RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 NBPF15Q8N660 670 aa19.72■□□□□ 0.75
SPAST-203ENST00000615843 B4GALNT2Q8NHY0 566 aa19.72■□□□□ 0.75
SPAST-203ENST00000615843 RAVER2Q9HCJ3 691 aaKnown RBP19.72■□□□□ 0.75
SPAST-203ENST00000615843 E2F8A0AVK6 867 aa19.72■□□□□ 0.75
SPAST-203ENST00000615843 ZNF189O75820 626 aaPredicted RBP19.72■□□□□ 0.75
SPAST-203ENST00000615843 TFRCP02786 760 aaKnown RBP19.72■□□□□ 0.75
SPAST-203ENST00000615843 ASNSP08243 561 aa19.72■□□□□ 0.75
SPAST-203ENST00000615843 PDGFRAP16234 1089 aa19.72■□□□□ 0.75
SPAST-203ENST00000615843 PSMC3P17980 439 aa19.72■□□□□ 0.75
SPAST-203ENST00000615843 YWHABP31946 246 aaKnown RBP19.72■□□□□ 0.75
SPAST-203ENST00000615843 PREPLQ4J6C6 727 aaPredicted RBP19.72■□□□□ 0.75
SPAST-203ENST00000615843 ZNF302Q9NR11 478 aa19.72■□□□□ 0.75
SPAST-203ENST00000615843 NIPSNAP3AQ9UFN0 247 aaPredicted RBP19.72■□□□□ 0.75
SPAST-203ENST00000615843 MAD2L2Q9UI95 211 aa19.72■□□□□ 0.75
SPAST-203ENST00000615843 P4HA2O15460 535 aa19.72■□□□□ 0.75
SPAST-203ENST00000615843 HUS1O60921 280 aa19.72■□□□□ 0.75
SPAST-203ENST00000615843 TMCC1O94876 653 aa19.72■□□□□ 0.75
SPAST-203ENST00000615843 GFAPP14136 432 aa19.72■□□□□ 0.75
SPAST-203ENST00000615843 PON1P27169 355 aa19.72■□□□□ 0.75
SPAST-203ENST00000615843 AGAP3Q96P47 875 aa19.72■□□□□ 0.75
SPAST-203ENST00000615843 UBE2Q2LH0YL09 131 aa19.72■□□□□ 0.75
SPAST-203ENST00000615843 FKBP6O75344 327 aa19.72■□□□□ 0.75
SPAST-203ENST00000615843 PHKA2P46019 1235 aa19.72■□□□□ 0.75
SPAST-203ENST00000615843 CRKP46108 304 aa19.72■□□□□ 0.75
SPAST-203ENST00000615843 UGP2Q16851 508 aa19.72■□□□□ 0.75
SPAST-203ENST00000615843 SNX30Q5VWJ9 437 aa19.72■□□□□ 0.75
SPAST-203ENST00000615843 FAM196AQ6ZSG2 479 aa19.72■□□□□ 0.75
SPAST-203ENST00000615843 E5RI56 91 aa19.71■□□□□ 0.75
SPAST-203ENST00000615843 DMC1Q14565 340 aa19.71■□□□□ 0.75
SPAST-203ENST00000615843 SBK1Q52WX2 424 aa19.71■□□□□ 0.75
SPAST-203ENST00000615843 PODNQ7Z5L7 613 aa19.71■□□□□ 0.75
SPAST-203ENST00000615843 TIPINQ9BVW5 301 aa19.71■□□□□ 0.75
SPAST-203ENST00000615843 C2orf40Q9H1Z8 148 aa19.71■□□□□ 0.75
SPAST-203ENST00000615843 LMTK3Q96Q04 1460 aa19.71■□□□□ 0.75
SPAST-203ENST00000615843 ELF3P78545 371 aaPredicted RBP19.71■□□□□ 0.75
SPAST-203ENST00000615843 NFX1Q12986 1120 aaKnown RBP19.71■□□□□ 0.75
SPAST-203ENST00000615843 PAWRQ96IZ0 340 aaKnown RBP19.71■□□□□ 0.75
SPAST-203ENST00000615843 SIKE1Q9BRV8 207 aa19.71■□□□□ 0.75
SPAST-203ENST00000615843 SEMA4AQ9H3S1 761 aa19.71■□□□□ 0.75
SPAST-203ENST00000615843 TOPORSQ9NS56 1045 aaPredicted RBP19.71■□□□□ 0.75
SPAST-203ENST00000615843 KCND2Q9NZV8 630 aa19.71■□□□□ 0.75
SPAST-203ENST00000615843 CDC42BPGQ6DT37 1551 aa19.71■□□□□ 0.75
SPAST-203ENST00000615843 UBA6A0AVT1 1052 aaPredicted RBP19.71■□□□□ 0.75
SPAST-203ENST00000615843 VCPP55072 806 aaKnown RBP19.71■□□□□ 0.75
SPAST-203ENST00000615843 ATXN2LQ8WWM7 1075 aaKnown RBP19.71■□□□□ 0.75
SPAST-203ENST00000615843 OPTNQ96CV9 577 aa19.71■□□□□ 0.75
SPAST-203ENST00000615843 MTMR8Q96EF0 704 aa19.71■□□□□ 0.75
SPAST-203ENST00000615843 PLA2G12BQ9BX93 195 aa19.71■□□□□ 0.75
SPAST-203ENST00000615843 TMEM120AQ9BXJ8 343 aa19.71■□□□□ 0.75
SPAST-203ENST00000615843 TAGLN3Q9UI15 199 aa19.71■□□□□ 0.75
SPAST-203ENST00000615843 CNOT7Q9UIV1 285 aaKnown RBP19.71■□□□□ 0.75
SPAST-203ENST00000615843 KIAA0391O15091 583 aaKnown RBP19.71■□□□□ 0.75
SPAST-203ENST00000615843 ADORA2BP29275 332 aa19.71■□□□□ 0.75
SPAST-203ENST00000615843 RAP1GDS1P52306 607 aa19.71■□□□□ 0.75
SPAST-203ENST00000615843 R3HDM1Q15032 1099 aaKnown RBP19.71■□□□□ 0.75
SPAST-203ENST00000615843 RC3H1Q5TC82 1133 aaKnown RBP19.71■□□□□ 0.75
SPAST-203ENST00000615843 DPP9Q86TI2 863 aa19.71■□□□□ 0.75
SPAST-203ENST00000615843 PARD3BQ8TEW8 1205 aa19.71■□□□□ 0.75
SPAST-203ENST00000615843 MIEF2Q96C03 454 aa19.71■□□□□ 0.75
SPAST-203ENST00000615843 EGFL8Q99944 293 aa19.71■□□□□ 0.75
SPAST-203ENST00000615843 QRICH2Q9H0J4 1663 aa19.71■□□□□ 0.75
SPAST-203ENST00000615843 TRAPPC3O43617 180 aa19.7■□□□□ 0.74
SPAST-203ENST00000615843 CLK1P49759 484 aaKnown RBP19.7■□□□□ 0.74
SPAST-203ENST00000615843 RASA2Q15283 850 aa19.7■□□□□ 0.74
SPAST-203ENST00000615843 STXBP2Q15833 593 aa19.7■□□□□ 0.74
SPAST-203ENST00000615843 TRMT5Q32P41 509 aaKnown RBP19.7■□□□□ 0.74
SPAST-203ENST00000615843 YTHDF3Q7Z739 585 aaKnown RBP19.7■□□□□ 0.74
SPAST-203ENST00000615843 MFN1Q8IWA4 741 aa19.7■□□□□ 0.74
SPAST-203ENST00000615843 CIITAP33076 1130 aa19.7■□□□□ 0.74
SPAST-203ENST00000615843 LAYNQ6UX15 382 aa19.7■□□□□ 0.74
SPAST-203ENST00000615843 TMC3Q7Z5M5 1100 aa19.7■□□□□ 0.74
SPAST-203ENST00000615843 ATP8B4Q8TF62 1192 aa19.7■□□□□ 0.74
SPAST-203ENST00000615843 RSAD1Q9HA92 442 aa19.7■□□□□ 0.74
SPAST-203ENST00000615843 GIMAP4Q9NUV9 329 aa19.7■□□□□ 0.74
SPAST-203ENST00000615843 ZBTB39O15060 712 aa19.7■□□□□ 0.74
SPAST-203ENST00000615843 NUP107P57740 925 aa19.7■□□□□ 0.74
SPAST-203ENST00000615843 SLC34A1Q06495 639 aa19.7■□□□□ 0.74
SPAST-203ENST00000615843 ZNF543Q08ER8 600 aa19.7■□□□□ 0.74
SPAST-203ENST00000615843 OASLQ15646 514 aaKnown RBP19.7■□□□□ 0.74
SPAST-203ENST00000615843 FAM71DQ8N9W8 422 aa19.7■□□□□ 0.74
SPAST-203ENST00000615843 TSEN2Q8NCE0 465 aaKnown RBP19.7■□□□□ 0.74
SPAST-203ENST00000615843 BEST2Q8NFU1 509 aa19.7■□□□□ 0.74
SPAST-203ENST00000615843 RPS6KA5O75582 802 aa19.7■□□□□ 0.74
SPAST-203ENST00000615843 PDAP1Q13442 181 aaKnown RBP19.7■□□□□ 0.74
SPAST-203ENST00000615843 C6orf10Q5SRN2 563 aa19.7■□□□□ 0.74
SPAST-203ENST00000615843 PPHLN1Q8NEY8 458 aaKnown RBP19.7■□□□□ 0.74
SPAST-203ENST00000615843 FLAD1Q8NFF5 587 aa19.7■□□□□ 0.74
SPAST-203ENST00000615843 NSUN6Q8TEA1 469 aaKnown RBP19.7■□□□□ 0.74
SPAST-203ENST00000615843 TEX12Q9BXU0 123 aa19.7■□□□□ 0.74
SPAST-203ENST00000615843 ALDH5A1P51649 535 aaPredicted RBP19.69■□□□□ 0.74
SPAST-203ENST00000615843 IYDQ6PHW0 289 aa19.69■□□□□ 0.74
SPAST-203ENST00000615843 FEZF2Q8TBJ5 459 aa19.69■□□□□ 0.74
SPAST-203ENST00000615843 ALBP02768 609 aa19.69■□□□□ 0.74
SPAST-203ENST00000615843 RFX5P48382 616 aaPredicted RBP19.69■□□□□ 0.74
SPAST-203ENST00000615843 ERVK-9P63128 1117 aa19.69■□□□□ 0.74
SPAST-203ENST00000615843 ZNF677Q86XU0 584 aa19.69■□□□□ 0.74
SPAST-203ENST00000615843 VPS33BQ9H267 617 aa19.69■□□□□ 0.74
SPAST-203ENST00000615843 TMEM8AQ9HCN3 771 aa19.69■□□□□ 0.74
SPAST-203ENST00000615843 AP3B1O00203 1094 aa19.69■□□□□ 0.74
SPAST-203ENST00000615843 SOX11P35716 441 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms