RNA–Protein interactions for RNA: ENST00000604164.5

CCDC12-209, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 399 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-209ENST00000604164 CALUO43852 315 aaPredicted RBP12.45□□□□□ -0.42
CCDC12-209ENST00000604164 EXOC3O60645 756 aa12.45□□□□□ -0.42
CCDC12-209ENST00000604164 HUS1O60921 280 aa12.45□□□□□ -0.42
CCDC12-209ENST00000604164 RHOBTB3O94955 611 aa12.45□□□□□ -0.42
CCDC12-209ENST00000604164 ITGB3P05106 788 aa12.45□□□□□ -0.42
CCDC12-209ENST00000604164 KRT19P08727 400 aa12.45□□□□□ -0.42
CCDC12-209ENST00000604164 PTPN2P17706 415 aa12.45□□□□□ -0.42
CCDC12-209ENST00000604164 POLR2BP30876 1174 aaKnown RBP12.45□□□□□ -0.42
CCDC12-209ENST00000604164 CYP2J2P51589 502 aa12.45□□□□□ -0.42
CCDC12-209ENST00000604164 ADCY1Q08828 1119 aa12.45□□□□□ -0.42
CCDC12-209ENST00000604164 SIGLEC14Q08ET2 396 aa12.45□□□□□ -0.42
CCDC12-209ENST00000604164 GPR17Q13304 367 aa12.45□□□□□ -0.42
CCDC12-209ENST00000604164 KCNB1Q14721 858 aa12.45□□□□□ -0.42
CCDC12-209ENST00000604164 PABPC1LQ4VXU2 614 aaKnown RBP12.45□□□□□ -0.42
CCDC12-209ENST00000604164 IQCEQ6IPM2 695 aa12.45□□□□□ -0.42
CCDC12-209ENST00000604164 GRASPQ7Z6J2 395 aaPredicted RBP12.45□□□□□ -0.42
CCDC12-209ENST00000604164 CBWD2Q8IUF1 395 aa12.45□□□□□ -0.42
CCDC12-209ENST00000604164 TMEM86AQ8N2M4 240 aa12.45□□□□□ -0.42
CCDC12-209ENST00000604164 C1orf127Q8N9H9 656 aa12.45□□□□□ -0.42
CCDC12-209ENST00000604164 LEMD2Q8NC56 503 aa12.45□□□□□ -0.42
CCDC12-209ENST00000604164 C2orf15Q8WU43 125 aaKnown RBP12.45□□□□□ -0.42
CCDC12-209ENST00000604164 TMEM174Q8WUU8 243 aa12.45□□□□□ -0.42
CCDC12-209ENST00000604164 CHAMP1Q96JM3 812 aa12.45□□□□□ -0.42
CCDC12-209ENST00000604164 MFSD14AQ96MC6 490 aa12.45□□□□□ -0.42
CCDC12-209ENST00000604164 LRFN3Q9BTN0 628 aa12.45□□□□□ -0.42
CCDC12-209ENST00000604164 GDPD2Q9HCC8 539 aa12.45□□□□□ -0.42
CCDC12-209ENST00000604164 AVENQ9NQS1 362 aaPredicted RBP12.45□□□□□ -0.42
CCDC12-209ENST00000604164 INTS13Q9NVM9 706 aa12.45□□□□□ -0.42
CCDC12-209ENST00000604164 RMND1Q9NWS8 449 aa12.45□□□□□ -0.42
CCDC12-209ENST00000604164 AGAP1Q9UPQ3 857 aa12.45□□□□□ -0.42
CCDC12-209ENST00000604164 TIMM13Q9Y5L4 95 aaPredicted RBP12.45□□□□□ -0.42
CCDC12-209ENST00000604164 INSL5Q9Y5Q6 135 aa12.45□□□□□ -0.42
CCDC12-209ENST00000604164 PDXKO00764 312 aa12.44□□□□□ -0.42
CCDC12-209ENST00000604164 PPEF2O14830 753 aa12.44□□□□□ -0.42
CCDC12-209ENST00000604164 CLIC2O15247 247 aa12.44□□□□□ -0.42
CCDC12-209ENST00000604164 SPTLC1O15269 473 aa12.44□□□□□ -0.42
CCDC12-209ENST00000604164 SMC2O95347 1197 aa12.44□□□□□ -0.42
CCDC12-209ENST00000604164 TNNI1P19237 187 aa12.44□□□□□ -0.42
CCDC12-209ENST00000604164 ANP32AP39687 249 aaKnown RBP12.44□□□□□ -0.42
CCDC12-209ENST00000604164 ALDH1A3P47895 512 aa12.44□□□□□ -0.42
CCDC12-209ENST00000604164 AP3M2P53677 418 aa12.44□□□□□ -0.42
CCDC12-209ENST00000604164 FAM160A1Q05DH4 1040 aa12.44□□□□□ -0.42
CCDC12-209ENST00000604164 CYP24A1Q07973 514 aa12.44□□□□□ -0.42
CCDC12-209ENST00000604164 DPYDQ12882 1025 aa12.44□□□□□ -0.42
CCDC12-209ENST00000604164 BFSP1Q12934 665 aa12.44□□□□□ -0.42
CCDC12-209ENST00000604164 STK4Q13043 487 aa12.44□□□□□ -0.42
CCDC12-209ENST00000604164 PSMD6Q15008 389 aa12.44□□□□□ -0.42
CCDC12-209ENST00000604164 TRIM67Q6ZTA4 783 aa12.44□□□□□ -0.42
CCDC12-209ENST00000604164 MTSS1LQ765P7 747 aa12.44□□□□□ -0.42
CCDC12-209ENST00000604164 GET4Q7L5D6 327 aaPredicted RBP12.44□□□□□ -0.42
CCDC12-209ENST00000604164 SLC9A9Q8IVB4 645 aa12.44□□□□□ -0.42
CCDC12-209ENST00000604164 DCP1BQ8IZD4 617 aaKnown RBP12.44□□□□□ -0.42
CCDC12-209ENST00000604164 ZSWIM2Q8NEG5 633 aa12.44□□□□□ -0.42
CCDC12-209ENST00000604164 ZNF512Q96ME7 567 aaPredicted RBP12.44□□□□□ -0.42
CCDC12-209ENST00000604164 MTMR12Q9C0I1 747 aa12.44□□□□□ -0.42
CCDC12-209ENST00000604164 GOLPH3LQ9H4A5 285 aa12.44□□□□□ -0.42
CCDC12-209ENST00000604164 GDAP2Q9NXN4 497 aa12.44□□□□□ -0.42
CCDC12-209ENST00000604164 CDH7Q9ULB5 785 aa12.44□□□□□ -0.42
CCDC12-209ENST00000604164 FRMD4BQ9Y2L6 1034 aa12.44□□□□□ -0.42
CCDC12-209ENST00000604164 HCN4Q9Y3Q4 1203 aa12.44□□□□□ -0.42
CCDC12-209ENST00000604164 TMEM221A6NGB7 291 aa12.43□□□□□ -0.42
CCDC12-209ENST00000604164 M0R296 226 aa12.43□□□□□ -0.42
CCDC12-209ENST00000604164 MICAL2O94851 1124 aa12.43□□□□□ -0.42
CCDC12-209ENST00000604164 FGF19O95750 216 aa12.43□□□□□ -0.42
CCDC12-209ENST00000604164 DLATP10515 647 aaKnown RBP12.43□□□□□ -0.42
CCDC12-209ENST00000604164 LAMP2P13473 410 aa12.43□□□□□ -0.42
CCDC12-209ENST00000604164 RPL13P26373 211 aaKnown RBP12.43□□□□□ -0.42
CCDC12-209ENST00000604164 LHX1P48742 406 aa12.43□□□□□ -0.42
CCDC12-209ENST00000604164 TUFMP49411 452 aaKnown RBP12.43□□□□□ -0.42
CCDC12-209ENST00000604164 EPHB3P54753 998 aa12.43□□□□□ -0.42
CCDC12-209ENST00000604164 TSPY1Q01534 308 aa12.43□□□□□ -0.42
CCDC12-209ENST00000604164 TDGQ13569 410 aa12.43□□□□□ -0.42
CCDC12-209ENST00000604164 CYP4A22Q5TCH4 519 aa12.43□□□□□ -0.42
CCDC12-209ENST00000604164 RNF19BQ6ZMZ0 732 aa12.43□□□□□ -0.42
CCDC12-209ENST00000604164 DPH6Q7L8W6 267 aa12.43□□□□□ -0.42
CCDC12-209ENST00000604164 BMP8AQ7Z5Y6 402 aa12.43□□□□□ -0.42
CCDC12-209ENST00000604164 FMR1NBQ8N0W7 255 aaPredicted RBP12.43□□□□□ -0.42
CCDC12-209ENST00000604164 TOP6BLQ8N6T0 577 aa12.43□□□□□ -0.42
CCDC12-209ENST00000604164 RDH13Q8NBN7 331 aa12.43□□□□□ -0.42
CCDC12-209ENST00000604164 KIAA0895Q8NCT3 520 aa12.43□□□□□ -0.42
CCDC12-209ENST00000604164 TIGD1Q96MW7 591 aa12.43□□□□□ -0.42
CCDC12-209ENST00000604164 CGRRF1Q99675 332 aa12.43□□□□□ -0.42
CCDC12-209ENST00000604164 KCNK12Q9HB15 430 aa12.43□□□□□ -0.42
CCDC12-209ENST00000604164 GDE1Q9NZC3 331 aa12.43□□□□□ -0.42
CCDC12-209ENST00000604164 MRPS23Q9Y3D9 190 aaKnown RBP12.43□□□□□ -0.42
CCDC12-209ENST00000604164 ASB3Q9Y575 518 aa12.43□□□□□ -0.42
CCDC12-209ENST00000604164 DENND4AQ7Z401 1863 aa12.42□□□□□ -0.42
CCDC12-209ENST00000604164 MUC3AQ02505 3323 aa12.42□□□□□ -0.42
CCDC12-209ENST00000604164 FAM86C2PA6NEL3 165 aa12.42□□□□□ -0.42
CCDC12-209ENST00000604164 SEC24AO95486 1093 aa12.42□□□□□ -0.42
CCDC12-209ENST00000604164 NR3C1P04150 777 aa12.42□□□□□ -0.42
CCDC12-209ENST00000604164 RHOP08100 348 aa12.42□□□□□ -0.42
CCDC12-209ENST00000604164 PCSK1P29120 753 aa12.42□□□□□ -0.42
CCDC12-209ENST00000604164 MYL7Q01449 175 aa12.42□□□□□ -0.42
CCDC12-209ENST00000604164 TWF1Q12792 350 aa12.42□□□□□ -0.42
CCDC12-209ENST00000604164 TRPC3Q13507 836 aa12.42□□□□□ -0.42
CCDC12-209ENST00000604164 VEPH1Q14D04 833 aa12.42□□□□□ -0.42
CCDC12-209ENST00000604164 NFE2Q16621 373 aaPredicted RBP12.42□□□□□ -0.42
CCDC12-209ENST00000604164 WSCD1Q658N2 575 aa12.42□□□□□ -0.42
CCDC12-209ENST00000604164 PDZD4Q76G19 769 aaPredicted RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms