RNA–Protein interactions for RNA: ENST00000602088.7

SSBP4-213, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-213ENST00000602088 ZNF560Q96MR9 790 aa18.04■□□□□ 0.48
SSBP4-213ENST00000602088 HOOK1Q9UJC3 728 aaKnown RBP18.04■□□□□ 0.48
SSBP4-213ENST00000602088 DSEQ9UL01 958 aa18.04■□□□□ 0.48
SSBP4-213ENST00000602088 NR2E1Q9Y466 385 aa18.04■□□□□ 0.48
SSBP4-213ENST00000602088 CALUO43852 315 aaPredicted RBP18.03■□□□□ 0.48
SSBP4-213ENST00000602088 KINO60870 393 aaKnown RBP18.03■□□□□ 0.48
SSBP4-213ENST00000602088 PRPF40AO75400 957 aaKnown RBP18.03■□□□□ 0.48
SSBP4-213ENST00000602088 SMC2O95347 1197 aa18.03■□□□□ 0.48
SSBP4-213ENST00000602088 TNNC2P02585 160 aa18.03■□□□□ 0.48
SSBP4-213ENST00000602088 NR3C1P04150 777 aa18.03■□□□□ 0.48
SSBP4-213ENST00000602088 DLATP10515 647 aaKnown RBP18.03■□□□□ 0.48
SSBP4-213ENST00000602088 TNNI1P19237 187 aa18.03■□□□□ 0.48
SSBP4-213ENST00000602088 PPM1LQ5SGD2 360 aa18.03■□□□□ 0.48
SSBP4-213ENST00000602088 CCDC149Q6ZUS6 474 aa18.03■□□□□ 0.48
SSBP4-213ENST00000602088 RNF135Q8IUD6 432 aa18.03■□□□□ 0.48
SSBP4-213ENST00000602088 ERCC4Q92889 916 aaPredicted RBP18.03■□□□□ 0.48
SSBP4-213ENST00000602088 SMARCE1Q969G3 411 aa18.03■□□□□ 0.48
SSBP4-213ENST00000602088 CCDC127Q96BQ5 260 aa18.03■□□□□ 0.48
SSBP4-213ENST00000602088 FNBP1Q96RU3 617 aa18.03■□□□□ 0.48
SSBP4-213ENST00000602088 CGRRF1Q99675 332 aa18.03■□□□□ 0.48
SSBP4-213ENST00000602088 WDR6Q9NNW5 1121 aaKnown RBP18.03■□□□□ 0.48
SSBP4-213ENST00000602088 USTQ9Y2C2 406 aa18.03■□□□□ 0.48
SSBP4-213ENST00000602088 DENND4AQ7Z401 1863 aa18.03■□□□□ 0.48
SSBP4-213ENST00000602088 OR6C75A6NL08 312 aa18.02■□□□□ 0.48
SSBP4-213ENST00000602088 C2CD4DB7Z1M9 353 aa18.02■□□□□ 0.48
SSBP4-213ENST00000602088 KRT19P08727 400 aa18.02■□□□□ 0.48
SSBP4-213ENST00000602088 CPB1P15086 417 aa18.02■□□□□ 0.48
SSBP4-213ENST00000602088 SP100P23497 879 aaPredicted RBP18.02■□□□□ 0.48
SSBP4-213ENST00000602088 CASP4P49662 377 aa18.02■□□□□ 0.48
SSBP4-213ENST00000602088 GPR17Q13304 367 aa18.02■□□□□ 0.48
SSBP4-213ENST00000602088 NFIL3Q16649 462 aa18.02■□□□□ 0.48
SSBP4-213ENST00000602088 ZNF658Q5TYW1 1059 aaPredicted RBP18.02■□□□□ 0.48
SSBP4-213ENST00000602088 TRAPPC11Q7Z392 1133 aa18.02■□□□□ 0.48
SSBP4-213ENST00000602088 TCEAL8Q8IYN2 117 aa18.02■□□□□ 0.48
SSBP4-213ENST00000602088 SMYD4Q8IYR2 804 aaPredicted RBP18.02■□□□□ 0.48
SSBP4-213ENST00000602088 PLEKHO2Q8TD55 490 aa18.02■□□□□ 0.48
SSBP4-213ENST00000602088 PARD3BQ8TEW8 1205 aa18.02■□□□□ 0.48
SSBP4-213ENST00000602088 ZNF516Q92618 1163 aa18.02■□□□□ 0.48
SSBP4-213ENST00000602088 PIDD1Q9HB75 910 aa18.02■□□□□ 0.48
SSBP4-213ENST00000602088 TSHZ2Q9NRE2 1034 aa18.02■□□□□ 0.48
SSBP4-213ENST00000602088 GDAP2Q9NXN4 497 aa18.02■□□□□ 0.48
SSBP4-213ENST00000602088 AFF4Q9UHB7 1163 aaKnown RBP18.02■□□□□ 0.48
SSBP4-213ENST00000602088 MAFFQ9ULX9 164 aa18.02■□□□□ 0.48
SSBP4-213ENST00000602088 TSC2P49815 1807 aa18.02■□□□□ 0.47
SSBP4-213ENST00000602088 CCL16O15467 120 aa18.01■□□□□ 0.47
SSBP4-213ENST00000602088 SEC24AO95486 1093 aa18.01■□□□□ 0.47
SSBP4-213ENST00000602088 POU2F2P09086 479 aa18.01■□□□□ 0.47
SSBP4-213ENST00000602088 OR4Q2P0C623 313 aa18.01■□□□□ 0.47
SSBP4-213ENST00000602088 ELF1P32519 619 aa18.01■□□□□ 0.47
SSBP4-213ENST00000602088 UBE2HP62256 183 aa18.01■□□□□ 0.47
SSBP4-213ENST00000602088 BFSP1Q12934 665 aa18.01■□□□□ 0.47
SSBP4-213ENST00000602088 ZCWPW2Q504Y3 356 aa18.01■□□□□ 0.47
SSBP4-213ENST00000602088 COBLL1Q53SF7 1204 aa18.01■□□□□ 0.47
SSBP4-213ENST00000602088 WSCD1Q658N2 575 aa18.01■□□□□ 0.47
SSBP4-213ENST00000602088 RNF19BQ6ZMZ0 732 aa18.01■□□□□ 0.47
SSBP4-213ENST00000602088 METTL23Q86XA0 190 aa18.01■□□□□ 0.47
SSBP4-213ENST00000602088 RTP3Q9BQQ7 232 aa18.01■□□□□ 0.47
SSBP4-213ENST00000602088 R3HCC1Q9Y3T6 440 aaKnown RBP18.01■□□□□ 0.47
SSBP4-213ENST00000602088 CLUHO75153 1309 aa18■□□□□ 0.47
SSBP4-213ENST00000602088 PI4K2BG5E9Z4 385 aa18■□□□□ 0.47
SSBP4-213ENST00000602088 PRRG1O14668 218 aa18■□□□□ 0.47
SSBP4-213ENST00000602088 HUS1O60921 280 aa18■□□□□ 0.47
SSBP4-213ENST00000602088 XYLBO75191 536 aa18■□□□□ 0.47
SSBP4-213ENST00000602088 CST3P01034 146 aaPredicted RBP18■□□□□ 0.47
SSBP4-213ENST00000602088 NR2F2P24468 414 aa18■□□□□ 0.47
SSBP4-213ENST00000602088 PRCPP42785 496 aa18■□□□□ 0.47
SSBP4-213ENST00000602088 CLDN10P78369 228 aa18■□□□□ 0.47
SSBP4-213ENST00000602088 ADCY1Q08828 1119 aa18■□□□□ 0.47
SSBP4-213ENST00000602088 MYO1EQ12965 1108 aa18■□□□□ 0.47
SSBP4-213ENST00000602088 CLEC17AQ6ZS10 378 aa18■□□□□ 0.47
SSBP4-213ENST00000602088 OTOP3Q7RTS5 596 aa18■□□□□ 0.47
SSBP4-213ENST00000602088 GRASPQ7Z6J2 395 aaPredicted RBP18■□□□□ 0.47
SSBP4-213ENST00000602088 THEM5Q8N1Q8 247 aa18■□□□□ 0.47
SSBP4-213ENST00000602088 HPDLQ96IR7 371 aa18■□□□□ 0.47
SSBP4-213ENST00000602088 GTPBP4Q9BZE4 634 aaKnown RBP18■□□□□ 0.47
SSBP4-213ENST00000602088 EPHX3Q9H6B9 360 aa18■□□□□ 0.47
SSBP4-213ENST00000602088 CYP4F11Q9HBI6 524 aa18■□□□□ 0.47
SSBP4-213ENST00000602088 L1RE1Q9UN81 338 aa18■□□□□ 0.47
SSBP4-213ENST00000602088 FRMD4BQ9Y2L6 1034 aa18■□□□□ 0.47
SSBP4-213ENST00000602088 DOCK6Q96HP0 2047 aa17.99■□□□□ 0.47
SSBP4-213ENST00000602088 LRRIQ3A6PVS8 624 aaPredicted RBP17.99■□□□□ 0.47
SSBP4-213ENST00000602088 MAPK13O15264 365 aa17.99■□□□□ 0.47
SSBP4-213ENST00000602088 N4BP1O75113 896 aaKnown RBP17.99■□□□□ 0.47
SSBP4-213ENST00000602088 VNN2O95498 520 aa17.99■□□□□ 0.47
SSBP4-213ENST00000602088 AP3M2P53677 418 aa17.99■□□□□ 0.47
SSBP4-213ENST00000602088 EDRF1Q3B7T1 1238 aa17.99■□□□□ 0.47
SSBP4-213ENST00000602088 CEP135Q66GS9 1140 aa17.99■□□□□ 0.47
SSBP4-213ENST00000602088 ZDHHC14Q8IZN3 488 aa17.99■□□□□ 0.47
SSBP4-213ENST00000602088 PLCD3Q8N3E9 789 aa17.99■□□□□ 0.47
SSBP4-213ENST00000602088 PDCL2Q8N4E4 241 aa17.99■□□□□ 0.47
SSBP4-213ENST00000602088 TDRD5Q8NAT2 981 aaKnown RBP17.99■□□□□ 0.47
SSBP4-213ENST00000602088 OR10T2Q8NGX3 314 aa17.99■□□□□ 0.47
SSBP4-213ENST00000602088 TMC2Q8TDI7 906 aa17.99■□□□□ 0.47
SSBP4-213ENST00000602088 ACSF2Q96CM8 615 aaPredicted RBP17.99■□□□□ 0.47
SSBP4-213ENST00000602088 TMEM209Q96SK2 561 aa17.99■□□□□ 0.47
SSBP4-213ENST00000602088 MUTYHQ9UIF7 546 aa17.99■□□□□ 0.47
SSBP4-213ENST00000602088 POLIQ9UNA4 740 aa17.99■□□□□ 0.47
SSBP4-213ENST00000602088 INSL5Q9Y5Q6 135 aa17.99■□□□□ 0.47
SSBP4-213ENST00000602088 SNX9Q9Y5X1 595 aa17.99■□□□□ 0.47
SSBP4-213ENST00000602088 DCXO43602 365 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms