RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 ANKMY2Q8IV38 441 aa7.67□□□□□ -1.18
CSDE1-218ENST00000610726 EMC1Q8N766 993 aa7.67□□□□□ -1.18
CSDE1-218ENST00000610726 CCDC197Q8NCU1 140 aa7.67□□□□□ -1.18
CSDE1-218ENST00000610726 GCNAQ96QF7 691 aa7.67□□□□□ -1.18
CSDE1-218ENST00000610726 PDGFCQ9NRA1 345 aa7.67□□□□□ -1.18
CSDE1-218ENST00000610726 COL20A1Q9P218 1284 aa7.67□□□□□ -1.18
CSDE1-218ENST00000610726 VAV3Q9UKW4 847 aa7.67□□□□□ -1.18
CSDE1-218ENST00000610726 INTUQ9ULD6 942 aa7.67□□□□□ -1.18
CSDE1-218ENST00000610726 A0A0U1RQJ8 604 aa7.66□□□□□ -1.18
CSDE1-218ENST00000610726 ANKRD65E5RJM6 399 aa7.66□□□□□ -1.18
CSDE1-218ENST00000610726 PFDN6O15212 129 aa7.66□□□□□ -1.18
CSDE1-218ENST00000610726 PHF2O75151 1096 aa7.66□□□□□ -1.18
CSDE1-218ENST00000610726 KRT37O76014 449 aa7.66□□□□□ -1.18
CSDE1-218ENST00000610726 RBP3P10745 1247 aa7.66□□□□□ -1.18
CSDE1-218ENST00000610726 GLRA2P23416 452 aa7.66□□□□□ -1.18
CSDE1-218ENST00000610726 TSTA3Q13630 321 aaPredicted RBP7.66□□□□□ -1.18
CSDE1-218ENST00000610726 PSMD6Q15008 389 aa7.66□□□□□ -1.18
CSDE1-218ENST00000610726 P3H1Q32P28 736 aa7.66□□□□□ -1.18
CSDE1-218ENST00000610726 CELF3Q5SZQ8 465 aaKnown RBP7.66□□□□□ -1.18
CSDE1-218ENST00000610726 FAM47EQ6ZV65 393 aa7.66□□□□□ -1.18
CSDE1-218ENST00000610726 MYLK4Q86YV6 388 aaPredicted RBP7.66□□□□□ -1.18
CSDE1-218ENST00000610726 WDR49Q8IV35 697 aa7.66□□□□□ -1.18
CSDE1-218ENST00000610726 SPATA20Q8TB22 786 aa7.66□□□□□ -1.18
CSDE1-218ENST00000610726 ATG4AQ8WYN0 398 aa7.66□□□□□ -1.18
CSDE1-218ENST00000610726 TTC17Q96AE7 1141 aa7.66□□□□□ -1.18
CSDE1-218ENST00000610726 MED15Q96RN5 788 aa7.66□□□□□ -1.18
CSDE1-218ENST00000610726 FSD1LQ9BXM9 530 aa7.66□□□□□ -1.18
CSDE1-218ENST00000610726 PORCNQ9H237 461 aa7.66□□□□□ -1.18
CSDE1-218ENST00000610726 CARD9Q9H257 536 aa7.66□□□□□ -1.18
CSDE1-218ENST00000610726 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.66□□□□□ -1.187e-7■□□□□ 9.9
CSDE1-218ENST00000610726 AIPL1Q9NZN9 384 aa7.66□□□□□ -1.18
CSDE1-218ENST00000610726 ASTN1O14525 1302 aa7.66□□□□□ -1.18
CSDE1-218ENST00000610726 GLTPD2A6NH11 291 aa7.66□□□□□ -1.18
CSDE1-218ENST00000610726 LRRIQ3A6PVS8 624 aaPredicted RBP7.66□□□□□ -1.18
CSDE1-218ENST00000610726 ZC3H11AO75152 810 aaKnown RBP eCLIP7.66□□□□□ -1.185e-6■□□□□ 9.7
CSDE1-218ENST00000610726 CCNE2O96020 404 aa7.66□□□□□ -1.18
CSDE1-218ENST00000610726 APOEP02649 317 aa7.66□□□□□ -1.18
CSDE1-218ENST00000610726 GZMAP12544 262 aa7.66□□□□□ -1.18
CSDE1-218ENST00000610726 HSD17B4P51659 736 aa7.66□□□□□ -1.18
CSDE1-218ENST00000610726 SESN2P58004 480 aaPredicted RBP7.66□□□□□ -1.18
CSDE1-218ENST00000610726 TPI1P60174 286 aa7.66□□□□□ -1.18
CSDE1-218ENST00000610726 CAV1Q03135 178 aa7.66□□□□□ -1.18
CSDE1-218ENST00000610726 RRP1BQ14684 758 aaKnown RBP7.66□□□□□ -1.18
CSDE1-218ENST00000610726 HSDL1Q3SXM5 330 aa7.66□□□□□ -1.18
CSDE1-218ENST00000610726 SH2D3CQ8N5H7 860 aa7.66□□□□□ -1.18
CSDE1-218ENST00000610726 TMEM161BQ8NDZ6 487 aa7.66□□□□□ -1.18
CSDE1-218ENST00000610726 OR2W6PQ8NHA6 318 aa7.66□□□□□ -1.18
CSDE1-218ENST00000610726 SLC7A14Q8TBB6 771 aa7.66□□□□□ -1.18
CSDE1-218ENST00000610726 SPATA18Q8TC71 538 aa7.66□□□□□ -1.18
CSDE1-218ENST00000610726 ZC3H15Q8WU90 426 aaKnown RBP7.66□□□□□ -1.18
CSDE1-218ENST00000610726 SEPT5Q99719 369 aaPredicted RBP7.66□□□□□ -1.18
CSDE1-218ENST00000610726 CNOT10Q9H9A5 744 aaKnown RBP7.66□□□□□ -1.18
CSDE1-218ENST00000610726 RAB6BQ9NRW1 208 aa7.66□□□□□ -1.18
CSDE1-218ENST00000610726 SIK3Q9Y2K2 1263 aa7.66□□□□□ -1.18
CSDE1-218ENST00000610726 FIS1Q9Y3D6 152 aa7.66□□□□□ -1.18
CSDE1-218ENST00000610726 TIMM13Q9Y5L4 95 aaPredicted RBP7.66□□□□□ -1.18
CSDE1-218ENST00000610726 IQANK1A0A1B0GTG1 560 aa7.66□□□□□ -1.18
CSDE1-218ENST00000610726 DDX3XO00571 662 aaKnown RBP eCLIP7.66□□□□□ -1.186e-27■■■□□ 16.5
CSDE1-218ENST00000610726 SH3BP5O60239 455 aa7.66□□□□□ -1.18
CSDE1-218ENST00000610726 PLA2G6O60733 806 aa7.66□□□□□ -1.18
CSDE1-218ENST00000610726 CALCAP01258 141 aa7.66□□□□□ -1.18
CSDE1-218ENST00000610726 KRT10P13645 584 aa7.66□□□□□ -1.18
CSDE1-218ENST00000610726 PMLP29590 882 aa7.66□□□□□ -1.18
CSDE1-218ENST00000610726 DEUP1Q05D60 604 aa7.66□□□□□ -1.18
CSDE1-218ENST00000610726 BYSLQ13895 437 aaKnown RBP7.66□□□□□ -1.18
CSDE1-218ENST00000610726 MGAT5BQ3V5L5 792 aa7.66□□□□□ -1.18
CSDE1-218ENST00000610726 LBX2Q6XYB7 198 aa7.66□□□□□ -1.18
CSDE1-218ENST00000610726 ZNF606Q8WXB4 792 aa7.66□□□□□ -1.18
CSDE1-218ENST00000610726 L3MBTL3Q96JM7 780 aaPredicted RBP7.66□□□□□ -1.18
CSDE1-218ENST00000610726 INPP4AQ96PE3 977 aaPredicted RBP7.66□□□□□ -1.18
CSDE1-218ENST00000610726 PLEKHA5Q9HAU0 1116 aa7.66□□□□□ -1.18
CSDE1-218ENST00000610726 ABI2Q9NYB9 513 aaPredicted RBP7.66□□□□□ -1.18
CSDE1-218ENST00000610726 DONSONQ9NYP3 566 aa7.66□□□□□ -1.18
CSDE1-218ENST00000610726 DMGDHQ9UI17 866 aaKnown RBP7.66□□□□□ -1.18
CSDE1-218ENST00000610726 SETD1AO15047 1707 aaKnown RBP7.66□□□□□ -1.18
CSDE1-218ENST00000610726 CCDC78A2IDD5 438 aa7.66□□□□□ -1.18
CSDE1-218ENST00000610726 SPATA31C2B4DYI2 1134 aa7.66□□□□□ -1.18
CSDE1-218ENST00000610726 DFFAO00273 331 aa7.66□□□□□ -1.18
CSDE1-218ENST00000610726 C2CD2LO14523 706 aa7.66□□□□□ -1.18
CSDE1-218ENST00000610726 ATP9BO43861 1147 aa7.66□□□□□ -1.18
CSDE1-218ENST00000610726 GHRP10912 638 aa7.66□□□□□ -1.18
CSDE1-218ENST00000610726 NCAM1P13591 858 aa7.66□□□□□ -1.18
CSDE1-218ENST00000610726 BRAFP15056 766 aa7.66□□□□□ -1.18
CSDE1-218ENST00000610726 GPD1P21695 349 aa7.66□□□□□ -1.18
CSDE1-218ENST00000610726 JAG1P78504 1218 aa7.66□□□□□ -1.18
CSDE1-218ENST00000610726 LRRC14Q15048 493 aa7.66□□□□□ -1.18
CSDE1-218ENST00000610726 SLC35G1Q2M3R5 365 aa7.66□□□□□ -1.18
CSDE1-218ENST00000610726 MIIPQ5JXC2 388 aa7.66□□□□□ -1.18
CSDE1-218ENST00000610726 CXCL17Q6UXB2 119 aa7.66□□□□□ -1.18
CSDE1-218ENST00000610726 ZPBP2Q6X784 338 aa7.66□□□□□ -1.18
CSDE1-218ENST00000610726 SLC13A5Q86YT5 568 aaPredicted RBP7.66□□□□□ -1.18
CSDE1-218ENST00000610726 RBM15Q96T37 977 aaKnown RBP eCLIP7.66□□□□□ -1.183e-7■■■■□ 23.4
CSDE1-218ENST00000610726 PNKPQ96T60 521 aa7.66□□□□□ -1.18
CSDE1-218ENST00000610726 EPAS1Q99814 870 aa7.66□□□□□ -1.18
CSDE1-218ENST00000610726 ZSWIM1Q9BR11 485 aa7.66□□□□□ -1.18
CSDE1-218ENST00000610726 BFARQ9NZS9 450 aa7.66□□□□□ -1.18
CSDE1-218ENST00000610726 CASTOR2A6NHX0 329 aa7.65□□□□□ -1.18
CSDE1-218ENST00000610726 ARHGAP42A6NI28 874 aa7.65□□□□□ -1.18
CSDE1-218ENST00000610726 CYB561D2O14569 222 aa7.65□□□□□ -1.18
CSDE1-218ENST00000610726 GPR182O15218 404 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms