RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 MFSD14AQ96MC6 490 aa6.73□□□□□ -1.33
SNX13-213ENST00000611725 SLC5A4Q9NY91 659 aa6.73□□□□□ -1.33
SNX13-213ENST00000611725 GGA2Q9UJY4 613 aa6.73□□□□□ -1.33
SNX13-213ENST00000611725 PMM2O15305 246 aa6.73□□□□□ -1.33
SNX13-213ENST00000611725 LSM8O95777 96 aaKnown RBP6.73□□□□□ -1.33
SNX13-213ENST00000611725 MAP2K2P36507 400 aa6.73□□□□□ -1.33
SNX13-213ENST00000611725 NLRP11P59045 1033 aaKnown RBP6.73□□□□□ -1.33
SNX13-213ENST00000611725 MFSD7Q6UXD7 560 aa6.73□□□□□ -1.33
SNX13-213ENST00000611725 SERPINB12Q96P63 405 aa6.73□□□□□ -1.33
SNX13-213ENST00000611725 TGS1Q96RS0 853 aaKnown RBP6.73□□□□□ -1.33
SNX13-213ENST00000611725 SPATC1LQ9H0A9 340 aa6.73□□□□□ -1.33
SNX13-213ENST00000611725 TRABDQ9H4I3 376 aa6.73□□□□□ -1.33
SNX13-213ENST00000611725 LRRC19Q9H756 370 aa6.73□□□□□ -1.33
SNX13-213ENST00000611725 ERVK-5Q9HDB9 667 aa6.73□□□□□ -1.33
SNX13-213ENST00000611725 PNMA3Q9UL41 463 aa6.73□□□□□ -1.33
SNX13-213ENST00000611725 TPX2Q9ULW0 747 aaKnown RBP6.73□□□□□ -1.33
SNX13-213ENST00000611725 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.73□□□□□ -1.33
SNX13-213ENST00000611725 AHDC1Q5TGY3 1603 aaPredicted RBP6.73□□□□□ -1.33
SNX13-213ENST00000611725 MAGEB2O15479 319 aa6.73□□□□□ -1.33
SNX13-213ENST00000611725 PGK2P07205 417 aa6.73□□□□□ -1.33
SNX13-213ENST00000611725 ARL4AP40617 200 aa6.73□□□□□ -1.33
SNX13-213ENST00000611725 E2F5Q15329 346 aa6.73□□□□□ -1.33
SNX13-213ENST00000611725 CATSPERGQ6ZRH7 1159 aa6.73□□□□□ -1.33
SNX13-213ENST00000611725 SPATA21Q7Z572 469 aa6.73□□□□□ -1.33
SNX13-213ENST00000611725 ANKRD13AQ8IZ07 590 aa6.73□□□□□ -1.33
SNX13-213ENST00000611725 C4orf33Q8N1A6 199 aa6.73□□□□□ -1.33
SNX13-213ENST00000611725 BORCS6Q96GS4 357 aa6.73□□□□□ -1.33
SNX13-213ENST00000611725 MTFR1LQ9H019 292 aa6.73□□□□□ -1.33
SNX13-213ENST00000611725 WHRNQ9P202 907 aa6.73□□□□□ -1.33
SNX13-213ENST00000611725 SNX9Q9Y5X1 595 aa6.73□□□□□ -1.33
SNX13-213ENST00000611725 MYPNQ86TC9 1320 aa6.73□□□□□ -1.33
SNX13-213ENST00000611725 A0A0B4J269 797 aa6.73□□□□□ -1.33
SNX13-213ENST00000611725 ACKR2O00590 384 aa6.73□□□□□ -1.33
SNX13-213ENST00000611725 TRAPPC3O43617 180 aa6.73□□□□□ -1.33
SNX13-213ENST00000611725 CALCAP01258 141 aa6.73□□□□□ -1.33
SNX13-213ENST00000611725 FLT3P36888 993 aa6.73□□□□□ -1.33
SNX13-213ENST00000611725 R3HDM1Q15032 1099 aaKnown RBP6.73□□□□□ -1.33
SNX13-213ENST00000611725 KLHL38Q2WGJ6 581 aa6.73□□□□□ -1.33
SNX13-213ENST00000611725 SPDYCQ5MJ68 293 aa6.73□□□□□ -1.33
SNX13-213ENST00000611725 ZC3H18Q86VM9 953 aaKnown RBP6.73□□□□□ -1.33
SNX13-213ENST00000611725 PDGFDQ9GZP0 370 aaPredicted RBP6.73□□□□□ -1.33
SNX13-213ENST00000611725 ERAP1Q9NZ08 941 aa6.73□□□□□ -1.33
SNX13-213ENST00000611725 RNF181Q9P0P0 153 aa6.73□□□□□ -1.33
SNX13-213ENST00000611725 NUB1Q9Y5A7 615 aa6.73□□□□□ -1.33
SNX13-213ENST00000611725 HEY1Q9Y5J3 304 aa6.73□□□□□ -1.33
SNX13-213ENST00000611725 LRP5O75197 1615 aa6.73□□□□□ -1.33
SNX13-213ENST00000611725 FAM47DPA6NHR8 397 aa6.73□□□□□ -1.33
SNX13-213ENST00000611725 RIPK2O43353 540 aa6.73□□□□□ -1.33
SNX13-213ENST00000611725 ERO1BQ86YB8 467 aa6.73□□□□□ -1.33
SNX13-213ENST00000611725 WDR49Q8IV35 697 aa6.73□□□□□ -1.33
SNX13-213ENST00000611725 ACSF2Q96CM8 615 aaPredicted RBP6.73□□□□□ -1.33
SNX13-213ENST00000611725 KLRG1Q96E93 195 aa6.73□□□□□ -1.33
SNX13-213ENST00000611725 TSNARE1Q96NA8 513 aa6.73□□□□□ -1.33
SNX13-213ENST00000611725 TCP11X1B4DZS4 312 aa6.72□□□□□ -1.33
SNX13-213ENST00000611725 CAPN9O14815 690 aa6.72□□□□□ -1.33
SNX13-213ENST00000611725 HADHBP55084 474 aaKnown RBP6.72□□□□□ -1.33
SNX13-213ENST00000611725 NOMO3P69849 1222 aa6.72□□□□□ -1.33
SNX13-213ENST00000611725 RBP5P82980 135 aa6.72□□□□□ -1.33
SNX13-213ENST00000611725 PDE1BQ01064 536 aa6.72□□□□□ -1.33
SNX13-213ENST00000611725 CCDC14Q49A88 953 aa6.72□□□□□ -1.33
SNX13-213ENST00000611725 KCNT1Q5JUK3 1230 aa6.72□□□□□ -1.33
SNX13-213ENST00000611725 LLGL2Q6P1M3 1020 aa6.72□□□□□ -1.33
SNX13-213ENST00000611725 EMC1Q8N766 993 aa6.72□□□□□ -1.33
SNX13-213ENST00000611725 DCLK3Q9C098 648 aa6.72□□□□□ -1.33
SNX13-213ENST00000611725 SMG5Q9UPR3 1016 aaKnown RBP6.72□□□□□ -1.33
SNX13-213ENST00000611725 USP15Q9Y4E8 981 aaPredicted RBP6.72□□□□□ -1.33
SNX13-213ENST00000611725 SPATA31C2B4DYI2 1134 aa6.72□□□□□ -1.33
SNX13-213ENST00000611725 KRT38O76015 456 aa6.72□□□□□ -1.33
SNX13-213ENST00000611725 CAPSQ13938 189 aa6.72□□□□□ -1.33
SNX13-213ENST00000611725 CCDC62Q6P9F0 684 aa6.72□□□□□ -1.33
SNX13-213ENST00000611725 B3GNT9Q6UX72 402 aa6.72□□□□□ -1.33
SNX13-213ENST00000611725 PPFIBP2Q8ND30 876 aa6.72□□□□□ -1.33
SNX13-213ENST00000611725 ZSWIM2Q8NEG5 633 aa6.72□□□□□ -1.33
SNX13-213ENST00000611725 THOC1Q96FV9 657 aaKnown RBP6.72□□□□□ -1.33
SNX13-213ENST00000611725 FBXL18Q96ME1 805 aa6.72□□□□□ -1.33
SNX13-213ENST00000611725 TACO1Q9BSH4 297 aaKnown RBP6.72□□□□□ -1.33
SNX13-213ENST00000611725 ETNK1Q9HBU6 452 aa6.72□□□□□ -1.33
SNX13-213ENST00000611725 ARL2BPQ9Y2Y0 163 aa6.72□□□□□ -1.33
SNX13-213ENST00000611725 ATP8B3O60423 1300 aa6.72□□□□□ -1.33
SNX13-213ENST00000611725 ZMYM2Q9UBW7 1377 aa6.72□□□□□ -1.33
SNX13-213ENST00000611725 CCT8L1PA6NM43 557 aa6.72□□□□□ -1.33
SNX13-213ENST00000611725 ASS1P00966 412 aaKnown RBP6.72□□□□□ -1.33
SNX13-213ENST00000611725 KCNA2P16389 499 aa6.72□□□□□ -1.33
SNX13-213ENST00000611725 SLC26A2P50443 739 aa6.72□□□□□ -1.33
SNX13-213ENST00000611725 PEX5P50542 639 aa6.72□□□□□ -1.33
SNX13-213ENST00000611725 AUHQ13825 339 aaKnown RBP6.72□□□□□ -1.33
SNX13-213ENST00000611725 STILQ15468 1287 aa6.72□□□□□ -1.33
SNX13-213ENST00000611725 BOLA3Q53S33 107 aa6.72□□□□□ -1.33
SNX13-213ENST00000611725 TTC27Q6P3X3 843 aa6.72□□□□□ -1.33
SNX13-213ENST00000611725 ABHD15Q6UXT9 468 aa6.72□□□□□ -1.33
SNX13-213ENST00000611725 SUGP1Q8IWZ8 645 aaKnown RBP6.72□□□□□ -1.33
SNX13-213ENST00000611725 SREK1Q8WXA9 508 aaKnown RBP6.72□□□□□ -1.33
SNX13-213ENST00000611725 HSPH1Q92598 858 aa6.72□□□□□ -1.33
SNX13-213ENST00000611725 ATP2A3Q93084 1043 aa6.72□□□□□ -1.33
SNX13-213ENST00000611725 PRMT1Q99873 361 aaKnown RBP6.72□□□□□ -1.33
SNX13-213ENST00000611725 SYNJ2BP-COX16A0A087WUM0 186 aa6.72□□□□□ -1.33
SNX13-213ENST00000611725 F8VP50 259 aa6.72□□□□□ -1.33
SNX13-213ENST00000611725 GJB6O95452 261 aa6.72□□□□□ -1.33
SNX13-213ENST00000611725 PECAM1P16284 738 aaPredicted RBP6.72□□□□□ -1.33
SNX13-213ENST00000611725 RNASELQ05823 741 aaKnown RBP6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms