RNA–Protein interactions for RNA: ENST00000616887.1

PCDHGA9-202, Transcript of protocadherin gamma subfamily A, 9, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA9, Length 2,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9-202ENST00000616887 BLMHQ13867 455 aa12.14□□□□□ -0.47
PCDHGA9-202ENST00000616887 CWF19L1Q69YN2 538 aaKnown RBP12.14□□□□□ -0.47
PCDHGA9-202ENST00000616887 CCDC62Q6P9F0 684 aa12.14□□□□□ -0.47
PCDHGA9-202ENST00000616887 ZDHHC14Q8IZN3 488 aa12.14□□□□□ -0.47
PCDHGA9-202ENST00000616887 RASGEF1CQ8N431 466 aa12.14□□□□□ -0.47
PCDHGA9-202ENST00000616887 ZCWPW1Q9H0M4 648 aa12.14□□□□□ -0.47
PCDHGA9-202ENST00000616887 RNPEPQ9H4A4 650 aa12.14□□□□□ -0.47
PCDHGA9-202ENST00000616887 MINDY3Q9H8M7 445 aa12.14□□□□□ -0.47
PCDHGA9-202ENST00000616887 G3BP2Q9UN86 482 aaKnown RBP12.14□□□□□ -0.47
PCDHGA9-202ENST00000616887 NUB1Q9Y5A7 615 aa12.14□□□□□ -0.47
PCDHGA9-202ENST00000616887 CCT8L1PA6NM43 557 aa12.13□□□□□ -0.47
PCDHGA9-202ENST00000616887 FAM189A1O60320 539 aa12.13□□□□□ -0.47
PCDHGA9-202ENST00000616887 CELF2O95319 508 aaKnown RBP12.13□□□□□ -0.47
PCDHGA9-202ENST00000616887 SLC25A27O95847 323 aa12.13□□□□□ -0.47
PCDHGA9-202ENST00000616887 CST3P01034 146 aaPredicted RBP12.13□□□□□ -0.47
PCDHGA9-202ENST00000616887 IQCF3P0C7M6 154 aa12.13□□□□□ -0.47
PCDHGA9-202ENST00000616887 GNAT1P11488 350 aa12.13□□□□□ -0.47
PCDHGA9-202ENST00000616887 OSBPP22059 807 aa12.13□□□□□ -0.47
PCDHGA9-202ENST00000616887 GTF2H1P32780 548 aa12.13□□□□□ -0.47
PCDHGA9-202ENST00000616887 RFC5P40937 340 aa12.13□□□□□ -0.47
PCDHGA9-202ENST00000616887 TNNC1P63316 161 aa12.13□□□□□ -0.47
PCDHGA9-202ENST00000616887 CLDN10P78369 228 aa12.13□□□□□ -0.47
PCDHGA9-202ENST00000616887 LAMB3Q13751 1172 aa12.13□□□□□ -0.47
PCDHGA9-202ENST00000616887 ZNF564Q8TBZ8 553 aaPredicted RBP12.13□□□□□ -0.47
PCDHGA9-202ENST00000616887 CCHCR1Q8TD31 782 aa12.13□□□□□ -0.47
PCDHGA9-202ENST00000616887 GTF3C2Q8WUA4 911 aaPredicted RBP12.13□□□□□ -0.47
PCDHGA9-202ENST00000616887 P3H4Q92791 437 aa12.13□□□□□ -0.47
PCDHGA9-202ENST00000616887 SLC10A4Q96EP9 437 aa12.13□□□□□ -0.47
PCDHGA9-202ENST00000616887 TSC22D3Q99576 134 aa12.13□□□□□ -0.47
PCDHGA9-202ENST00000616887 TRIM51Q9BSJ1 452 aa12.13□□□□□ -0.47
PCDHGA9-202ENST00000616887 TRIM31Q9BZY9 425 aa12.13□□□□□ -0.47
PCDHGA9-202ENST00000616887 MTMR12Q9C0I1 747 aa12.13□□□□□ -0.47
PCDHGA9-202ENST00000616887 CNOT8Q9UFF9 292 aaKnown RBP12.13□□□□□ -0.47
PCDHGA9-202ENST00000616887 TRPM7Q96QT4 1865 aa12.13□□□□□ -0.47
PCDHGA9-202ENST00000616887 TCRBV7S2A1N4TA0A589 114 aa12.13□□□□□ -0.47
PCDHGA9-202ENST00000616887 CLDN3O15551 220 aa12.13□□□□□ -0.47
PCDHGA9-202ENST00000616887 SMIM24O75264 130 aa12.13□□□□□ -0.47
PCDHGA9-202ENST00000616887 GJB6O95452 261 aa12.13□□□□□ -0.47
PCDHGA9-202ENST00000616887 PIGRP01833 764 aa12.13□□□□□ -0.47
PCDHGA9-202ENST00000616887 ABL2P42684 1182 aa12.13□□□□□ -0.47
PCDHGA9-202ENST00000616887 GCNT1Q02742 428 aa12.13□□□□□ -0.47
PCDHGA9-202ENST00000616887 SNAPC2Q13487 334 aa12.13□□□□□ -0.47
PCDHGA9-202ENST00000616887 RIPK1Q13546 671 aa12.13□□□□□ -0.47
PCDHGA9-202ENST00000616887 SLMAPQ14BN4 828 aa12.13□□□□□ -0.47
PCDHGA9-202ENST00000616887 TMEM270Q6UE05 265 aa12.13□□□□□ -0.47
PCDHGA9-202ENST00000616887 ARMCX2Q7L311 632 aa12.13□□□□□ -0.47
PCDHGA9-202ENST00000616887 USP37Q86T82 979 aa12.13□□□□□ -0.47
PCDHGA9-202ENST00000616887 TRIM74Q86UV6 250 aa12.13□□□□□ -0.47
PCDHGA9-202ENST00000616887 TRIM73Q86UV7 250 aa12.13□□□□□ -0.47
PCDHGA9-202ENST00000616887 RHOT2Q8IXI1 618 aa12.13□□□□□ -0.47
PCDHGA9-202ENST00000616887 TMEM192Q8IY95 271 aa12.13□□□□□ -0.47
PCDHGA9-202ENST00000616887 MREGQ8N565 214 aa12.13□□□□□ -0.47
PCDHGA9-202ENST00000616887 ZNF513Q8N8E2 541 aaPredicted RBP12.13□□□□□ -0.47
PCDHGA9-202ENST00000616887 PAIP2Q9BPZ3 127 aaKnown RBP12.13□□□□□ -0.47
PCDHGA9-202ENST00000616887 CCDC113Q9H0I3 377 aa12.13□□□□□ -0.47
PCDHGA9-202ENST00000616887 A6NHS1 94 aa12.12□□□□□ -0.47
PCDHGA9-202ENST00000616887 H0YCG3 227 aa12.12□□□□□ -0.47
PCDHGA9-202ENST00000616887 CES2O00748 559 aa12.12□□□□□ -0.47
PCDHGA9-202ENST00000616887 ZNF286BP0CG31 522 aa12.12□□□□□ -0.47
PCDHGA9-202ENST00000616887 ACO1P21399 889 aaKnown RBP12.12□□□□□ -0.47
PCDHGA9-202ENST00000616887 FLT3P36888 993 aa12.12□□□□□ -0.47
PCDHGA9-202ENST00000616887 CTCFP49711 727 aaPredicted RBP12.12□□□□□ -0.47
PCDHGA9-202ENST00000616887 NOP14P78316 857 aaKnown RBP12.12□□□□□ -0.47
PCDHGA9-202ENST00000616887 FAM133BQ5BKY9 247 aaKnown RBP12.12□□□□□ -0.47
PCDHGA9-202ENST00000616887 CST9Q5W186 159 aa12.12□□□□□ -0.47
PCDHGA9-202ENST00000616887 EEF1DP3Q658K8 133 aa12.12□□□□□ -0.47
PCDHGA9-202ENST00000616887 THNSL1Q8IYQ7 743 aa12.12□□□□□ -0.47
PCDHGA9-202ENST00000616887 KLHL23Q8NBE8 558 aa12.12□□□□□ -0.47
PCDHGA9-202ENST00000616887 C1orf131Q8NDD1 294 aaKnown RBP12.12□□□□□ -0.47
PCDHGA9-202ENST00000616887 ATP8B4Q8TF62 1192 aa12.12□□□□□ -0.47
PCDHGA9-202ENST00000616887 EZH1Q92800 747 aaPredicted RBP12.12□□□□□ -0.47
PCDHGA9-202ENST00000616887 ZFATQ9P243 1243 aa12.12□□□□□ -0.47
PCDHGA9-202ENST00000616887 DAAM1Q9Y4D1 1078 aa12.12□□□□□ -0.47
PCDHGA9-202ENST00000616887 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.12□□□□□ -0.47
PCDHGA9-202ENST00000616887 PRKCBP05771 671 aa12.12□□□□□ -0.47
PCDHGA9-202ENST00000616887 DRD4P21917 467 aa12.12□□□□□ -0.47
PCDHGA9-202ENST00000616887 RRM1P23921 792 aa12.12□□□□□ -0.47
PCDHGA9-202ENST00000616887 HLTFQ14527 1009 aaKnown RBP eCLIP12.12□□□□□ -0.47
PCDHGA9-202ENST00000616887 ZNF394Q53GI3 561 aa12.12□□□□□ -0.47
PCDHGA9-202ENST00000616887 MFN1Q8IWA4 741 aa12.12□□□□□ -0.47
PCDHGA9-202ENST00000616887 PRCCQ92733 491 aaPredicted RBP12.12□□□□□ -0.47
PCDHGA9-202ENST00000616887 OSBPL1AQ9BXW6 950 aa12.12□□□□□ -0.47
PCDHGA9-202ENST00000616887 DPH5Q9H2P9 285 aa12.12□□□□□ -0.47
PCDHGA9-202ENST00000616887 PNMA3Q9UL41 463 aa12.12□□□□□ -0.47
PCDHGA9-202ENST00000616887 INO80B-WBP1J3KQ70 363 aa12.11□□□□□ -0.47
PCDHGA9-202ENST00000616887 O00370 1275 aa12.11□□□□□ -0.47
PCDHGA9-202ENST00000616887 ABLIM1O14639 778 aa12.11□□□□□ -0.47
PCDHGA9-202ENST00000616887 DAPK3O43293 454 aa12.11□□□□□ -0.47
PCDHGA9-202ENST00000616887 LGR5O75473 907 aa12.11□□□□□ -0.47
PCDHGA9-202ENST00000616887 PYGMP11217 842 aa12.11□□□□□ -0.47
PCDHGA9-202ENST00000616887 GZMAP12544 262 aa12.11□□□□□ -0.47
PCDHGA9-202ENST00000616887 ADORA2AP29274 412 aa12.11□□□□□ -0.47
PCDHGA9-202ENST00000616887 RANBP1P43487 201 aa12.11□□□□□ -0.47
PCDHGA9-202ENST00000616887 PPP2R2AP63151 447 aa12.11□□□□□ -0.47
PCDHGA9-202ENST00000616887 CUL2Q13617 745 aa12.11□□□□□ -0.47
PCDHGA9-202ENST00000616887 NCOA4Q13772 614 aa12.11□□□□□ -0.47
PCDHGA9-202ENST00000616887 CLEC16AQ2KHT3 1053 aa12.11□□□□□ -0.47
PCDHGA9-202ENST00000616887 WDR44Q5JSH3 913 aa12.11□□□□□ -0.47
PCDHGA9-202ENST00000616887 CGRRF1Q99675 332 aa12.11□□□□□ -0.47
PCDHGA9-202ENST00000616887 INO80BQ9C086 356 aaPredicted RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms