RNA–Protein interactions for RNA: ENST00000603722.1

TUBE1-206, Transcript of tubulin epsilon 1, humanhuman

TSL 2

Gene TUBE1, Length 613 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-206ENST00000603722 GDE1Q9NZC3 331 aa17.71■□□□□ 0.43
TUBE1-206ENST00000603722 CEP72Q9P209 647 aa17.71■□□□□ 0.43
TUBE1-206ENST00000603722 GOLGA8IPA6NC78 632 aa17.7■□□□□ 0.42
TUBE1-206ENST00000603722 GOLGA8JA6NMD2 632 aa17.7■□□□□ 0.42
TUBE1-206ENST00000603722 NRG2O14511 850 aaPredicted RBP17.7■□□□□ 0.42
TUBE1-206ENST00000603722 CCR2P41597 374 aa17.7■□□□□ 0.42
TUBE1-206ENST00000603722 ME1P48163 572 aa17.7■□□□□ 0.42
TUBE1-206ENST00000603722 TFAMQ00059 246 aaKnown RBP17.7■□□□□ 0.42
TUBE1-206ENST00000603722 DUSP4Q13115 394 aa17.7■□□□□ 0.42
TUBE1-206ENST00000603722 GPR17Q13304 367 aa17.7■□□□□ 0.42
TUBE1-206ENST00000603722 MYBPC2Q14324 1141 aa17.7■□□□□ 0.42
TUBE1-206ENST00000603722 ARMCX5Q6P1M9 558 aa17.7■□□□□ 0.42
TUBE1-206ENST00000603722 POTEHQ6S545 545 aa17.7■□□□□ 0.42
TUBE1-206ENST00000603722 OR10T2Q8NGX3 314 aa17.7■□□□□ 0.42
TUBE1-206ENST00000603722 ATOH1Q92858 354 aaPredicted RBP17.7■□□□□ 0.42
TUBE1-206ENST00000603722 ZNF512Q96ME7 567 aaPredicted RBP17.7■□□□□ 0.42
TUBE1-206ENST00000603722 PCIF1Q9H4Z3 704 aa17.7■□□□□ 0.42
TUBE1-206ENST00000603722 TBC1D17Q9HA65 648 aa17.7■□□□□ 0.42
TUBE1-206ENST00000603722 ASAH2Q9NR71 780 aa17.7■□□□□ 0.42
TUBE1-206ENST00000603722 MTMR11A4FU01 709 aa17.69■□□□□ 0.42
TUBE1-206ENST00000603722 CYB561D2O14569 222 aa17.69■□□□□ 0.42
TUBE1-206ENST00000603722 ZNF197O14709 1029 aa17.69■□□□□ 0.42
TUBE1-206ENST00000603722 POLR2DO15514 142 aaKnown RBP17.69■□□□□ 0.42
TUBE1-206ENST00000603722 EXTL3O43909 919 aa17.69■□□□□ 0.42
TUBE1-206ENST00000603722 LDHAP00338 332 aaKnown RBP17.69■□□□□ 0.42
TUBE1-206ENST00000603722 CYP11A1P05108 521 aa17.69■□□□□ 0.42
TUBE1-206ENST00000603722 AMPD3Q01432 767 aa17.69■□□□□ 0.42
TUBE1-206ENST00000603722 DNM1Q05193 864 aaKnown RBP17.69■□□□□ 0.42
TUBE1-206ENST00000603722 CYP4A22Q5TCH4 519 aa17.69■□□□□ 0.42
TUBE1-206ENST00000603722 STXBP4Q6ZWJ1 553 aa17.69■□□□□ 0.42
TUBE1-206ENST00000603722 NT5DC4Q86YG4 428 aa17.69■□□□□ 0.42
TUBE1-206ENST00000603722 ATAD1Q8NBU5 361 aa17.69■□□□□ 0.42
TUBE1-206ENST00000603722 FAM84AQ96KN4 292 aa17.69■□□□□ 0.42
TUBE1-206ENST00000603722 ZNF560Q96MR9 790 aa17.69■□□□□ 0.42
TUBE1-206ENST00000603722 RTP3Q9BQQ7 232 aa17.69■□□□□ 0.42
TUBE1-206ENST00000603722 IRF2BPLQ9H1B7 796 aa17.69■□□□□ 0.42
TUBE1-206ENST00000603722 DSEQ9UL01 958 aa17.69■□□□□ 0.42
TUBE1-206ENST00000603722 PCDHA7Q9UN72 937 aa17.69■□□□□ 0.42
TUBE1-206ENST00000603722 SLC27A5Q9Y2P5 690 aa17.69■□□□□ 0.42
TUBE1-206ENST00000603722 MYL4P12829 197 aa17.68■□□□□ 0.42
TUBE1-206ENST00000603722 GJA1P17302 382 aa17.68■□□□□ 0.42
TUBE1-206ENST00000603722 POLR2BP30876 1174 aaKnown RBP17.68■□□□□ 0.42
TUBE1-206ENST00000603722 CDR1P51861 262 aa17.68■□□□□ 0.42
TUBE1-206ENST00000603722 PLD1Q13393 1074 aa17.68■□□□□ 0.42
TUBE1-206ENST00000603722 SV2CQ496J9 727 aa17.68■□□□□ 0.42
TUBE1-206ENST00000603722 CENPPQ6IPU0 288 aa17.68■□□□□ 0.42
TUBE1-206ENST00000603722 METTL23Q86XA0 190 aa17.68■□□□□ 0.42
TUBE1-206ENST00000603722 CCDC105Q8IYK2 499 aa17.68■□□□□ 0.42
TUBE1-206ENST00000603722 TTC9BQ8N6N2 239 aa17.68■□□□□ 0.42
TUBE1-206ENST00000603722 C1orf127Q8N9H9 656 aa17.68■□□□□ 0.42
TUBE1-206ENST00000603722 FAM13BQ9NYF5 915 aa17.68■□□□□ 0.42
TUBE1-206ENST00000603722 MYO15AQ9UKN7 3530 aa17.68■□□□□ 0.42
TUBE1-206ENST00000603722 MYH11P35749 1972 aa17.68■□□□□ 0.42
TUBE1-206ENST00000603722 ZDBF2Q9HCK1 2354 aa17.67■□□□□ 0.42
TUBE1-206ENST00000603722 KPNA7A9QM74 516 aa17.67■□□□□ 0.42
TUBE1-206ENST00000603722 MOSPD3O75425 235 aa17.67■□□□□ 0.42
TUBE1-206ENST00000603722 ECI2O75521 394 aa17.67■□□□□ 0.42
TUBE1-206ENST00000603722 SOAT2O75908 522 aa17.67■□□□□ 0.42
TUBE1-206ENST00000603722 MICAL2O94851 1124 aa17.67■□□□□ 0.42
TUBE1-206ENST00000603722 ITGB3P05106 788 aa17.67■□□□□ 0.42
TUBE1-206ENST00000603722 FCARP24071 287 aa17.67■□□□□ 0.42
TUBE1-206ENST00000603722 CASP1P29466 404 aa17.67■□□□□ 0.42
TUBE1-206ENST00000603722 ALDH1A3P47895 512 aa17.67■□□□□ 0.42
TUBE1-206ENST00000603722 EPHB3P54753 998 aa17.67■□□□□ 0.42
TUBE1-206ENST00000603722 EPHA5P54756 1037 aa17.67■□□□□ 0.42
TUBE1-206ENST00000603722 SNW1Q13573 536 aaKnown RBP17.67■□□□□ 0.42
TUBE1-206ENST00000603722 SLC39A12Q504Y0 691 aa17.67■□□□□ 0.42
TUBE1-206ENST00000603722 FAM78AQ5JUQ0 283 aa17.67■□□□□ 0.42
TUBE1-206ENST00000603722 FAM26FQ5R3K3 315 aa17.67■□□□□ 0.42
TUBE1-206ENST00000603722 RESP18Q5W5W9 173 aa17.67■□□□□ 0.42
TUBE1-206ENST00000603722 WSCD1Q658N2 575 aa17.67■□□□□ 0.42
TUBE1-206ENST00000603722 ATL3Q6DD88 541 aa17.67■□□□□ 0.42
TUBE1-206ENST00000603722 TANGO2Q6ICL3 276 aa17.67■□□□□ 0.42
TUBE1-206ENST00000603722 GPD1LQ8N335 351 aa17.67■□□□□ 0.42
TUBE1-206ENST00000603722 LEMD2Q8NC56 503 aa17.67■□□□□ 0.42
TUBE1-206ENST00000603722 BORCS6Q96GS4 357 aa17.67■□□□□ 0.42
TUBE1-206ENST00000603722 C7orf25Q9BPX7 421 aa17.67■□□□□ 0.42
TUBE1-206ENST00000603722 PLA2G2FQ9BZM2 168 aa17.67■□□□□ 0.42
TUBE1-206ENST00000603722 ZCWPW1Q9H0M4 648 aa17.67■□□□□ 0.42
TUBE1-206ENST00000603722 DNAJC25Q9H1X3 360 aa17.67■□□□□ 0.42
TUBE1-206ENST00000603722 BLZF1Q9H2G9 400 aa17.67■□□□□ 0.42
TUBE1-206ENST00000603722 MAGEF1Q9HAY2 307 aa17.67■□□□□ 0.42
TUBE1-206ENST00000603722 CFAP45Q9UL16 551 aa17.67■□□□□ 0.42
TUBE1-206ENST00000603722 AGAP1Q9UPQ3 857 aa17.67■□□□□ 0.42
TUBE1-206ENST00000603722 CITO14578 2027 aa17.67■□□□□ 0.42
TUBE1-206ENST00000603722 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.66■□□□□ 0.42
TUBE1-206ENST00000603722 EIF3DO15371 548 aaKnown RBP eCLIP17.66■□□□□ 0.42
TUBE1-206ENST00000603722 DCNP07585 359 aaKnown RBP17.66■□□□□ 0.42
TUBE1-206ENST00000603722 HOXD13P35453 343 aa17.66■□□□□ 0.42
TUBE1-206ENST00000603722 PNPLA4P41247 253 aa17.66■□□□□ 0.42
TUBE1-206ENST00000603722 PFKPQ01813 784 aa17.66■□□□□ 0.42
TUBE1-206ENST00000603722 LMBRD2Q68DH5 695 aaPredicted RBP17.66■□□□□ 0.42
TUBE1-206ENST00000603722 PHLDB3Q6NSJ2 640 aa17.66■□□□□ 0.42
TUBE1-206ENST00000603722 CNNM4Q6P4Q7 775 aa17.66■□□□□ 0.42
TUBE1-206ENST00000603722 UNC13DQ70J99 1090 aa17.66■□□□□ 0.42
TUBE1-206ENST00000603722 TMC8Q8IU68 726 aa17.66■□□□□ 0.42
TUBE1-206ENST00000603722 THEM5Q8N1Q8 247 aa17.66■□□□□ 0.42
TUBE1-206ENST00000603722 DTWD2Q8NBA8 298 aa17.66■□□□□ 0.42
TUBE1-206ENST00000603722 ELSPBP1Q96BH3 223 aa17.66■□□□□ 0.42
TUBE1-206ENST00000603722 ZSWIM3Q96MP5 696 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms