□□□ -0.07
CIITA-213ENST00000618327 SNF8Q96H20 258 aa14.62□□□□□ -0.07
CIITA-213ENST00000618327 ZNF214Q9UL59 606 aaPredicted RBP14.62□□□□□ -0.07
CIITA-213ENST00000618327 USH1CQ9Y6N9 552 aa14.62□□□□□ -0.07
CIITA-213ENST00000618327 GOLGA8MH3BSY2 632 aa14.62□□□□□ -0.07
CIITA-213ENST00000618327 M0R2N6 131 aa14.62□□□□□ -0.07
CIITA-213ENST00000618327 PHF2O75151 1096 aa14.62□□□□□ -0.07
CIITA-213ENST00000618327 OSBPL8Q9BZF1 889 aa14.62□□□□□ -0.07
CIITA-213ENST00000618327 CARD9Q9H257 536 aa14.62□□□□□ -0.07
CIITA-213ENST00000618327 CYP3A43Q9HB55 503 aa14.62□□□□□ -0.07
CIITA-213ENST00000618327 APOL1O14791 398 aa14.62□□□□□ -0.07
CIITA-213ENST00000618327 TTI1O43156 1089 aa14.62□□□□□ -0.07
CIITA-213ENST00000618327 PPP3CAQ08209 521 aa14.62□□□□□ -0.07
CIITA-213ENST00000618327 ACOT1Q86TX2 421 aa14.62□□□□□ -0.07
CIITA-213ENST00000618327 RPAINQ86UA6 219 aa14.62□□□□□ -0.07
CIITA-213ENST00000618327 CDKL3Q8IVW4 592 aaPredicted RBP14.62□□□□□ -0.07
CIITA-213ENST00000618327 USP38Q8NB14 1042 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms