RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 CASKIN2Q8WXE0 1202 aa11.46□□□□□ -0.58
FAM3A-221ENST00000612856 ABTB1Q969K4 478 aaPredicted RBP11.46□□□□□ -0.58
FAM3A-221ENST00000612856 ARHGAP39Q9C0H5 1083 aa11.46□□□□□ -0.58
FAM3A-221ENST00000612856 SEMA6BQ9H3T3 888 aa11.46□□□□□ -0.58
FAM3A-221ENST00000612856 AGPAT3Q9NRZ7 376 aa11.46□□□□□ -0.58
FAM3A-221ENST00000612856 DLGAP2Q9P1A6 1054 aa11.46□□□□□ -0.58
FAM3A-221ENST00000612856 ZMYND8Q9ULU4 1186 aaPredicted RBP11.46□□□□□ -0.58
FAM3A-221ENST00000612856 ASXL3Q9C0F0 2248 aa11.46□□□□□ -0.58
FAM3A-221ENST00000612856 PRRG1O14668 218 aa11.45□□□□□ -0.58
FAM3A-221ENST00000612856 RAD51CO43502 376 aa11.45□□□□□ -0.58
FAM3A-221ENST00000612856 KLRC4O43908 158 aa11.45□□□□□ -0.58
FAM3A-221ENST00000612856 RHOBTB3O94955 611 aa11.45□□□□□ -0.58
FAM3A-221ENST00000612856 HLA-DRAP01903 254 aa11.45□□□□□ -0.58
FAM3A-221ENST00000612856 SYN1P17600 705 aa11.45□□□□□ -0.58
FAM3A-221ENST00000612856 RAP1GAPP47736 663 aa11.45□□□□□ -0.58
FAM3A-221ENST00000612856 SKOR1P84550 965 aa11.45□□□□□ -0.58
FAM3A-221ENST00000612856 DRP2Q13474 957 aa11.45□□□□□ -0.58
FAM3A-221ENST00000612856 MFSD10Q14728 455 aa11.45□□□□□ -0.58
FAM3A-221ENST00000612856 GLE1Q53GS7 698 aaKnown RBP11.45□□□□□ -0.58
FAM3A-221ENST00000612856 CDKAL1Q5VV42 579 aa11.45□□□□□ -0.58
FAM3A-221ENST00000612856 OTOP2Q7RTS6 562 aa11.45□□□□□ -0.58
FAM3A-221ENST00000612856 RFX6Q8HWS3 928 aa11.45□□□□□ -0.58
FAM3A-221ENST00000612856 B4GALNT2Q8NHY0 566 aa11.45□□□□□ -0.58
FAM3A-221ENST00000612856 ACSF2Q96CM8 615 aaPredicted RBP11.45□□□□□ -0.58
FAM3A-221ENST00000612856 ACP6Q9NPH0 428 aa11.45□□□□□ -0.58
FAM3A-221ENST00000612856 RAB20Q9NX57 234 aa11.45□□□□□ -0.58
FAM3A-221ENST00000612856 AMACRQ9UHK6 382 aa11.45□□□□□ -0.58
FAM3A-221ENST00000612856 MAD1L1Q9Y6D9 718 aa11.45□□□□□ -0.58
FAM3A-221ENST00000612856 FTLP02792 175 aaPredicted RBP11.45□□□□□ -0.58
FAM3A-221ENST00000612856 MAN1A1P33908 653 aa11.45□□□□□ -0.58
FAM3A-221ENST00000612856 ALDH7A1P49419 539 aaKnown RBP11.45□□□□□ -0.58
FAM3A-221ENST00000612856 CDH8P55286 799 aa11.45□□□□□ -0.58
FAM3A-221ENST00000612856 PSMC1P62191 440 aaKnown RBP11.45□□□□□ -0.58
FAM3A-221ENST00000612856 TSPY1Q01534 308 aa11.45□□□□□ -0.58
FAM3A-221ENST00000612856 SETDB1Q15047 1291 aa11.45□□□□□ -0.58
FAM3A-221ENST00000612856 NBPF20Q3BBV1 942 aa11.45□□□□□ -0.58
FAM3A-221ENST00000612856 FAM102AQ5T9C2 384 aaPredicted RBP11.45□□□□□ -0.58
FAM3A-221ENST00000612856 TMC7Q7Z402 723 aa11.45□□□□□ -0.58
FAM3A-221ENST00000612856 CREG2Q8IUH2 290 aa11.45□□□□□ -0.58
FAM3A-221ENST00000612856 RSAD2Q8WXG1 361 aa11.45□□□□□ -0.58
FAM3A-221ENST00000612856 TMEM169Q96HH4 297 aa11.45□□□□□ -0.58
FAM3A-221ENST00000612856 GAD1Q99259 594 aa11.45□□□□□ -0.58
FAM3A-221ENST00000612856 PRMT1Q99873 361 aaKnown RBP11.45□□□□□ -0.58
FAM3A-221ENST00000612856 ETNK1Q9HBU6 452 aa11.45□□□□□ -0.58
FAM3A-221ENST00000612856 ROBO3Q96MS0 1386 aa11.45□□□□□ -0.58
FAM3A-221ENST00000612856 SPRED3Q2MJR0 410 aa11.45□□□□□ -0.58
FAM3A-221ENST00000612856 MMGT1Q8N4V1 131 aa11.45□□□□□ -0.58
FAM3A-221ENST00000612856 SPATA20Q8TB22 786 aa11.45□□□□□ -0.58
FAM3A-221ENST00000612856 ATP8B4Q8TF62 1192 aa11.45□□□□□ -0.58
FAM3A-221ENST00000612856 SEL1LQ9UBV2 794 aa11.45□□□□□ -0.58
FAM3A-221ENST00000612856 NUDT5Q9UKK9 219 aa11.45□□□□□ -0.58
FAM3A-221ENST00000612856 F5P12259 2224 aa11.45□□□□□ -0.58
FAM3A-221ENST00000612856 CCDC78A2IDD5 438 aa11.44□□□□□ -0.58
FAM3A-221ENST00000612856 CHN1P15882 459 aa11.44□□□□□ -0.58
FAM3A-221ENST00000612856 HSD17B3P37058 310 aa11.44□□□□□ -0.58
FAM3A-221ENST00000612856 BPIFB4P59827 614 aa11.44□□□□□ -0.58
FAM3A-221ENST00000612856 KCNJ2P63252 427 aa11.44□□□□□ -0.58
FAM3A-221ENST00000612856 HADHQ16836 314 aaKnown RBP11.44□□□□□ -0.58
FAM3A-221ENST00000612856 TMEM154Q6P9G4 183 aa11.44□□□□□ -0.58
FAM3A-221ENST00000612856 PCSK9Q8NBP7 692 aaKnown RBP11.44□□□□□ -0.58
FAM3A-221ENST00000612856 GANCQ8TET4 914 aa11.44□□□□□ -0.58
FAM3A-221ENST00000612856 ZNF512Q96ME7 567 aaPredicted RBP11.44□□□□□ -0.58
FAM3A-221ENST00000612856 ZIC5Q96T25 663 aa11.44□□□□□ -0.58
FAM3A-221ENST00000612856 IQCGQ9H095 443 aaKnown RBP11.44□□□□□ -0.58
FAM3A-221ENST00000612856 TMEM165Q9HC07 324 aa11.44□□□□□ -0.58
FAM3A-221ENST00000612856 ABCF3Q9NUQ8 709 aa11.44□□□□□ -0.58
FAM3A-221ENST00000612856 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.44□□□□□ -0.58
FAM3A-221ENST00000612856 M0R2N6 131 aa11.44□□□□□ -0.58
FAM3A-221ENST00000612856 B4GALT5O43286 388 aa11.44□□□□□ -0.58
FAM3A-221ENST00000612856 TBC1D12O60347 775 aa11.44□□□□□ -0.58
FAM3A-221ENST00000612856 AKAP3O75969 853 aa11.44□□□□□ -0.58
FAM3A-221ENST00000612856 SRGAP2BP0DMP2 458 aa11.44□□□□□ -0.58
FAM3A-221ENST00000612856 IRF1P10914 325 aa11.44□□□□□ -0.58
FAM3A-221ENST00000612856 PSMA2P25787 234 aa11.44□□□□□ -0.58
FAM3A-221ENST00000612856 SNX16P57768 344 aa11.44□□□□□ -0.58
FAM3A-221ENST00000612856 DBN1Q16643 649 aa11.44□□□□□ -0.58
FAM3A-221ENST00000612856 DUSP9Q99956 384 aaKnown RBP11.44□□□□□ -0.58
FAM3A-221ENST00000612856 ADAM2Q99965 735 aa11.44□□□□□ -0.58
FAM3A-221ENST00000612856 FAM8A1Q9UBU6 413 aa11.44□□□□□ -0.58
FAM3A-221ENST00000612856 RASSF10A6NK89 507 aa11.44□□□□□ -0.58
FAM3A-221ENST00000612856 ATP2A1O14983 1001 aa11.44□□□□□ -0.58
FAM3A-221ENST00000612856 PYGLP06737 847 aa11.44□□□□□ -0.58
FAM3A-221ENST00000612856 WEE1P30291 646 aa11.44□□□□□ -0.58
FAM3A-221ENST00000612856 ADCY8P40145 1251 aa11.44□□□□□ -0.58
FAM3A-221ENST00000612856 INHBEP58166 350 aa11.44□□□□□ -0.58
FAM3A-221ENST00000612856 TTI2Q6NXR4 508 aa11.44□□□□□ -0.58
FAM3A-221ENST00000612856 DNERQ8NFT8 737 aa11.44□□□□□ -0.58
FAM3A-221ENST00000612856 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.44□□□□□ -0.58
FAM3A-221ENST00000612856 TAS1R2Q8TE23 839 aa11.44□□□□□ -0.58
FAM3A-221ENST00000612856 GTF3C2Q8WUA4 911 aaPredicted RBP11.44□□□□□ -0.58
FAM3A-221ENST00000612856 C7orf25Q9BPX7 421 aa11.44□□□□□ -0.58
FAM3A-221ENST00000612856 FAM114A2Q9NRY5 505 aa11.44□□□□□ -0.58
FAM3A-221ENST00000612856 LIMA1Q9UHB6 759 aaKnown RBP11.44□□□□□ -0.58
FAM3A-221ENST00000612856 TBK1Q9UHD2 729 aa11.44□□□□□ -0.58
FAM3A-221ENST00000612856 SUN1O94901 812 aa11.43□□□□□ -0.58
FAM3A-221ENST00000612856 MSH2P43246 934 aa11.43□□□□□ -0.58
FAM3A-221ENST00000612856 PSEN2P49810 448 aa11.43□□□□□ -0.58
FAM3A-221ENST00000612856 NOP14P78316 857 aaKnown RBP11.43□□□□□ -0.58
FAM3A-221ENST00000612856 MTMR3Q13615 1198 aa11.43□□□□□ -0.58
FAM3A-221ENST00000612856 NOTUMQ6P988 496 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms