RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 KIAA2013Q8IYS2 634 aa19.54■□□□□ 0.72
CHMP2A-208ENST00000601220 IRF7Q92985 503 aa19.54■□□□□ 0.72
CHMP2A-208ENST00000601220 TMEM209Q96SK2 561 aa19.54■□□□□ 0.72
CHMP2A-208ENST00000601220 SMC3Q9UQE7 1217 aa19.54■□□□□ 0.72
CHMP2A-208ENST00000601220 SLC27A5Q9Y2P5 690 aa19.54■□□□□ 0.72
CHMP2A-208ENST00000601220 MRPS17Q9Y2R5 130 aaKnown RBP19.54■□□□□ 0.72
CHMP2A-208ENST00000601220 STYXL1Q9Y6J8 313 aa19.54■□□□□ 0.72
CHMP2A-208ENST00000601220 CACNA1AO00555 2505 aa19.53■□□□□ 0.72
CHMP2A-208ENST00000601220 ANO9A1A5B4 782 aa19.53■□□□□ 0.72
CHMP2A-208ENST00000601220 MTMR11A4FU01 709 aa19.53■□□□□ 0.72
CHMP2A-208ENST00000601220 MAN2B1O00754 1011 aa19.53■□□□□ 0.72
CHMP2A-208ENST00000601220 KINO60870 393 aaKnown RBP19.53■□□□□ 0.72
CHMP2A-208ENST00000601220 TDGF1P13385 188 aa19.53■□□□□ 0.72
CHMP2A-208ENST00000601220 NMT1P30419 496 aaKnown RBP19.53■□□□□ 0.72
CHMP2A-208ENST00000601220 GDI1P31150 447 aa19.53■□□□□ 0.72
CHMP2A-208ENST00000601220 C9orf57Q5W0N0 161 aa19.53■□□□□ 0.72
CHMP2A-208ENST00000601220 OVOS1Q6IE37 1185 aa19.53■□□□□ 0.72
CHMP2A-208ENST00000601220 TSSK4Q6SA08 328 aa19.53■□□□□ 0.72
CHMP2A-208ENST00000601220 USP37Q86T82 979 aa19.53■□□□□ 0.72
CHMP2A-208ENST00000601220 ATAD1Q8NBU5 361 aa19.53■□□□□ 0.72
CHMP2A-208ENST00000601220 DEPDC1BQ8WUY9 529 aa19.53■□□□□ 0.72
CHMP2A-208ENST00000601220 SENP8Q96LD8 212 aa19.53■□□□□ 0.72
CHMP2A-208ENST00000601220 MKNK1Q9BUB5 465 aa19.53■□□□□ 0.72
CHMP2A-208ENST00000601220 MSTO1Q9BUK6 570 aa19.53■□□□□ 0.72
CHMP2A-208ENST00000601220 GPR88Q9GZN0 384 aa19.53■□□□□ 0.72
CHMP2A-208ENST00000601220 ZSCAN32Q9NX65 697 aa19.53■□□□□ 0.72
CHMP2A-208ENST00000601220 COL4A2P08572 1712 aa19.53■□□□□ 0.72
CHMP2A-208ENST00000601220 HEPACAM2A8MVW5 462 aa19.52■□□□□ 0.72
CHMP2A-208ENST00000601220 TISP43B9A030 160 aa19.52■□□□□ 0.72
CHMP2A-208ENST00000601220 XPOTO43592 962 aaKnown RBP19.52■□□□□ 0.72
CHMP2A-208ENST00000601220 BMP15O95972 392 aa19.52■□□□□ 0.72
CHMP2A-208ENST00000601220 NFICP08651 508 aa19.52■□□□□ 0.72
CHMP2A-208ENST00000601220 DDIT3P35638 169 aa19.52■□□□□ 0.72
CHMP2A-208ENST00000601220 MCM2P49736 904 aa19.52■□□□□ 0.72
CHMP2A-208ENST00000601220 SF3A1Q15459 793 aaKnown RBP19.52■□□□□ 0.72
CHMP2A-208ENST00000601220 ZC2HC1CQ53FD0 456 aaPredicted RBP19.52■□□□□ 0.72
CHMP2A-208ENST00000601220 GAREM2Q75VX8 874 aa19.52■□□□□ 0.72
CHMP2A-208ENST00000601220 TTC9BQ8N6N2 239 aa19.52■□□□□ 0.72
CHMP2A-208ENST00000601220 OR10T2Q8NGX3 314 aa19.52■□□□□ 0.72
CHMP2A-208ENST00000601220 LRRC3BQ96PB8 259 aa19.52■□□□□ 0.72
CHMP2A-208ENST00000601220 CHRDQ9H2X0 955 aa19.52■□□□□ 0.72
CHMP2A-208ENST00000601220 ST6GALNAC4Q9H4F1 302 aa19.52■□□□□ 0.72
CHMP2A-208ENST00000601220 DERAQ9Y315 318 aa19.52■□□□□ 0.72
CHMP2A-208ENST00000601220 PATJQ8NI35 1801 aa19.52■□□□□ 0.72
CHMP2A-208ENST00000601220 FRYLO94915 3013 aa19.51■□□□□ 0.71
CHMP2A-208ENST00000601220 MIA3Q5JRA6 1907 aa19.51■□□□□ 0.71
CHMP2A-208ENST00000601220 A0A1W2PRU2 124 aa19.51■□□□□ 0.71
CHMP2A-208ENST00000601220 CYP11A1P05108 521 aa19.51■□□□□ 0.71
CHMP2A-208ENST00000601220 PAX3P23760 479 aa19.51■□□□□ 0.71
CHMP2A-208ENST00000601220 EPHB3P54753 998 aa19.51■□□□□ 0.71
CHMP2A-208ENST00000601220 MLLT6P55198 1093 aaPredicted RBP19.51■□□□□ 0.71
CHMP2A-208ENST00000601220 FCHO2Q0JRZ9 810 aa19.51■□□□□ 0.71
CHMP2A-208ENST00000601220 PLD1Q13393 1074 aa19.51■□□□□ 0.71
CHMP2A-208ENST00000601220 STXBP5Q5T5C0 1151 aa19.51■□□□□ 0.71
CHMP2A-208ENST00000601220 USP49Q70CQ1 688 aa19.51■□□□□ 0.71
CHMP2A-208ENST00000601220 BRAPQ7Z569 592 aa19.51■□□□□ 0.71
CHMP2A-208ENST00000601220 DNAJB7Q7Z6W7 309 aaPredicted RBP19.51■□□□□ 0.71
CHMP2A-208ENST00000601220 ATRIPQ8WXE1 791 aa19.51■□□□□ 0.71
CHMP2A-208ENST00000601220 LARP4BQ92615 738 aaKnown RBP19.51■□□□□ 0.71
CHMP2A-208ENST00000601220 STRA6Q9BX79 667 aa19.51■□□□□ 0.71
CHMP2A-208ENST00000601220 CCSER1Q9C0I3 900 aa19.51■□□□□ 0.71
CHMP2A-208ENST00000601220 EPC1Q9H2F5 836 aa19.51■□□□□ 0.71
CHMP2A-208ENST00000601220 IKZF4Q9H2S9 585 aa19.51■□□□□ 0.71
CHMP2A-208ENST00000601220 HSFX1Q9UBD0 423 aa19.51■□□□□ 0.71
CHMP2A-208ENST00000601220 NDRG2Q9UN36 371 aaKnown RBP19.51■□□□□ 0.71
CHMP2A-208ENST00000601220 PIAS3Q9Y6X2 628 aa19.51■□□□□ 0.71
CHMP2A-208ENST00000601220 DMXL1Q9Y485 3027 aa19.5■□□□□ 0.71
CHMP2A-208ENST00000601220 ZNF263O14978 683 aa19.5■□□□□ 0.71
CHMP2A-208ENST00000601220 SOAT2O75908 522 aa19.5■□□□□ 0.71
CHMP2A-208ENST00000601220 CHRNB1P11230 501 aa19.5■□□□□ 0.71
CHMP2A-208ENST00000601220 ACOT2P49753 483 aa19.5■□□□□ 0.71
CHMP2A-208ENST00000601220 PTPAQ15257 358 aa19.5■□□□□ 0.71
CHMP2A-208ENST00000601220 CRELD2Q6UXH1 353 aaPredicted RBP19.5■□□□□ 0.71
CHMP2A-208ENST00000601220 ZNF720Q7Z2F6 126 aa19.5■□□□□ 0.71
CHMP2A-208ENST00000601220 FAM3CQ92520 227 aa19.5■□□□□ 0.71
CHMP2A-208ENST00000601220 PSMG2Q969U7 264 aa19.5■□□□□ 0.71
CHMP2A-208ENST00000601220 E2F7Q96AV8 911 aa19.5■□□□□ 0.71
CHMP2A-208ENST00000601220 FAM212AQ96EL1 285 aa19.5■□□□□ 0.71
CHMP2A-208ENST00000601220 EPSTI1Q96J88 318 aa19.5■□□□□ 0.71
CHMP2A-208ENST00000601220 ASB7Q9H672 318 aa19.5■□□□□ 0.71
CHMP2A-208ENST00000601220 LMAN1LQ9HAT1 526 aa19.5■□□□□ 0.71
CHMP2A-208ENST00000601220 C2CD2Q9Y426 696 aa19.5■□□□□ 0.71
CHMP2A-208ENST00000601220 ASB3Q9Y575 518 aa19.5■□□□□ 0.71
CHMP2A-208ENST00000601220 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.5■□□□□ 0.71
CHMP2A-208ENST00000601220 F5P12259 2224 aa19.49■□□□□ 0.71
CHMP2A-208ENST00000601220 PPP1R37O75864 691 aa19.49■□□□□ 0.71
CHMP2A-208ENST00000601220 KRT18P05783 430 aaKnown RBP19.49■□□□□ 0.71
CHMP2A-208ENST00000601220 ODC1P11926 461 aa19.49■□□□□ 0.71
CHMP2A-208ENST00000601220 ADSSP30520 456 aa19.49■□□□□ 0.71
CHMP2A-208ENST00000601220 ALDH1A3P47895 512 aa19.49■□□□□ 0.71
CHMP2A-208ENST00000601220 POU5F1Q01860 360 aaKnown RBP19.49■□□□□ 0.71
CHMP2A-208ENST00000601220 GAS6Q14393 721 aa19.49■□□□□ 0.71
CHMP2A-208ENST00000601220 TMEM132DQ14C87 1099 aa19.49■□□□□ 0.71
CHMP2A-208ENST00000601220 WDR44Q5JSH3 913 aa19.49■□□□□ 0.71
CHMP2A-208ENST00000601220 ARID3BQ8IVW6 561 aaPredicted RBP19.49■□□□□ 0.71
CHMP2A-208ENST00000601220 ZCWPW1Q9H0M4 648 aa19.49■□□□□ 0.71
CHMP2A-208ENST00000601220 ZHX3Q9H4I2 956 aa19.49■□□□□ 0.71
CHMP2A-208ENST00000601220 DLL3Q9NYJ7 618 aa19.49■□□□□ 0.71
CHMP2A-208ENST00000601220 MYH11P35749 1972 aa19.49■□□□□ 0.71
CHMP2A-208ENST00000601220 CHADO15335 359 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms