RNA–Protein interactions for RNA: ENST00000616236.1

RFC3-203, Transcript of replication factor C subunit 3, humanhuman

TSL 3

Gene RFC3, Length 612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-203ENST00000616236 SPRED2Q7Z698 418 aa5.78□□□□□ -1.48
RFC3-203ENST00000616236 ANKRD23Q86SG2 305 aa5.78□□□□□ -1.48
RFC3-203ENST00000616236 ZC3H18Q86VM9 953 aaKnown RBP5.78□□□□□ -1.48
RFC3-203ENST00000616236 YAF2Q8IY57 180 aa5.78□□□□□ -1.48
RFC3-203ENST00000616236 TCP11L2Q8N4U5 519 aa5.78□□□□□ -1.48
RFC3-203ENST00000616236 TSPYL6Q8N831 410 aa5.78□□□□□ -1.48
RFC3-203ENST00000616236 ZNF384Q8TF68 577 aa5.78□□□□□ -1.48
RFC3-203ENST00000616236 BCL7CQ8WUZ0 217 aaPredicted RBP5.78□□□□□ -1.48
RFC3-203ENST00000616236 CASKIN2Q8WXE0 1202 aa5.78□□□□□ -1.48
RFC3-203ENST00000616236 SDF4Q9BRK5 362 aa5.78□□□□□ -1.48
RFC3-203ENST00000616236 C11orf54Q9H0W9 315 aaPredicted RBP5.78□□□□□ -1.48
RFC3-203ENST00000616236 PABPC3Q9H361 631 aaKnown RBP5.78□□□□□ -1.48
RFC3-203ENST00000616236 SEPSECSQ9HD40 501 aaKnown RBP5.78□□□□□ -1.48
RFC3-203ENST00000616236 TMEM160Q9NX00 188 aa5.78□□□□□ -1.48
RFC3-203ENST00000616236 CDC42EP3Q9UKI2 254 aa5.78□□□□□ -1.48
RFC3-203ENST00000616236 ARHGAP26Q9UNA1 814 aa5.78□□□□□ -1.48
RFC3-203ENST00000616236 PAXBP1Q9Y5B6 917 aa5.78□□□□□ -1.48
RFC3-203ENST00000616236 HS3ST4Q9Y661 456 aa5.78□□□□□ -1.48
RFC3-203ENST00000616236 A0A087WWL8 130 aa5.77□□□□□ -1.49
RFC3-203ENST00000616236 A0A0G2JNJ9 132 aa5.77□□□□□ -1.49
RFC3-203ENST00000616236 F5H0A9 414 aaPredicted RBP5.77□□□□□ -1.49
RFC3-203ENST00000616236 DAPK3O43293 454 aa5.77□□□□□ -1.49
RFC3-203ENST00000616236 KCNQ3O43525 872 aa5.77□□□□□ -1.49
RFC3-203ENST00000616236 ZBED4O75132 1171 aa5.77□□□□□ -1.49
RFC3-203ENST00000616236 ITGA10O75578 1167 aa5.77□□□□□ -1.49
RFC3-203ENST00000616236 USP1O94782 785 aa5.77□□□□□ -1.49
RFC3-203ENST00000616236 ALDH1A2O94788 518 aa5.77□□□□□ -1.49
RFC3-203ENST00000616236 UNC5CO95185 931 aa5.77□□□□□ -1.49
RFC3-203ENST00000616236 MPOP05164 745 aa5.77□□□□□ -1.49
RFC3-203ENST00000616236 GNAI3P08754 354 aa5.77□□□□□ -1.49
RFC3-203ENST00000616236 ZSCAN22P10073 491 aaPredicted RBP5.77□□□□□ -1.49
RFC3-203ENST00000616236 NPPBP16860 134 aa5.77□□□□□ -1.49
RFC3-203ENST00000616236 RXRAP19793 462 aa5.77□□□□□ -1.49
RFC3-203ENST00000616236 BTF3P20290 206 aaKnown RBP5.77□□□□□ -1.49
RFC3-203ENST00000616236 MCCP23508 829 aa5.77□□□□□ -1.49
RFC3-203ENST00000616236 HOXD12P35452 270 aa5.77□□□□□ -1.49
RFC3-203ENST00000616236 KRT20P35900 424 aa5.77□□□□□ -1.49
RFC3-203ENST00000616236 MAPKAPK2P49137 400 aa5.77□□□□□ -1.49
RFC3-203ENST00000616236 SLC11A2P49281 568 aa5.77□□□□□ -1.49
RFC3-203ENST00000616236 CLNS1AP54105 237 aaKnown RBP5.77□□□□□ -1.49
RFC3-203ENST00000616236 ATXN1P54253 815 aaKnown RBP5.77□□□□□ -1.49
RFC3-203ENST00000616236 NAP1L1P55209 391 aaKnown RBP5.77□□□□□ -1.49
RFC3-203ENST00000616236 VAMP2P63027 116 aa5.77□□□□□ -1.49
RFC3-203ENST00000616236 GNAI1P63096 354 aa5.77□□□□□ -1.49
RFC3-203ENST00000616236 ZNF200P98182 395 aaPredicted RBP5.77□□□□□ -1.49
RFC3-203ENST00000616236 MAPKAPK3Q16644 382 aa5.77□□□□□ -1.49
RFC3-203ENST00000616236 PABPC1LQ4VXU2 614 aaKnown RBP5.77□□□□□ -1.49
RFC3-203ENST00000616236 FAM205BPQ63HN1 556 aa5.77□□□□□ -1.49
RFC3-203ENST00000616236 RAP1GAP2Q684P5 730 aa5.77□□□□□ -1.49
RFC3-203ENST00000616236 HAUS3Q68CZ6 603 aa5.77□□□□□ -1.49
RFC3-203ENST00000616236 TMEM200BQ69YZ2 307 aa5.77□□□□□ -1.49
RFC3-203ENST00000616236 CRTC1Q6UUV9 634 aa5.77□□□□□ -1.49
RFC3-203ENST00000616236 KIAA0408Q6ZU52 694 aa5.77□□□□□ -1.49
RFC3-203ENST00000616236 PLXDC1Q8IUK5 500 aa5.77□□□□□ -1.49
RFC3-203ENST00000616236 LILRA2Q8N149 483 aa5.77□□□□□ -1.49
RFC3-203ENST00000616236 LSMEM1Q8N8F7 131 aa5.77□□□□□ -1.49
RFC3-203ENST00000616236 SCAMP5Q8TAC9 235 aa5.77□□□□□ -1.49
RFC3-203ENST00000616236 THAP4Q8WY91 577 aa5.77□□□□□ -1.49
RFC3-203ENST00000616236 RFFLQ8WZ73 363 aa5.77□□□□□ -1.49
RFC3-203ENST00000616236 ZUFSPQ96AP4 578 aa5.77□□□□□ -1.49
RFC3-203ENST00000616236 CCDC120Q96HB5 630 aa5.77□□□□□ -1.49
RFC3-203ENST00000616236 DDX23Q9BUQ8 820 aaKnown RBP5.77□□□□□ -1.49
RFC3-203ENST00000616236 AGXT2Q9BYV1 514 aa5.77□□□□□ -1.49
RFC3-203ENST00000616236 PAIP1Q9H074 479 aaKnown RBP5.77□□□□□ -1.49
RFC3-203ENST00000616236 PCDHAC1Q9H158 963 aa5.77□□□□□ -1.49
RFC3-203ENST00000616236 RSPH9Q9H1X1 276 aaPredicted RBP5.77□□□□□ -1.49
RFC3-203ENST00000616236 TAF1DQ9H5J8 278 aaPredicted RBP5.77□□□□□ -1.49
RFC3-203ENST00000616236 HEYLQ9NQ87 328 aaPredicted RBP5.77□□□□□ -1.49
RFC3-203ENST00000616236 Q9UFV3 132 aa5.77□□□□□ -1.49
RFC3-203ENST00000616236 FBXO10Q9UK96 956 aa5.77□□□□□ -1.49
RFC3-203ENST00000616236 ZMYND8Q9ULU4 1186 aaPredicted RBP5.77□□□□□ -1.49
RFC3-203ENST00000616236 PLA2G2DQ9UNK4 145 aa5.77□□□□□ -1.49
RFC3-203ENST00000616236 GPR34Q9UPC5 381 aa5.77□□□□□ -1.49
RFC3-203ENST00000616236 MTO1Q9Y2Z2 717 aaKnown RBP5.77□□□□□ -1.49
RFC3-203ENST00000616236 PGPEP1LA6NFU8 196 aa5.76□□□□□ -1.49
RFC3-203ENST00000616236 USO1O60763 962 aaKnown RBP5.76□□□□□ -1.49
RFC3-203ENST00000616236 DNAJB5O75953 348 aa5.76□□□□□ -1.49
RFC3-203ENST00000616236 GASTP01350 101 aa5.76□□□□□ -1.49
RFC3-203ENST00000616236 GJB1P08034 283 aa5.76□□□□□ -1.49
RFC3-203ENST00000616236 IL2RBP14784 551 aa5.76□□□□□ -1.49
RFC3-203ENST00000616236 EGR1P18146 543 aa5.76□□□□□ -1.49
RFC3-203ENST00000616236 GATA4P43694 442 aa5.76□□□□□ -1.49
RFC3-203ENST00000616236 ALDH1A3P47895 512 aa5.76□□□□□ -1.49
RFC3-203ENST00000616236 AARSP49588 968 aaKnown RBP eCLIP5.76□□□□□ -1.49
RFC3-203ENST00000616236 MAN2A2P49641 1150 aa5.76□□□□□ -1.49
RFC3-203ENST00000616236 STAT5BP51692 787 aa5.76□□□□□ -1.49
RFC3-203ENST00000616236 CASP6P55212 293 aa5.76□□□□□ -1.49
RFC3-203ENST00000616236 UCP3P55916 312 aa5.76□□□□□ -1.49
RFC3-203ENST00000616236 WNT3AP56704 352 aa5.76□□□□□ -1.49
RFC3-203ENST00000616236 ACTR2P61160 394 aa5.76□□□□□ -1.49
RFC3-203ENST00000616236 AP2B1P63010 937 aa5.76□□□□□ -1.49
RFC3-203ENST00000616236 MEA1Q16626 185 aa5.76□□□□□ -1.49
RFC3-203ENST00000616236 PLEKHN1Q494U1 663 aaPredicted RBP5.76□□□□□ -1.49
RFC3-203ENST00000616236 ZDHHC24Q6UX98 284 aa5.76□□□□□ -1.49
RFC3-203ENST00000616236 ZNF574Q6ZN55 896 aaPredicted RBP5.76□□□□□ -1.49
RFC3-203ENST00000616236 IL17RDQ8NFM7 739 aa5.76□□□□□ -1.49
RFC3-203ENST00000616236 CSGALNACT1Q8TDX6 532 aa5.76□□□□□ -1.49
RFC3-203ENST00000616236 SPSB4Q96A44 273 aa5.76□□□□□ -1.49
RFC3-203ENST00000616236 TMEM209Q96SK2 561 aa5.76□□□□□ -1.49
RFC3-203ENST00000616236 TREX2Q9BQ50 279 aaPredicted RBP5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms