RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 CASD1Q96PB1 797 aa18.76■□□□□ 0.59
SREK1-216ENST00000612404 CYP3A43Q9HB55 503 aa18.76■□□□□ 0.59
SREK1-216ENST00000612404 TBKBP1A7MCY6 615 aa18.76■□□□□ 0.59
SREK1-216ENST00000612404 DDHD2O94830 711 aa18.76■□□□□ 0.59
SREK1-216ENST00000612404 AMHP03971 560 aa18.76■□□□□ 0.59
SREK1-216ENST00000612404 IGFBP6P24592 240 aaPredicted RBP18.76■□□□□ 0.59
SREK1-216ENST00000612404 PDE6CP51160 858 aa18.76■□□□□ 0.59
SREK1-216ENST00000612404 VPS36Q86VN1 386 aa18.76■□□□□ 0.59
SREK1-216ENST00000612404 UROC1Q96N76 676 aa18.76■□□□□ 0.59
SREK1-216ENST00000612404 EFCAB14O75071 495 aa18.75■□□□□ 0.59
SREK1-216ENST00000612404 B3GAT3O94766 335 aa18.75■□□□□ 0.59
SREK1-216ENST00000612404 CALCAP01258 141 aa18.75■□□□□ 0.59
SREK1-216ENST00000612404 PAN2Q504Q3 1202 aaKnown RBP18.75■□□□□ 0.59
SREK1-216ENST00000612404 C17orf53Q8N3J3 647 aaPredicted RBP18.75■□□□□ 0.59
SREK1-216ENST00000612404 C3orf58Q8NDZ4 430 aa18.75■□□□□ 0.59
SREK1-216ENST00000612404 KIAA1524Q8TCG1 905 aa18.75■□□□□ 0.59
SREK1-216ENST00000612404 SLC20A1Q8WUM9 679 aa18.75■□□□□ 0.59
SREK1-216ENST00000612404 SEPT11Q9NVA2 429 aaKnown RBP18.75■□□□□ 0.59
SREK1-216ENST00000612404 GDAP2Q9NXN4 497 aa18.75■□□□□ 0.59
SREK1-216ENST00000612404 ADAMTS1Q9UHI8 967 aa18.75■□□□□ 0.59
SREK1-216ENST00000612404 ZMYND8Q9ULU4 1186 aaPredicted RBP18.75■□□□□ 0.59
SREK1-216ENST00000612404 B4GALT3O60512 393 aa18.74■□□□□ 0.59
SREK1-216ENST00000612404 HUS1O60921 280 aa18.74■□□□□ 0.59
SREK1-216ENST00000612404 IPO7O95373 1038 aaKnown RBP18.74■□□□□ 0.59
SREK1-216ENST00000612404 CYP11B1P15538 503 aa18.74■□□□□ 0.59
SREK1-216ENST00000612404 BPIFB4P59827 614 aa18.74■□□□□ 0.59
SREK1-216ENST00000612404 WDR5P61964 334 aaKnown RBP18.74■□□□□ 0.59
SREK1-216ENST00000612404 DEFB103AP81534 67 aa18.74■□□□□ 0.59
SREK1-216ENST00000612404 TAF3Q5VWG9 929 aa18.74■□□□□ 0.59
SREK1-216ENST00000612404 FAM117BQ6P1L5 589 aa18.74■□□□□ 0.59
SREK1-216ENST00000612404 ACRBPQ8NEB7 543 aa18.74■□□□□ 0.59
SREK1-216ENST00000612404 APPL2Q8NEU8 664 aa18.74■□□□□ 0.59
SREK1-216ENST00000612404 EPS8L1Q8TE68 723 aa18.74■□□□□ 0.59
SREK1-216ENST00000612404 HASPINQ8TF76 798 aa18.74■□□□□ 0.59
SREK1-216ENST00000612404 DPF3Q92784 378 aa18.74■□□□□ 0.59
SREK1-216ENST00000612404 PUF60Q9UHX1 559 aaKnown RBP18.74■□□□□ 0.59
SREK1-216ENST00000612404 CNTN6Q9UQ52 1028 aa18.74■□□□□ 0.59
SREK1-216ENST00000612404 LTBP2Q14767 1821 aa18.74■□□□□ 0.59
SREK1-216ENST00000612404 ZBBXA8MT70 800 aa18.74■□□□□ 0.59
SREK1-216ENST00000612404 OR1G1P47890 313 aa18.74■□□□□ 0.59
SREK1-216ENST00000612404 KCNJ6P48051 423 aa18.74■□□□□ 0.59
SREK1-216ENST00000612404 GFPT1Q06210 699 aaPredicted RBP18.74■□□□□ 0.59
SREK1-216ENST00000612404 DSC1Q08554 894 aa18.74■□□□□ 0.59
SREK1-216ENST00000612404 SOWAHAQ2M3V2 549 aa18.74■□□□□ 0.59
SREK1-216ENST00000612404 C16orf59Q7L2K0 433 aa18.74■□□□□ 0.59
SREK1-216ENST00000612404 TMCO2Q7Z6W1 182 aaPredicted RBP18.74■□□□□ 0.59
SREK1-216ENST00000612404 NOP9Q86U38 636 aaKnown RBP18.74■□□□□ 0.59
SREK1-216ENST00000612404 COLGALT2Q8IYK4 626 aa18.74■□□□□ 0.59
SREK1-216ENST00000612404 AGPAT1Q99943 283 aa18.74■□□□□ 0.59
SREK1-216ENST00000612404 MRPL45Q9BRJ2 306 aaKnown RBP18.74■□□□□ 0.59
SREK1-216ENST00000612404 MRPL9Q9BYD2 267 aaKnown RBP18.74■□□□□ 0.59
SREK1-216ENST00000612404 DNAJB4Q9UDY4 337 aa18.74■□□□□ 0.59
SREK1-216ENST00000612404 CYB561D2O14569 222 aa18.73■□□□□ 0.59
SREK1-216ENST00000612404 BAIAP3O94812 1187 aa18.73■□□□□ 0.59
SREK1-216ENST00000612404 FGBP02675 491 aa18.73■□□□□ 0.59
SREK1-216ENST00000612404 CYP27A1Q02318 531 aa18.73■□□□□ 0.59
SREK1-216ENST00000612404 ORC1Q13415 861 aa18.73■□□□□ 0.59
SREK1-216ENST00000612404 SPA17Q15506 151 aa18.73■□□□□ 0.59
SREK1-216ENST00000612404 ASTE1Q2TB18 679 aaPredicted RBP18.73■□□□□ 0.59
SREK1-216ENST00000612404 DSTYKQ6XUX3 929 aa18.73■□□□□ 0.59
SREK1-216ENST00000612404 ZNF365Q70YC5 407 aa18.73■□□□□ 0.59
SREK1-216ENST00000612404 GLYCTKQ8IVS8 523 aa18.73■□□□□ 0.59
SREK1-216ENST00000612404 TOP1MTQ969P6 601 aa18.73■□□□□ 0.59
SREK1-216ENST00000612404 TRMT1Q9NXH9 659 aaKnown RBP18.73■□□□□ 0.59
SREK1-216ENST00000612404 HMGXB4Q9UGU5 601 aa18.73■□□□□ 0.59
SREK1-216ENST00000612404 NOCTQ9UK39 431 aaKnown RBP18.73■□□□□ 0.59
SREK1-216ENST00000612404 BARX2Q9UMQ3 279 aaPredicted RBP18.73■□□□□ 0.59
SREK1-216ENST00000612404 EIF3CLB5ME19 914 aaKnown RBP18.73■□□□□ 0.59
SREK1-216ENST00000612404 CILPO75339 1184 aa18.73■□□□□ 0.59
SREK1-216ENST00000612404 TNFAIP3P21580 790 aa18.73■□□□□ 0.59
SREK1-216ENST00000612404 GNA15P30679 374 aa18.73■□□□□ 0.59
SREK1-216ENST00000612404 ZNF132P52740 706 aa18.73■□□□□ 0.59
SREK1-216ENST00000612404 DCLRE1AQ6PJP8 1040 aa18.73■□□□□ 0.59
SREK1-216ENST00000612404 TTC39CQ8N584 583 aa18.73■□□□□ 0.59
SREK1-216ENST00000612404 SENP8Q96LD8 212 aa18.73■□□□□ 0.59
SREK1-216ENST00000612404 EIF3CQ99613 913 aaKnown RBP18.73■□□□□ 0.59
SREK1-216ENST00000612404 L1RE1Q9UN81 338 aa18.73■□□□□ 0.59
SREK1-216ENST00000612404 ADGRG1Q9Y653 693 aa18.73■□□□□ 0.59
SREK1-216ENST00000612404 A0A087X0T9 212 aa18.72■□□□□ 0.59
SREK1-216ENST00000612404 ESPNB1AK53 854 aa18.72■□□□□ 0.59
SREK1-216ENST00000612404 F8W810 466 aa18.72■□□□□ 0.59
SREK1-216ENST00000612404 CCDC175P0C221 793 aa18.72■□□□□ 0.59
SREK1-216ENST00000612404 FAM228BP0C875 321 aa18.72■□□□□ 0.59
SREK1-216ENST00000612404 NDST1P52848 882 aa18.72■□□□□ 0.59
SREK1-216ENST00000612404 INCA1Q0VD86 236 aa18.72■□□□□ 0.59
SREK1-216ENST00000612404 SLC18A3Q16572 532 aa18.72■□□□□ 0.59
SREK1-216ENST00000612404 OR6B3Q8NGW1 331 aa18.72■□□□□ 0.59
SREK1-216ENST00000612404 NRDE2Q9H7Z3 1164 aa18.72■□□□□ 0.59
SREK1-216ENST00000612404 HCSTQ9UBK5 93 aa18.72■□□□□ 0.59
SREK1-216ENST00000612404 PPP2R2CQ9Y2T4 447 aa18.72■□□□□ 0.59
SREK1-216ENST00000612404 PRG3Q9Y2Y8 225 aaPredicted RBP18.72■□□□□ 0.59
SREK1-216ENST00000612404 FNDC1Q4ZHG4 1894 aaPredicted RBP18.72■□□□□ 0.59
SREK1-216ENST00000612404 I3L4J1 428 aa18.71■□□□□ 0.59
SREK1-216ENST00000612404 THAP12O43422 761 aa18.71■□□□□ 0.59
SREK1-216ENST00000612404 DGKIO75912 1065 aa18.71■□□□□ 0.59
SREK1-216ENST00000612404 KIF4AO95239 1232 aa18.71■□□□□ 0.59
SREK1-216ENST00000612404 MMEP08473 750 aa18.71■□□□□ 0.59
SREK1-216ENST00000612404 BMS1Q14692 1282 aaKnown RBP18.71■□□□□ 0.59
SREK1-216ENST00000612404 ADGRF2Q8IZF7 708 aa18.71■□□□□ 0.59
SREK1-216ENST00000612404 LRRC43Q8N309 656 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms