RNA–Protein interactions for RNA: ENST00000608903.5

CTCFL-221, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-221ENST00000608903 TWNKQ96RR1 684 aa12.38□□□□□ -0.43
CTCFL-221ENST00000608903 ZSWIM1Q9BR11 485 aa12.38□□□□□ -0.43
CTCFL-221ENST00000608903 MRPL45Q9BRJ2 306 aaKnown RBP12.38□□□□□ -0.43
CTCFL-221ENST00000608903 NHEJ1Q9H9Q4 299 aaPredicted RBP12.38□□□□□ -0.43
CTCFL-221ENST00000608903 CISHQ9NSE2 258 aa12.38□□□□□ -0.43
CTCFL-221ENST00000608903 SLC38A7Q9NVC3 462 aa12.38□□□□□ -0.43
CTCFL-221ENST00000608903 REXO2Q9Y3B8 237 aaKnown RBP12.38□□□□□ -0.43
CTCFL-221ENST00000608903 DAAM1Q9Y4D1 1078 aa12.38□□□□□ -0.43
CTCFL-221ENST00000608903 ABHD14A-ACY1A0A1B0GW23 586 aa12.37□□□□□ -0.43
CTCFL-221ENST00000608903 PODXLO00592 558 aa12.37□□□□□ -0.43
CTCFL-221ENST00000608903 SERPING1P05155 500 aa12.37□□□□□ -0.43
CTCFL-221ENST00000608903 CD58P19256 250 aa12.37□□□□□ -0.43
CTCFL-221ENST00000608903 ZNF132P52740 706 aa12.37□□□□□ -0.43
CTCFL-221ENST00000608903 ORC1Q13415 861 aa12.37□□□□□ -0.43
CTCFL-221ENST00000608903 TUSC3Q13454 348 aa12.37□□□□□ -0.43
CTCFL-221ENST00000608903 SOWAHAQ2M3V2 549 aa12.37□□□□□ -0.43
CTCFL-221ENST00000608903 CYP26C1Q6V0L0 522 aa12.37□□□□□ -0.43
CTCFL-221ENST00000608903 ENOSF1Q7L5Y1 443 aa12.37□□□□□ -0.43
CTCFL-221ENST00000608903 NOP9Q86U38 636 aaKnown RBP12.37□□□□□ -0.43
CTCFL-221ENST00000608903 TMTC1Q8IUR5 882 aa12.37□□□□□ -0.43
CTCFL-221ENST00000608903 REXO1L1PQ8IX06 675 aa12.37□□□□□ -0.43
CTCFL-221ENST00000608903 DESI2Q9BSY9 194 aa12.37□□□□□ -0.43
CTCFL-221ENST00000608903 IMPG2Q9BZV3 1241 aa12.37□□□□□ -0.43
CTCFL-221ENST00000608903 NRDE2Q9H7Z3 1164 aa12.37□□□□□ -0.43
CTCFL-221ENST00000608903 PCDHB4Q9Y5E5 795 aa12.37□□□□□ -0.43
CTCFL-221ENST00000608903 SNX9Q9Y5X1 595 aa12.37□□□□□ -0.43
CTCFL-221ENST00000608903 KPNA7A9QM74 516 aa12.37□□□□□ -0.43
CTCFL-221ENST00000608903 I3L4J1 428 aa12.37□□□□□ -0.43
CTCFL-221ENST00000608903 XPOTO43592 962 aaKnown RBP12.37□□□□□ -0.43
CTCFL-221ENST00000608903 DGKIO75912 1065 aa12.37□□□□□ -0.43
CTCFL-221ENST00000608903 CLSTN1O94985 981 aa12.37□□□□□ -0.43
CTCFL-221ENST00000608903 CFHP08603 1231 aa12.37□□□□□ -0.43
CTCFL-221ENST00000608903 TBXAS1P24557 533 aaPredicted RBP12.37□□□□□ -0.43
CTCFL-221ENST00000608903 KLHL30Q0D2K2 578 aa12.37□□□□□ -0.43
CTCFL-221ENST00000608903 MAPK8IP2Q13387 824 aaPredicted RBP12.37□□□□□ -0.43
CTCFL-221ENST00000608903 PAN2Q504Q3 1202 aaKnown RBP12.37□□□□□ -0.43
CTCFL-221ENST00000608903 TMEM240Q5SV17 173 aa12.37□□□□□ -0.43
CTCFL-221ENST00000608903 TMEM270Q6UE05 265 aa12.37□□□□□ -0.43
CTCFL-221ENST00000608903 FAM43BQ6ZT52 329 aaPredicted RBP12.37□□□□□ -0.43
CTCFL-221ENST00000608903 DNAAF5Q86Y56 855 aa12.37□□□□□ -0.43
CTCFL-221ENST00000608903 PALB2Q86YC2 1186 aa12.37□□□□□ -0.43
CTCFL-221ENST00000608903 RPUSD2Q8IZ73 545 aaKnown RBP12.37□□□□□ -0.43
CTCFL-221ENST00000608903 LNX1Q8TBB1 728 aaPredicted RBP12.37□□□□□ -0.43
CTCFL-221ENST00000608903 DDX1Q92499 740 aaKnown RBP12.37□□□□□ -0.43
CTCFL-221ENST00000608903 ZNF592Q92610 1267 aa12.37□□□□□ -0.43
CTCFL-221ENST00000608903 TOP1MTQ969P6 601 aa12.37□□□□□ -0.43
CTCFL-221ENST00000608903 ELOVL4Q9GZR5 314 aa12.37□□□□□ -0.43
CTCFL-221ENST00000608903 NUCKS1Q9H1E3 243 aaKnown RBP12.37□□□□□ -0.43
CTCFL-221ENST00000608903 GDAP2Q9NXN4 497 aa12.37□□□□□ -0.43
CTCFL-221ENST00000608903 CXXC1Q9P0U4 656 aaPredicted RBP12.37□□□□□ -0.43
CTCFL-221ENST00000608903 NOCTQ9UK39 431 aaKnown RBP12.37□□□□□ -0.43
CTCFL-221ENST00000608903 LRFN2Q9ULH4 789 aa12.37□□□□□ -0.43
CTCFL-221ENST00000608903 FAM170AA1A519 330 aa12.36□□□□□ -0.43
CTCFL-221ENST00000608903 TBKBP1A7MCY6 615 aa12.36□□□□□ -0.43
CTCFL-221ENST00000608903 ARHGAP6O43182 974 aa12.36□□□□□ -0.43
CTCFL-221ENST00000608903 KRT5P13647 590 aa12.36□□□□□ -0.43
CTCFL-221ENST00000608903 FERP16591 822 aa12.36□□□□□ -0.43
CTCFL-221ENST00000608903 RPL9P32969 192 aaKnown RBP12.36□□□□□ -0.43
CTCFL-221ENST00000608903 BRCC3P46736 316 aa12.36□□□□□ -0.43
CTCFL-221ENST00000608903 TAF6P49848 677 aa12.36□□□□□ -0.43
CTCFL-221ENST00000608903 TIGD5Q53EQ6 642 aa12.36□□□□□ -0.43
CTCFL-221ENST00000608903 ZNF394Q53GI3 561 aa12.36□□□□□ -0.43
CTCFL-221ENST00000608903 FAM117BQ6P1L5 589 aa12.36□□□□□ -0.43
CTCFL-221ENST00000608903 OSTM1Q86WC4 334 aa12.36□□□□□ -0.43
CTCFL-221ENST00000608903 RBBP8NLQ8NC74 664 aaPredicted RBP12.36□□□□□ -0.43
CTCFL-221ENST00000608903 ACRBPQ8NEB7 543 aa12.36□□□□□ -0.43
CTCFL-221ENST00000608903 HASPINQ8TF76 798 aa12.36□□□□□ -0.43
CTCFL-221ENST00000608903 KBTBD7Q8WVZ9 684 aa12.36□□□□□ -0.43
CTCFL-221ENST00000608903 PCDHB18PQ96TA0 734 aa12.36□□□□□ -0.43
CTCFL-221ENST00000608903 LPIN3Q9BQK8 851 aa12.36□□□□□ -0.43
CTCFL-221ENST00000608903 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.36□□□□□ -0.432e-13■□□□□ 8.7
CTCFL-221ENST00000608903 RC3H2Q9HBD1 1191 aaKnown RBP12.36□□□□□ -0.43
CTCFL-221ENST00000608903 L1RE1Q9UN81 338 aa12.36□□□□□ -0.43
CTCFL-221ENST00000608903 A0A087X0T9 212 aa12.35□□□□□ -0.43
CTCFL-221ENST00000608903 DDX3XO00571 662 aaKnown RBP eCLIP12.35□□□□□ -0.438e-11■■■■□ 20.5
CTCFL-221ENST00000608903 NRDCO43847 1150 aa12.35□□□□□ -0.43
CTCFL-221ENST00000608903 KIF4AO95239 1232 aa12.35□□□□□ -0.43
CTCFL-221ENST00000608903 FAM228BP0C875 321 aa12.35□□□□□ -0.43
CTCFL-221ENST00000608903 SSTR3P32745 418 aaPredicted RBP12.35□□□□□ -0.43
CTCFL-221ENST00000608903 AARSP49588 968 aaKnown RBP eCLIP12.35□□□□□ -0.43
CTCFL-221ENST00000608903 RAD23BP54727 409 aa12.35□□□□□ -0.43
CTCFL-221ENST00000608903 FPGSQ05932 587 aa12.35□□□□□ -0.43
CTCFL-221ENST00000608903 DMTNQ08495 405 aa12.35□□□□□ -0.43
CTCFL-221ENST00000608903 MYO1EQ12965 1108 aa12.35□□□□□ -0.43
CTCFL-221ENST00000608903 TSR1Q2NL82 804 aaKnown RBP12.35□□□□□ -0.43
CTCFL-221ENST00000608903 SLC30A5Q8TAD4 765 aa12.35□□□□□ -0.43
CTCFL-221ENST00000608903 EPS8L1Q8TE68 723 aa12.35□□□□□ -0.43
CTCFL-221ENST00000608903 TFAP2BQ92481 460 aa12.35□□□□□ -0.43
CTCFL-221ENST00000608903 JAKMIP2Q96AA8 810 aa12.35□□□□□ -0.43
CTCFL-221ENST00000608903 ZNF689Q96CS4 500 aaPredicted RBP12.35□□□□□ -0.43
CTCFL-221ENST00000608903 MMS19Q96T76 1030 aa12.35□□□□□ -0.43
CTCFL-221ENST00000608903 ZNHIT6Q9NWK9 470 aaKnown RBP12.35□□□□□ -0.43
CTCFL-221ENST00000608903 NENFQ9UMX5 172 aa12.35□□□□□ -0.43
CTCFL-221ENST00000608903 TFR2Q9UP52 801 aa12.35□□□□□ -0.43
CTCFL-221ENST00000608903 EPN1Q9Y6I3 576 aaPredicted RBP12.35□□□□□ -0.43
CTCFL-221ENST00000608903 FANCGO15287 622 aa12.35□□□□□ -0.43
CTCFL-221ENST00000608903 CILPO75339 1184 aa12.35□□□□□ -0.43
CTCFL-221ENST00000608903 PFKMP08237 780 aa12.35□□□□□ -0.43
CTCFL-221ENST00000608903 CYP11B1P15538 503 aa12.35□□□□□ -0.43
CTCFL-221ENST00000608903 PBX3P40426 434 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms