RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 CTHP32929 405 aa25.55■■□□□ 1.68
MMP28-203ENST00000612672 AARSP49588 968 aaKnown RBP eCLIP25.55■■□□□ 1.68
MMP28-203ENST00000612672 MLLT6P55198 1093 aaPredicted RBP25.55■■□□□ 1.68
MMP28-203ENST00000612672 RAD51AP2Q09MP3 1159 aa25.55■■□□□ 1.68
MMP28-203ENST00000612672 PKN3Q6P5Z2 889 aa25.55■■□□□ 1.68
MMP28-203ENST00000612672 ARHGAP30Q7Z6I6 1101 aaPredicted RBP25.55■■□□□ 1.68
MMP28-203ENST00000612672 LONP2Q86WA8 852 aa25.55■■□□□ 1.68
MMP28-203ENST00000612672 ARID3BQ8IVW6 561 aaPredicted RBP25.55■■□□□ 1.68
MMP28-203ENST00000612672 CCDC83Q8IWF9 413 aa25.55■■□□□ 1.68
MMP28-203ENST00000612672 FAM160A2Q8N612 972 aaPredicted RBP25.55■■□□□ 1.68
MMP28-203ENST00000612672 CSGALNACT1Q8TDX6 532 aa25.55■■□□□ 1.68
MMP28-203ENST00000612672 MAFFQ9ULX9 164 aa25.55■■□□□ 1.68
MMP28-203ENST00000612672 SLC27A5Q9Y2P5 690 aa25.55■■□□□ 1.68
MMP28-203ENST00000612672 OBSL1O75147 1896 aa25.55■■□□□ 1.68
MMP28-203ENST00000612672 ZZEF1O43149 2961 aa25.54■■□□□ 1.68
MMP28-203ENST00000612672 PRAMEF12O95522 483 aa25.54■■□□□ 1.68
MMP28-203ENST00000612672 LRPAP1P30533 357 aa25.54■■□□□ 1.68
MMP28-203ENST00000612672 TNFSF9P41273 254 aa25.54■■□□□ 1.68
MMP28-203ENST00000612672 CDR1P51861 262 aa25.54■■□□□ 1.68
MMP28-203ENST00000612672 KPNA1P52294 538 aaPredicted RBP25.54■■□□□ 1.68
MMP28-203ENST00000612672 YWHAHQ04917 246 aaPredicted RBP25.54■■□□□ 1.68
MMP28-203ENST00000612672 PON2Q15165 354 aa25.54■■□□□ 1.68
MMP28-203ENST00000612672 TMEM161BQ8NDZ6 487 aa25.54■■□□□ 1.68
MMP28-203ENST00000612672 RXFP3Q9NSD7 469 aa25.54■■□□□ 1.68
MMP28-203ENST00000612672 PCDHB6Q9Y5E3 794 aa25.54■■□□□ 1.68
MMP28-203ENST00000612672 SCN1AP35498 2009 aa25.54■■□□□ 1.68
MMP28-203ENST00000612672 MTMR11A4FU01 709 aa25.53■■□□□ 1.68
MMP28-203ENST00000612672 TOM1L1O75674 476 aa25.53■■□□□ 1.68
MMP28-203ENST00000612672 TNK2Q07912 1038 aa25.53■■□□□ 1.68
MMP28-203ENST00000612672 CCINQ13939 588 aa25.53■■□□□ 1.68
MMP28-203ENST00000612672 LRRC32Q14392 662 aa25.53■■□□□ 1.68
MMP28-203ENST00000612672 ZBTB6Q15916 424 aa25.53■■□□□ 1.68
MMP28-203ENST00000612672 CCDC6Q16204 474 aa25.53■■□□□ 1.68
MMP28-203ENST00000612672 YAF2Q8IY57 180 aa25.53■■□□□ 1.68
MMP28-203ENST00000612672 ATAD1Q8NBU5 361 aa25.53■■□□□ 1.68
MMP28-203ENST00000612672 FBXO18Q8NFZ0 1043 aa25.53■■□□□ 1.68
MMP28-203ENST00000612672 DRC1Q96MC2 740 aa25.53■■□□□ 1.68
MMP28-203ENST00000612672 C8orf33Q9H7E9 229 aaPredicted RBP25.53■■□□□ 1.68
MMP28-203ENST00000612672 TTC26A0AVF1 554 aa25.52■■□□□ 1.68
MMP28-203ENST00000612672 MAPTP10636 758 aaKnown RBP25.52■■□□□ 1.68
MMP28-203ENST00000612672 MARCKSP29966 332 aaPredicted RBP25.52■■□□□ 1.68
MMP28-203ENST00000612672 MCL1Q07820 350 aa25.52■■□□□ 1.68
MMP28-203ENST00000612672 PDIA5Q14554 519 aa25.52■■□□□ 1.68
MMP28-203ENST00000612672 CENPPQ6IPU0 288 aa25.52■■□□□ 1.68
MMP28-203ENST00000612672 MSANTD3Q96H12 275 aa25.52■■□□□ 1.68
MMP28-203ENST00000612672 NTPCRQ9BSD7 190 aaKnown RBP25.52■■□□□ 1.68
MMP28-203ENST00000612672 GPR88Q9GZN0 384 aa25.52■■□□□ 1.68
MMP28-203ENST00000612672 DNM3Q9UQ16 869 aa25.52■■□□□ 1.68
MMP28-203ENST00000612672 RBM19Q9Y4C8 960 aaKnown RBP25.52■■□□□ 1.68
MMP28-203ENST00000612672 SPEGQ15772 3267 aa25.51■■□□□ 1.67
MMP28-203ENST00000612672 CACNB1Q02641 598 aaPredicted RBP25.51■■□□□ 1.67
MMP28-203ENST00000612672 GPR17Q13304 367 aa25.51■■□□□ 1.67
MMP28-203ENST00000612672 SF3A2Q15428 464 aaKnown RBP25.51■■□□□ 1.67
MMP28-203ENST00000612672 E2F7Q96AV8 911 aa25.51■■□□□ 1.67
MMP28-203ENST00000612672 CHFRQ96EP1 664 aa25.51■■□□□ 1.67
MMP28-203ENST00000612672 KIF12Q96FN5 646 aa25.51■■□□□ 1.67
MMP28-203ENST00000612672 EXTL3O43909 919 aa25.5■■□□□ 1.67
MMP28-203ENST00000612672 FAM189A1O60320 539 aa25.5■■□□□ 1.67
MMP28-203ENST00000612672 KCNA4P22459 653 aa25.5■■□□□ 1.67
MMP28-203ENST00000612672 TRAPPC10P48553 1259 aa25.5■■□□□ 1.67
MMP28-203ENST00000612672 PXNP49023 591 aaPredicted RBP25.5■■□□□ 1.67
MMP28-203ENST00000612672 CYP4F8P98187 520 aa25.5■■□□□ 1.67
MMP28-203ENST00000612672 WDR5BQ86VZ2 330 aa25.5■■□□□ 1.67
MMP28-203ENST00000612672 SPIRE2Q8WWL2 714 aa25.5■■□□□ 1.67
MMP28-203ENST00000612672 PNMA5Q96PV4 448 aa25.5■■□□□ 1.67
MMP28-203ENST00000612672 LPIN3Q9BQK8 851 aa25.5■■□□□ 1.67
MMP28-203ENST00000612672 SMG9Q9H0W8 520 aaKnown RBP25.5■■□□□ 1.67
MMP28-203ENST00000612672 POLR3BQ9NW08 1133 aaPredicted RBP25.5■■□□□ 1.67
MMP28-203ENST00000612672 MYO16Q9Y6X6 1858 aa25.5■■□□□ 1.67
MMP28-203ENST00000612672 KIAA1549LQ6ZVL6 1849 aa25.49■■□□□ 1.67
MMP28-203ENST00000612672 NPHP3-ACAD11A0A0J9YXS1 232 aa25.49■■□□□ 1.67
MMP28-203ENST00000612672 GUCY2CP25092 1073 aa25.49■■□□□ 1.67
MMP28-203ENST00000612672 CNR2P34972 360 aa25.49■■□□□ 1.67
MMP28-203ENST00000612672 EPHB3P54753 998 aa25.49■■□□□ 1.67
MMP28-203ENST00000612672 DGKKQ5KSL6 1271 aa25.49■■□□□ 1.67
MMP28-203ENST00000612672 GPR158Q5T848 1215 aa25.49■■□□□ 1.67
MMP28-203ENST00000612672 DNAJB7Q7Z6W7 309 aaPredicted RBP25.49■■□□□ 1.67
MMP28-203ENST00000612672 RALGPS2Q86X27 583 aaPredicted RBP25.49■■□□□ 1.67
MMP28-203ENST00000612672 OR10T2Q8NGX3 314 aa25.49■■□□□ 1.67
MMP28-203ENST00000612672 PSMG2Q969U7 264 aa25.49■■□□□ 1.67
MMP28-203ENST00000612672 ATXN3LQ9H3M9 355 aa25.49■■□□□ 1.67
MMP28-203ENST00000612672 C17orf75Q9HAS0 396 aa25.49■■□□□ 1.67
MMP28-203ENST00000612672 ZNF638Q14966 1978 aaKnown RBP25.49■■□□□ 1.67
MMP28-203ENST00000612672 TCHHQ07283 1943 aa25.49■■□□□ 1.67
MMP28-203ENST00000612672 LACTBL1A8MY62 500 aa25.48■■□□□ 1.67
MMP28-203ENST00000612672 PLS3P13797 630 aa25.48■■□□□ 1.67
MMP28-203ENST00000612672 GABRR2P28476 465 aa25.48■■□□□ 1.67
MMP28-203ENST00000612672 STRN3Q13033 797 aa25.48■■□□□ 1.67
MMP28-203ENST00000612672 PLD1Q13393 1074 aa25.48■■□□□ 1.67
MMP28-203ENST00000612672 ENOX2Q16206 610 aaKnown RBP25.48■■□□□ 1.67
MMP28-203ENST00000612672 ZPBP2Q6X784 338 aa25.48■■□□□ 1.67
MMP28-203ENST00000612672 SMOC1Q9H4F8 434 aa25.48■■□□□ 1.67
MMP28-203ENST00000612672 IL21Q9HBE4 155 aa25.48■■□□□ 1.67
MMP28-203ENST00000612672 OR6C75A6NL08 312 aa25.47■■□□□ 1.67
MMP28-203ENST00000612672 TM4SF5O14894 197 aa25.47■■□□□ 1.67
MMP28-203ENST00000612672 AXIN1O15169 862 aa25.47■■□□□ 1.67
MMP28-203ENST00000612672 CLDN3O15551 220 aa25.47■■□□□ 1.67
MMP28-203ENST00000612672 ATF6P18850 670 aa25.47■■□□□ 1.67
MMP28-203ENST00000612672 ARHGAP29Q52LW3 1261 aa25.47■■□□□ 1.67
MMP28-203ENST00000612672 KRT79Q5XKE5 535 aa25.47■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms