RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 ATP6V1G3Q96LB4 118 aa14.47□□□□□ -0.09
NEK3-205ENST00000610828 CAPS2Q9BXY5 557 aa14.47□□□□□ -0.09
NEK3-205ENST00000610828 LRRC19Q9H756 370 aa14.47□□□□□ -0.09
NEK3-205ENST00000610828 POLIQ9UNA4 740 aa14.47□□□□□ -0.09
NEK3-205ENST00000610828 SLC45A1Q9Y2W3 748 aa14.47□□□□□ -0.09
NEK3-205ENST00000610828 NFS1Q9Y697 457 aa14.47□□□□□ -0.09
NEK3-205ENST00000610828 ANK1P16157 1881 aa14.47□□□□□ -0.09
NEK3-205ENST00000610828 H3BRB1 525 aa14.47□□□□□ -0.09
NEK3-205ENST00000610828 STAG3L1P0CL83 205 aa14.47□□□□□ -0.09
NEK3-205ENST00000610828 GCLCP48506 637 aaPredicted RBP14.47□□□□□ -0.09
NEK3-205ENST00000610828 RPL7AP62424 266 aaKnown RBP14.47□□□□□ -0.09
NEK3-205ENST00000610828 SNX1Q13596 522 aa14.47□□□□□ -0.09
NEK3-205ENST00000610828 WDR72Q3MJ13 1102 aa14.47□□□□□ -0.09
NEK3-205ENST00000610828 ZDHHC24Q6UX98 284 aa14.47□□□□□ -0.09
NEK3-205ENST00000610828 GPR142Q7Z601 462 aa14.47□□□□□ -0.09
NEK3-205ENST00000610828 RHOT1Q8IXI2 618 aa14.47□□□□□ -0.09
NEK3-205ENST00000610828 TMEM130Q8N3G9 435 aa14.47□□□□□ -0.09
NEK3-205ENST00000610828 C12orf50Q8NA57 414 aaPredicted RBP14.47□□□□□ -0.09
NEK3-205ENST00000610828 TMEM35BQ8NCS4 154 aa14.47□□□□□ -0.09
NEK3-205ENST00000610828 SCLT1Q96NL6 688 aa14.47□□□□□ -0.09
NEK3-205ENST00000610828 C16orf70Q9BSU1 422 aa14.47□□□□□ -0.09
NEK3-205ENST00000610828 KATNBL1Q9H079 304 aa14.47□□□□□ -0.09
NEK3-205ENST00000610828 TUT1Q9H6E5 874 aaKnown RBP14.47□□□□□ -0.09
NEK3-205ENST00000610828 GRHL1Q9NZI5 618 aa14.47□□□□□ -0.09
NEK3-205ENST00000610828 PASKQ96RG2 1323 aa14.46□□□□□ -0.09
NEK3-205ENST00000610828 RBM47A0AV96 593 aaKnown RBP14.46□□□□□ -0.09
NEK3-205ENST00000610828 LACTBL1A8MY62 500 aa14.46□□□□□ -0.09
NEK3-205ENST00000610828 PSTPIP1O43586 416 aa14.46□□□□□ -0.09
NEK3-205ENST00000610828 SHOX2O60902 331 aaPredicted RBP14.46□□□□□ -0.09
NEK3-205ENST00000610828 PPFIA2O75334 1257 aa14.46□□□□□ -0.09
NEK3-205ENST00000610828 ECEL1O95672 775 aa14.46□□□□□ -0.09
NEK3-205ENST00000610828 LSM8O95777 96 aaKnown RBP14.46□□□□□ -0.09
NEK3-205ENST00000610828 RAP1GAPP47736 663 aa14.46□□□□□ -0.09
NEK3-205ENST00000610828 ATP1A2P50993 1020 aa14.46□□□□□ -0.09
NEK3-205ENST00000610828 TAS2R40P59535 323 aa14.46□□□□□ -0.09
NEK3-205ENST00000610828 LACTBP83111 547 aaPredicted RBP14.46□□□□□ -0.09
NEK3-205ENST00000610828 POU5F1BQ06416 359 aa14.46□□□□□ -0.09
NEK3-205ENST00000610828 ZNF844Q08AG5 666 aa14.46□□□□□ -0.09
NEK3-205ENST00000610828 PPP1R7Q15435 360 aa14.46□□□□□ -0.09
NEK3-205ENST00000610828 TTC19Q6DKK2 380 aaPredicted RBP14.46□□□□□ -0.09
NEK3-205ENST00000610828 LRRC31Q6UY01 552 aa14.46□□□□□ -0.09
NEK3-205ENST00000610828 LINC01465Q8N7H1 131 aa14.46□□□□□ -0.09
NEK3-205ENST00000610828 NLRP7Q8WX94 980 aa14.46□□□□□ -0.09
NEK3-205ENST00000610828 ATG4AQ8WYN0 398 aa14.46□□□□□ -0.09
NEK3-205ENST00000610828 TFAP2BQ92481 460 aa14.46□□□□□ -0.09
NEK3-205ENST00000610828 EMID1Q96A84 441 aaPredicted RBP14.46□□□□□ -0.09
NEK3-205ENST00000610828 HEMGNQ9BXL5 484 aa14.46□□□□□ -0.09
NEK3-205ENST00000610828 TMBIM4Q9HC24 238 aa14.46□□□□□ -0.09
NEK3-205ENST00000610828 UNCXA6NJT0 531 aa14.46□□□□□ -0.1
NEK3-205ENST00000610828 ZEB2O60315 1214 aa14.46□□□□□ -0.1
NEK3-205ENST00000610828 PPFIA4O75335 1185 aa14.46□□□□□ -0.1
NEK3-205ENST00000610828 CALB1P05937 261 aa14.46□□□□□ -0.1
NEK3-205ENST00000610828 AMHR2Q16671 573 aa14.46□□□□□ -0.1
NEK3-205ENST00000610828 FAM187BQ17R55 369 aa14.46□□□□□ -0.1
NEK3-205ENST00000610828 ZNF667Q5HYK9 610 aa14.46□□□□□ -0.1
NEK3-205ENST00000610828 JADE1Q6IE81 842 aa14.46□□□□□ -0.1
NEK3-205ENST00000610828 MTHFD1LQ6UB35 978 aa14.46□□□□□ -0.1
NEK3-205ENST00000610828 ZNF467Q7Z7K2 595 aaPredicted RBP14.46□□□□□ -0.1
NEK3-205ENST00000610828 ANKRD23Q86SG2 305 aa14.46□□□□□ -0.1
NEK3-205ENST00000610828 C1orf127Q8N9H9 656 aa14.46□□□□□ -0.1
NEK3-205ENST00000610828 MAIP1Q8WWC4 291 aa14.46□□□□□ -0.1
NEK3-205ENST00000610828 HERPUD2Q9BSE4 406 aa14.46□□□□□ -0.1
NEK3-205ENST00000610828 PDZD7Q9H5P4 517 aa14.46□□□□□ -0.1
NEK3-205ENST00000610828 CHST7Q9NS84 486 aa14.46□□□□□ -0.1
NEK3-205ENST00000610828 CALCOCO1Q9P1Z2 691 aa14.46□□□□□ -0.1
NEK3-205ENST00000610828 MORF4L1Q9UBU8 362 aa14.46□□□□□ -0.1
NEK3-205ENST00000610828 PARP2Q9UGN5 583 aa14.46□□□□□ -0.1
NEK3-205ENST00000610828 SIX4Q9UIU6 781 aa14.46□□□□□ -0.1
NEK3-205ENST00000610828 CEP83Q9Y592 693 aa14.46□□□□□ -0.1
NEK3-205ENST00000610828 HMGB1P1B2RPK0 211 aaPredicted RBP14.45□□□□□ -0.1
NEK3-205ENST00000610828 ITGB3P05106 788 aa14.45□□□□□ -0.1
NEK3-205ENST00000610828 MCF2P10911 925 aa14.45□□□□□ -0.1
NEK3-205ENST00000610828 CD19P15391 556 aa14.45□□□□□ -0.1
NEK3-205ENST00000610828 ARF4P18085 180 aaPredicted RBP14.45□□□□□ -0.1
NEK3-205ENST00000610828 GBP1P32455 592 aa14.45□□□□□ -0.1
NEK3-205ENST00000610828 CDH8P55286 799 aa14.45□□□□□ -0.1
NEK3-205ENST00000610828 YWHAEP62258 255 aaKnown RBP14.45□□□□□ -0.1
NEK3-205ENST00000610828 TNFAIP2Q03169 654 aa14.45□□□□□ -0.1
NEK3-205ENST00000610828 DNAJC24Q6P3W2 148 aa14.45□□□□□ -0.1
NEK3-205ENST00000610828 MAML3Q96JK9 1138 aa14.45□□□□□ -0.1
NEK3-205ENST00000610828 MCEEQ96PE7 176 aa14.45□□□□□ -0.1
NEK3-205ENST00000610828 MTRF1LQ9UGC7 380 aaKnown RBP14.45□□□□□ -0.1
NEK3-205ENST00000610828 IP6K2Q9UHH9 426 aa14.45□□□□□ -0.1
NEK3-205ENST00000610828 RPS6KA5O75582 802 aa14.45□□□□□ -0.1
NEK3-205ENST00000610828 ECM2O94769 699 aaPredicted RBP14.45□□□□□ -0.1
NEK3-205ENST00000610828 RALAP11233 206 aa14.45□□□□□ -0.1
NEK3-205ENST00000610828 SMPD1P17405 629 aa14.45□□□□□ -0.1
NEK3-205ENST00000610828 NR1D1P20393 614 aa14.45□□□□□ -0.1
NEK3-205ENST00000610828 PMS2P54278 862 aa14.45□□□□□ -0.1
NEK3-205ENST00000610828 GNGT1P63211 74 aa14.45□□□□□ -0.1
NEK3-205ENST00000610828 KRT17Q04695 432 aa14.45□□□□□ -0.1
NEK3-205ENST00000610828 IFFO1Q0D2I5 559 aa14.45□□□□□ -0.1
NEK3-205ENST00000610828 SKIDA1Q1XH10 827 aa14.45□□□□□ -0.1
NEK3-205ENST00000610828 ZFYVE27Q5T4F4 411 aa14.45□□□□□ -0.1
NEK3-205ENST00000610828 DCUN1D2Q6PH85 259 aa14.45□□□□□ -0.1
NEK3-205ENST00000610828 ERICH1Q86X53 443 aa14.45□□□□□ -0.1
NEK3-205ENST00000610828 TXLNGYQ9BZA5 131 aa14.45□□□□□ -0.1
NEK3-205ENST00000610828 ZNF518BQ9C0D4 1074 aa14.45□□□□□ -0.1
NEK3-205ENST00000610828 BCCIPQ9P287 314 aaKnown RBP eCLIP14.45□□□□□ -0.1
NEK3-205ENST00000610828 COL1A2P08123 1366 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms