RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 ZNF697Q5TEC3 545 aa16.75■□□□□ 0.27
PCDHGC3-204ENST00000617222 KIAA1841Q6NSI8 718 aa16.75■□□□□ 0.27
PCDHGC3-204ENST00000617222 SCARA5Q6ZMJ2 495 aa16.75■□□□□ 0.27
PCDHGC3-204ENST00000617222 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.75■□□□□ 0.27
PCDHGC3-204ENST00000617222 TMC7Q7Z402 723 aa16.75■□□□□ 0.27
PCDHGC3-204ENST00000617222 TOP6BLQ8N6T0 577 aa16.75■□□□□ 0.27
PCDHGC3-204ENST00000617222 APPL2Q8NEU8 664 aa16.75■□□□□ 0.27
PCDHGC3-204ENST00000617222 MICAL1Q8TDZ2 1067 aa16.75■□□□□ 0.27
PCDHGC3-204ENST00000617222 GDPD5Q8WTR4 605 aa16.75■□□□□ 0.27
PCDHGC3-204ENST00000617222 RIN2Q8WYP3 895 aaPredicted RBP16.75■□□□□ 0.27
PCDHGC3-204ENST00000617222 CHST7Q9NS84 486 aa16.75■□□□□ 0.27
PCDHGC3-204ENST00000617222 STK39Q9UEW8 545 aa16.75■□□□□ 0.27
PCDHGC3-204ENST00000617222 L1RE1Q9UN81 338 aa16.75■□□□□ 0.27
PCDHGC3-204ENST00000617222 ARHGEF37A1IGU5 675 aa16.74■□□□□ 0.27
PCDHGC3-204ENST00000617222 C2CD2LO14523 706 aa16.74■□□□□ 0.27
PCDHGC3-204ENST00000617222 CXCL14O95715 111 aa16.74■□□□□ 0.27
PCDHGC3-204ENST00000617222 WEE2P0C1S8 567 aa16.74■□□□□ 0.27
PCDHGC3-204ENST00000617222 CTSAP10619 480 aa16.74■□□□□ 0.27
PCDHGC3-204ENST00000617222 TYMPP19971 482 aa16.74■□□□□ 0.27
PCDHGC3-204ENST00000617222 CDH8P55286 799 aa16.74■□□□□ 0.27
PCDHGC3-204ENST00000617222 APBA1Q02410 837 aa16.74■□□□□ 0.27
PCDHGC3-204ENST00000617222 DSG1Q02413 1049 aa16.74■□□□□ 0.27
PCDHGC3-204ENST00000617222 GRIN2CQ14957 1233 aa16.74■□□□□ 0.27
PCDHGC3-204ENST00000617222 SYCP1Q15431 976 aa16.74■□□□□ 0.27
PCDHGC3-204ENST00000617222 PTPN21Q16825 1174 aa16.74■□□□□ 0.27
PCDHGC3-204ENST00000617222 TRIM65Q6PJ69 517 aa16.74■□□□□ 0.27
PCDHGC3-204ENST00000617222 DPH6Q7L8W6 267 aa16.74■□□□□ 0.27
PCDHGC3-204ENST00000617222 METTL23Q86XA0 190 aa16.74■□□□□ 0.27
PCDHGC3-204ENST00000617222 PDCL2Q8N4E4 241 aa16.74■□□□□ 0.27
PCDHGC3-204ENST00000617222 AUTS2Q8WXX7 1259 aa16.74■□□□□ 0.27
PCDHGC3-204ENST00000617222 FAM161BQ96MY7 647 aa16.74■□□□□ 0.27
PCDHGC3-204ENST00000617222 MRPL45Q9BRJ2 306 aaKnown RBP16.74■□□□□ 0.27
PCDHGC3-204ENST00000617222 LSM14BQ9BX40 385 aaKnown RBP16.74■□□□□ 0.27
PCDHGC3-204ENST00000617222 NIF3L1Q9GZT8 377 aa16.74■□□□□ 0.27
PCDHGC3-204ENST00000617222 ZBP1Q9H171 429 aa16.74■□□□□ 0.27
PCDHGC3-204ENST00000617222 SDCBP2Q9H190 292 aa16.74■□□□□ 0.27
PCDHGC3-204ENST00000617222 PRDM12Q9H4Q4 367 aa16.74■□□□□ 0.27
PCDHGC3-204ENST00000617222 SMYD3Q9H7B4 428 aa16.74■□□□□ 0.27
PCDHGC3-204ENST00000617222 TLR9Q9NR96 1032 aa16.74■□□□□ 0.27
PCDHGC3-204ENST00000617222 SCN1AP35498 2009 aa16.74■□□□□ 0.27
PCDHGC3-204ENST00000617222 LPXNO60711 386 aa16.73■□□□□ 0.27
PCDHGC3-204ENST00000617222 CYP11A1P05108 521 aa16.73■□□□□ 0.27
PCDHGC3-204ENST00000617222 URODP06132 367 aa16.73■□□□□ 0.27
PCDHGC3-204ENST00000617222 CA8P35219 290 aa16.73■□□□□ 0.27
PCDHGC3-204ENST00000617222 ASPAP45381 313 aa16.73■□□□□ 0.27
PCDHGC3-204ENST00000617222 RAP1GAPP47736 663 aa16.73■□□□□ 0.27
PCDHGC3-204ENST00000617222 GLUD2P49448 558 aa16.73■□□□□ 0.27
PCDHGC3-204ENST00000617222 KLK7P49862 253 aa16.73■□□□□ 0.27
PCDHGC3-204ENST00000617222 CAMK1Q14012 370 aa16.73■□□□□ 0.27
PCDHGC3-204ENST00000617222 BMS1Q14692 1282 aaKnown RBP16.73■□□□□ 0.27
PCDHGC3-204ENST00000617222 UVSSAQ2YD98 709 aa16.73■□□□□ 0.27
PCDHGC3-204ENST00000617222 VARS2Q5ST30 1063 aaKnown RBP16.73■□□□□ 0.27
PCDHGC3-204ENST00000617222 KIAA0319Q5VV43 1072 aa16.73■□□□□ 0.27
PCDHGC3-204ENST00000617222 PHLDB3Q6NSJ2 640 aa16.73■□□□□ 0.27
PCDHGC3-204ENST00000617222 GJB7Q6PEY0 223 aa16.73■□□□□ 0.27
PCDHGC3-204ENST00000617222 PRSS55Q6UWB4 352 aaPredicted RBP16.73■□□□□ 0.27
PCDHGC3-204ENST00000617222 RRAGAQ7L523 313 aa16.73■□□□□ 0.27
PCDHGC3-204ENST00000617222 LIMS2Q7Z4I7 341 aa16.73■□□□□ 0.27
PCDHGC3-204ENST00000617222 OSTM1Q86WC4 334 aa16.73■□□□□ 0.27
PCDHGC3-204ENST00000617222 ARHGEF19Q8IW93 802 aa16.73■□□□□ 0.27
PCDHGC3-204ENST00000617222 PPM1KQ8N3J5 372 aa16.73■□□□□ 0.27
PCDHGC3-204ENST00000617222 PCMTD1Q96MG8 357 aaPredicted RBP16.73■□□□□ 0.27
PCDHGC3-204ENST00000617222 ERGIC2Q96RQ1 377 aa16.73■□□□□ 0.27
PCDHGC3-204ENST00000617222 TCF25Q9BQ70 676 aa16.73■□□□□ 0.27
PCDHGC3-204ENST00000617222 XPO4Q9C0E2 1151 aaKnown RBP16.73■□□□□ 0.27
PCDHGC3-204ENST00000617222 LMAN2LQ9H0V9 348 aa16.73■□□□□ 0.27
PCDHGC3-204ENST00000617222 SIX2Q9NPC8 291 aa16.73■□□□□ 0.27
PCDHGC3-204ENST00000617222 UBE2TQ9NPD8 197 aaPredicted RBP16.73■□□□□ 0.27
PCDHGC3-204ENST00000617222 ENTPD7Q9NQZ7 604 aa16.73■□□□□ 0.27
PCDHGC3-204ENST00000617222 MRPL17Q9NRX2 175 aaKnown RBP16.73■□□□□ 0.27
PCDHGC3-204ENST00000617222 DSEQ9UL01 958 aa16.73■□□□□ 0.27
PCDHGC3-204ENST00000617222 AP5Z1O43299 807 aa16.72■□□□□ 0.27
PCDHGC3-204ENST00000617222 CBFA2T2O43439 604 aa16.72■□□□□ 0.27
PCDHGC3-204ENST00000617222 TACC1O75410 805 aa16.72■□□□□ 0.27
PCDHGC3-204ENST00000617222 FAM163BP0C2L3 166 aa16.72■□□□□ 0.27
PCDHGC3-204ENST00000617222 IRS1P35568 1242 aa16.72■□□□□ 0.27
PCDHGC3-204ENST00000617222 YWHAHQ04917 246 aaPredicted RBP16.72■□□□□ 0.27
PCDHGC3-204ENST00000617222 CUL2Q13617 745 aa16.72■□□□□ 0.27
PCDHGC3-204ENST00000617222 MRPL58Q14197 206 aaKnown RBP16.72■□□□□ 0.27
PCDHGC3-204ENST00000617222 PLPP4Q5VZY2 271 aa16.72■□□□□ 0.27
PCDHGC3-204ENST00000617222 OVOS1Q6IE37 1185 aa16.72■□□□□ 0.27
PCDHGC3-204ENST00000617222 DPY19L2P1Q6NXN4 242 aa16.72■□□□□ 0.27
PCDHGC3-204ENST00000617222 ADGRF2Q8IZF7 708 aa16.72■□□□□ 0.27
PCDHGC3-204ENST00000617222 TMEM86AQ8N2M4 240 aa16.72■□□□□ 0.27
PCDHGC3-204ENST00000617222 LNX1Q8TBB1 728 aaPredicted RBP16.72■□□□□ 0.27
PCDHGC3-204ENST00000617222 PIK3R5Q8WYR1 880 aa16.72■□□□□ 0.27
PCDHGC3-204ENST00000617222 KAT5Q92993 513 aa16.72■□□□□ 0.27
PCDHGC3-204ENST00000617222 FAXDC2Q96IV6 333 aa16.72■□□□□ 0.27
PCDHGC3-204ENST00000617222 BCO2Q9BYV7 579 aa16.72■□□□□ 0.27
PCDHGC3-204ENST00000617222 CYP3A43Q9HB55 503 aa16.72■□□□□ 0.27
PCDHGC3-204ENST00000617222 NGRNQ9NPE2 291 aaKnown RBP16.72■□□□□ 0.27
PCDHGC3-204ENST00000617222 SSX2IPQ9Y2D8 614 aa16.72■□□□□ 0.27
PCDHGC3-204ENST00000617222 SIK3Q9Y2K2 1263 aa16.72■□□□□ 0.27
PCDHGC3-204ENST00000617222 PCDHGC5Q9Y5F6 944 aa16.72■□□□□ 0.27
PCDHGC3-204ENST00000617222 KIAA1671Q9BY89 1806 aa16.72■□□□□ 0.27
PCDHGC3-204ENST00000617222 H7C4K7 107 aa16.71■□□□□ 0.27
PCDHGC3-204ENST00000617222 FSCN2O14926 492 aa16.71■□□□□ 0.27
PCDHGC3-204ENST00000617222 LILRB3O75022 631 aa16.71■□□□□ 0.27
PCDHGC3-204ENST00000617222 OAZ2O95190 189 aa16.71■□□□□ 0.27
PCDHGC3-204ENST00000617222 WARSP23381 471 aaKnown RBP16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms