RNA–Protein interactions for RNA: ENST00000601319.1

HERC3-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 1,298 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-214ENST00000601319 ITGB3P05106 788 aa18.55■□□□□ 0.56
HERC3-214ENST00000601319 ELF1P32519 619 aa18.55■□□□□ 0.56
HERC3-214ENST00000601319 STK4Q13043 487 aa18.55■□□□□ 0.56
HERC3-214ENST00000601319 GRASPQ7Z6J2 395 aaPredicted RBP18.55■□□□□ 0.56
HERC3-214ENST00000601319 XXYLT1Q8NBI6 393 aa18.55■□□□□ 0.56
HERC3-214ENST00000601319 BORCS6Q96GS4 357 aa18.55■□□□□ 0.56
HERC3-214ENST00000601319 AVENQ9NQS1 362 aaPredicted RBP18.55■□□□□ 0.56
HERC3-214ENST00000601319 INTS13Q9NVM9 706 aa18.55■□□□□ 0.56
HERC3-214ENST00000601319 IGSF9Q9P2J2 1179 aa18.55■□□□□ 0.56
HERC3-214ENST00000601319 PTPRJQ12913 1337 aa18.54■□□□□ 0.56
HERC3-214ENST00000601319 KPNA7A9QM74 516 aa18.54■□□□□ 0.56
HERC3-214ENST00000601319 RHOBTB3O94955 611 aa18.54■□□□□ 0.56
HERC3-214ENST00000601319 SEC24AO95486 1093 aa18.54■□□□□ 0.56
HERC3-214ENST00000601319 LRG1P02750 347 aa18.54■□□□□ 0.56
HERC3-214ENST00000601319 RPN1P04843 607 aaKnown RBP18.54■□□□□ 0.56
HERC3-214ENST00000601319 TMEM191BP0C7N4 346 aa18.54■□□□□ 0.56
HERC3-214ENST00000601319 FSHRP23945 695 aa18.54■□□□□ 0.56
HERC3-214ENST00000601319 POLR2BP30876 1174 aaKnown RBP18.54■□□□□ 0.56
HERC3-214ENST00000601319 GBP2P32456 591 aaPredicted RBP18.54■□□□□ 0.56
HERC3-214ENST00000601319 ARPP19P56211 112 aa18.54■□□□□ 0.56
HERC3-214ENST00000601319 DPYDQ12882 1025 aa18.54■□□□□ 0.56
HERC3-214ENST00000601319 GPR17Q13304 367 aa18.54■□□□□ 0.56
HERC3-214ENST00000601319 GET4Q7L5D6 327 aaPredicted RBP18.54■□□□□ 0.56
HERC3-214ENST00000601319 BMP8AQ7Z5Y6 402 aa18.54■□□□□ 0.56
HERC3-214ENST00000601319 WDR49Q8IV35 697 aa18.54■□□□□ 0.56
HERC3-214ENST00000601319 NOC3LQ8WTT2 800 aaKnown RBP18.54■□□□□ 0.56
HERC3-214ENST00000601319 NXPE3Q969Y0 559 aa18.54■□□□□ 0.56
HERC3-214ENST00000601319 MYADMQ96S97 322 aa18.54■□□□□ 0.56
HERC3-214ENST00000601319 MTMR12Q9C0I1 747 aa18.54■□□□□ 0.56
HERC3-214ENST00000601319 CYP4F11Q9HBI6 524 aa18.54■□□□□ 0.56
HERC3-214ENST00000601319 LIMD1Q9UGP4 676 aa18.54■□□□□ 0.56
HERC3-214ENST00000601319 PTPRDP23468 1912 aa18.53■□□□□ 0.56
HERC3-214ENST00000601319 DENND4CQ5VZ89 1909 aa18.53■□□□□ 0.56
HERC3-214ENST00000601319 TMEM221A6NGB7 291 aa18.53■□□□□ 0.56
HERC3-214ENST00000601319 M0R296 226 aa18.53■□□□□ 0.56
HERC3-214ENST00000601319 CYB561D2O14569 222 aa18.53■□□□□ 0.56
HERC3-214ENST00000601319 ZNF202O95125 648 aa18.53■□□□□ 0.56
HERC3-214ENST00000601319 ASGR2P07307 311 aa18.53■□□□□ 0.56
HERC3-214ENST00000601319 LAMP2P13473 410 aa18.53■□□□□ 0.56
HERC3-214ENST00000601319 ADCY1Q08828 1119 aa18.53■□□□□ 0.56
HERC3-214ENST00000601319 PSMD6Q15008 389 aa18.53■□□□□ 0.56
HERC3-214ENST00000601319 PABPC1LQ4VXU2 614 aaKnown RBP18.53■□□□□ 0.56
HERC3-214ENST00000601319 RNF19BQ6ZMZ0 732 aa18.53■□□□□ 0.56
HERC3-214ENST00000601319 METTL23Q86XA0 190 aa18.53■□□□□ 0.56
HERC3-214ENST00000601319 CCDC47Q96A33 483 aaKnown RBP18.53■□□□□ 0.56
HERC3-214ENST00000601319 ASIC4Q96FT7 647 aa18.53■□□□□ 0.56
HERC3-214ENST00000601319 CCDC34Q96HJ3 373 aa18.53■□□□□ 0.56
HERC3-214ENST00000601319 ANKRD36BP1Q96IX9 119 aa18.53■□□□□ 0.56
HERC3-214ENST00000601319 GDAP2Q9NXN4 497 aa18.53■□□□□ 0.56
HERC3-214ENST00000601319 HSFX1Q9UBD0 423 aa18.53■□□□□ 0.56
HERC3-214ENST00000601319 SIX4Q9UIU6 781 aa18.53■□□□□ 0.56
HERC3-214ENST00000601319 CIZ1Q9ULV3 898 aaPredicted RBP18.53■□□□□ 0.56
HERC3-214ENST00000601319 POLIQ9UNA4 740 aa18.53■□□□□ 0.56
HERC3-214ENST00000601319 AGAP1Q9UPQ3 857 aa18.53■□□□□ 0.56
HERC3-214ENST00000601319 OBSL1O75147 1896 aa18.52■□□□□ 0.56
HERC3-214ENST00000601319 NUP210Q8TEM1 1887 aaPredicted RBP18.52■□□□□ 0.56
HERC3-214ENST00000601319 CLIC2O15247 247 aa18.52■□□□□ 0.56
HERC3-214ENST00000601319 PRPF40AO75400 957 aaKnown RBP18.52■□□□□ 0.56
HERC3-214ENST00000601319 VNN2O95498 520 aa18.52■□□□□ 0.56
HERC3-214ENST00000601319 TNNC2P02585 160 aa18.52■□□□□ 0.56
HERC3-214ENST00000601319 PRR29P0C7W0 189 aa18.52■□□□□ 0.56
HERC3-214ENST00000601319 CYP2J2P51589 502 aa18.52■□□□□ 0.56
HERC3-214ENST00000601319 RBP5P82980 135 aa18.52■□□□□ 0.56
HERC3-214ENST00000601319 CYP24A1Q07973 514 aa18.52■□□□□ 0.56
HERC3-214ENST00000601319 KCNB1Q14721 858 aa18.52■□□□□ 0.56
HERC3-214ENST00000601319 DUOXA2Q1HG44 320 aa18.52■□□□□ 0.56
HERC3-214ENST00000601319 SLC9A9Q8IVB4 645 aa18.52■□□□□ 0.56
HERC3-214ENST00000601319 FMR1NBQ8N0W7 255 aaPredicted RBP18.52■□□□□ 0.56
HERC3-214ENST00000601319 OR10T2Q8NGX3 314 aa18.52■□□□□ 0.56
HERC3-214ENST00000601319 SPATA18Q8TC71 538 aa18.52■□□□□ 0.56
HERC3-214ENST00000601319 KCTD10Q9H3F6 313 aa18.52■□□□□ 0.56
HERC3-214ENST00000601319 KCNK12Q9HB15 430 aa18.52■□□□□ 0.56
HERC3-214ENST00000601319 HCFC1R1Q9NWW0 138 aa18.52■□□□□ 0.56
HERC3-214ENST00000601319 DNMT3BQ9UBC3 853 aaKnown RBP18.52■□□□□ 0.56
HERC3-214ENST00000601319 ANHXE9PGG2 379 aa18.51■□□□□ 0.55
HERC3-214ENST00000601319 PDXKO00764 312 aa18.51■□□□□ 0.55
HERC3-214ENST00000601319 KIF20AO95235 890 aa18.51■□□□□ 0.55
HERC3-214ENST00000601319 OR4Q2P0C623 313 aa18.51■□□□□ 0.55
HERC3-214ENST00000601319 COL9A1P20849 921 aa18.51■□□□□ 0.55
HERC3-214ENST00000601319 NTHL1P78549 312 aa18.51■□□□□ 0.55
HERC3-214ENST00000601319 SMARCB1Q12824 385 aa18.51■□□□□ 0.55
HERC3-214ENST00000601319 PLD1Q13393 1074 aa18.51■□□□□ 0.55
HERC3-214ENST00000601319 TDGQ13569 410 aa18.51■□□□□ 0.55
HERC3-214ENST00000601319 HFE2Q6ZVN8 426 aa18.51■□□□□ 0.55
HERC3-214ENST00000601319 TMEM86AQ8N2M4 240 aa18.51■□□□□ 0.55
HERC3-214ENST00000601319 CSGALNACT2Q8N6G5 542 aa18.51■□□□□ 0.55
HERC3-214ENST00000601319 OR5B17Q8NGF7 314 aa18.51■□□□□ 0.55
HERC3-214ENST00000601319 MFSD14AQ96MC6 490 aa18.51■□□□□ 0.55
HERC3-214ENST00000601319 CGRRF1Q99675 332 aa18.51■□□□□ 0.55
HERC3-214ENST00000601319 RTP3Q9BQQ7 232 aa18.51■□□□□ 0.55
HERC3-214ENST00000601319 ZCWPW1Q9H0M4 648 aa18.51■□□□□ 0.55
HERC3-214ENST00000601319 CDH7Q9ULB5 785 aa18.51■□□□□ 0.55
HERC3-214ENST00000601319 YIPF1Q9Y548 306 aa18.51■□□□□ 0.55
HERC3-214ENST00000601319 WDFY4Q6ZS81 3184 aa18.51■□□□□ 0.55
HERC3-214ENST00000601319 MTMR11A4FU01 709 aa18.5■□□□□ 0.55
HERC3-214ENST00000601319 GOLGA6L4A6NEF3 574 aa18.5■□□□□ 0.55
HERC3-214ENST00000601319 MICAL2O94851 1124 aa18.5■□□□□ 0.55
HERC3-214ENST00000601319 RHOP08100 348 aa18.5■□□□□ 0.55
HERC3-214ENST00000601319 PTPN2P17706 415 aa18.5■□□□□ 0.55
HERC3-214ENST00000601319 MYO1EQ12965 1108 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms